|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3472277..3478938+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00865.0 ID=Blg00865.0|Name=Blg00865.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6662bp|location=Sequence derived from alignment at Sc0000003:3472277..3478938+ (Branchiostoma lanceolatum)
ATGCCGAGTCAAGTAGCCCGAGGGAGGAACCATTCCAACAAGGATGGTAA
GTACAAATGCTTTGTAAACGTTACACCCCCTTTTCTACTGAGGCTGCGAC
TGCTGAGCGACAACTGAACGACCAAACATCTAACAGATCGCTCAACGAAT
TTCATAGATAAAGAAAGCTTTTCTTTCTTAATATTTTTGTGGTTTGTTTG
TTGAAAAAATCATACTTTTAAGTCTTGCACATATTTCAAATGTGGAAAAT
GGGTTACACAAATCCAATTGTGGTCGCTGTGCGGTCGCCCAGTGATCGCC
GTCCAGTTGAAAGGGGTAAATTACTTTCCAGTAAACTTATTTTACTGATG
CAGAAAAAGCAGAAGCCAGTCTACGTTTATCATATATAATCACAATAAAT
ACTCTACCTTTCGTTAGTAGTACAGTGTACTGGTATTTGGACATCTTAAC
GTCATTGAAATGTTAGGCAAGTTTCCAAAGGACAGAGACAAGGACTATTG
CACTACTAACAACAAGTAGAGTTTTTATTGTGATCATATATGATAAAAGT
AGACTGACTTCTGTTTCAGACCAATTCTTAACACGTATATTTCTTCTCAG
TATAATTACTTCAGGTCTATTAAACAGCTACAACGCCATTCAGATTATAC
AGAAGCTTTGTTATCGTAACGCAGAAAAAACGGAAGCATGTCTACTTTTA
TCATATATAATTATCACAAAAACTCTTGTTTCTAAGTGCACTAGTATTTG
GACGTCACAACTACTGAAGTGTTAGGTGAGGTTGGGACAAGGACACAAAA
ACAATGGCACAACAATACGGAGATAATAACAACTATTTGCACAATCTGTT
CATAGCAGAATGACTTGTAATTGATCAAAGCAATAGTCATCAAAAGCATA
CAGAAAGCTTTATCAACGCAACAAAATATTCCTTATAAAAGTGACATAAA
TAGCTCACCATTCACAACGATAGCTAGCAATACATTGCTGTTCTTGGCTA
CAAATTGTCTACAAACTACAACTGGCCGTCCAAATCATTATGTGTCCTAG
CCCTTTGTATTGTAATAGCAGGCAGCAGTGATTGTAACATACATTTTCTT
TTGTAGATATTTGGATCGTGCATTTAACATTTTTGAGTCAGAGATACATT
TCAATCAGACTATTATGATACATGTAATTTTTTTACCAGTGTAAAAAAGG
GTTACACTATTAAACAACTCATATATACCTCATCCTTTCACATATTTTCT
CATGCAGATCTGGATCGTGCGTTCGACATTGTGGAATCAGAAGTGAAAAC
GTCCTGGAAGATCGTTGCCATGGAGCTAGGTCAGACGGTGGACGAGATTC
TCGTGTTCGAAAAGCAGAGTTTGAAGGTTTGTTTATTTATCTGGTTGTTT
CTTTGTTTGTTTGTTGAGCTGTGAGTTTATTAGGATGCAGACTCTCCACA
TCTACCTGCACAGACACGGACCTGCGGGAAGCAAATGAAGTTGCGCCGAG
CTGGACTGAGATACATTGCGACAAGCTATGATGATGATTTGGATCCACAA
ATTACATTGTGAATTGCAGCTATTACCAATTAACATAATTACATTGTACA
