TCONS_00007762 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007762
Unique NameTCONS_00007762
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length366

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007762 ID=TCONS_00007762|Name=TCONS_00007762|organism=Clytia hemisphaerica|type=transcript|length=366bp
GCTCATTGGACATTGATATCCATTGTTGTCTAATCAATTTCTAATCGATA
TTTACAATCTTTTTGACCTCGATTAGCTATTGATTATATATTTTGATAGA
TAACTGATCGATTTATCTATTACGACTGTTTGATTGAGCGGGGAGAGTCT
GGATTAGAAATCTCTTAGAATagataattgataaaaatctCATAAGCTAA
TTGAgaccaaaaaaattatgagtatAGATTATATATAAATTATGAGTATA
gccagacagtgtcaatcgaacaactccGAACAAAAGTCCCAATCGAacaa
acgtaatcgaacgcggtCGAataattgagattcgattgtcaaacgtaatc
gaatctcaatcgaacg
Run BLAST on NCBI

transcript from alignment at sc0000079:290358..290723

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007762 ID=TCONS_00007762|Name=TCONS_00007762|organism=Clytia hemisphaerica|type=transcript|length=366bp|location=Sequence derived from alignment at sc0000079:290358..290723 (Clytia hemisphaerica)
cgttcgattgagattcgattacgtttgacaatcgaatctcaattatTCGa
ccgcgttcgattacgtttgtTCGATTGGGACTTTTGTTCggagttgttcg
attgacactgtctggcTATACTCATAATTTATATATAATCTatactcata
atttttttggtcTCAATTAGCTTATGagatttttatcaattatctATTCT
AAGAGATTTCTAATCCAGACTCTCCCCGCTCAATCAAACAGTCGTAATAG
ATAAATCGATCAGTTATCTATCAAAATATATAATCAATAGCTAATCGAGG
TCAAAAAGATTGTAAATATCGATTAGAAATTGATTAGACAACAATGGATA
TCAATGTCCAATGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004409XLOC_004409Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007762-exon-sc0000079-1491911889:290358..290723TCONS_00007762-exon-sc0000079-1491911889:290358..290723Clytia hemisphaericaexon
TCONS_00007762-exon-sc0000079-1510915933:290358..290723TCONS_00007762-exon-sc0000079-1510915933:290358..290723Clytia hemisphaericaexon
TCONS_00007762-exon-sc0000079-1575043694:290358..290723TCONS_00007762-exon-sc0000079-1575043694:290358..290723Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:290358..290723 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.451946	0.220359	0.767574	1.00127	2.74263	0.240807	0.871571	0.54397	0	0.707609	0.228941	0.752483	0.60115	0.31215	0.25663	0.275403	0	0.173872	0.240214	0.7541	0.436967	0.639411	0.518192	0	0.485234	0.86612	0	0	0.752437	1.27769
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007762 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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