AAACTGCATAACACATAGGAAAAAACATAAACAAAAAGTTAATGTTCAAA
AAAAATCACCTGTGATTAAAAGTCTAGATCTACATTAGGTCCTCTTTGTA
TTAAATAGATAAATGAAATAAATGAAAATGAAACGAATTCTGTGATACTC
ATACAATTTCAAGCTATTCCATGTGTATTCAGATCTCAATTTGTGGATAT
ATTAACTACTTTTCCTAGAGTCCACATATGTACATAAAATGAAATAAAAG
AATACAAACTTAATATACAAACTGAAATGTACAGCAAAATAAACATCTGA
ATTAACACAAAATTTGAATAGGTTCCAGACCAGTGCCGGAGGAGTCTGGA
CTGGTGGAGACTGATGGCGGGACCGAAGGGCGCCACGGTACCCAACCTCG
TACAGGCGCTGCGGAGATGTCGGCTGGACTGGGTCGCTGGTAAGGAGGAT
TCATATTTTACCATTACGAAGAAACGAGGAGAAGTCGAACATGTTGAATC
ATTGTGAGTTTACAATTCATGTAGTAATTTGACAATGTATTTATAGATGT
ATTTATAGCTATTTGCTATTCTTTTGTTGTGACGTGACCTGTACTTAACC
CAGTGGGTATATGTGTACAATAAAGACCTTCATTCATTCATTCATATTAC
GATGGCCCAGTTTACAAACGTGATTTTGAGTCGCCTTAGAGTCGACTCAG
GACTGAGGCCACTCAAGTAGTGTTTTCCTGTTGGAAACCCCATTTGAACA
ACCAAAGCTCCCCACTCACAGCCTCGACTTTAAGTTAAAAGTATTTGACA
TTCTATGCAAATGTAGTGTTTATGATTGAGAGAATATGGAATAGGACCAT
TTGGCCTGCTAAATTTGGGTTCAAACAACCATGTAAAAATCAAGCTTCAA
ATGGGTGGGTACAGATGGGTGCTCCATTAAATTGGGGAGGGGGCGACGAT
GATATCAGTCATAGCCCCAGGGGGTAGTAGGTTACCGTTTCCGATGCAAG
CATACGATTTACGAAGTATGAGGTTAATTATATGAAGGAGATCTAGGAAC
TAAACACACAAGTAGAAGACACGTCGAGGTGATAGTTAAATCACTAGGCC
TTGTCTATAACTGTGTTGTCAACTATAGGTTTGTTCGAGGTCACATTCCT
GTTTGGCCGCCTTCGGGTGACCTGAGGCCCATCCCTATCCGCTTGAACAA
AACAAAGGTCACAATGCGATCACAATGACACGTTTGATCAATCTCCAAGC
AGATGTAGAGGGTTTCGGCTCGGCATCTTAGTAGACATTTAGTATTTTAC
TTCTGCTACAGCAATGAGACGATATGATGATAACGAGACGAGACTTTTTT
CGTAAAGGACCAAATAATGAAAATATGGATGGGGGGGTACAATAAATTCT
CTTTTCGAGTCCAGTTTTAGCAAATTCATTGTTATATTCTCAACAGAGAA
GCAAACTTCCGGTGCAAGTATGTTTCATGCATTTGGAATTTGTCGTTTGA
GGGCCAAATAATGAAAGCCCTGGGTCCCTGATAGAGAAATTAAAATAACA
AATTCCTATTTTGCTGTCCACTGGTTTTGATACTACATCTTTATCTCCCA
ACAGACAAAATAGAGGGCAGATCTCCGATAAGAGTGCTAGAAAAGAAGAC
AATACCGTTTAAACCAGGTAAGTTATATATTATTAACCACATAATTTATG
AAACTGTTCTTAATTAGAATTGCAGTCTATGACCCGAAATATTTCGCATT
TAAATATCTTTAATGTATATTTTCTACTTTGTGTCAATTCTATAGACCCA
TGCTATAAAAGGAAGTTGAATTGTTAGTGGTATGTAACAGTTTTTGGCGA
TGAGTTTGAATTTTTATGAAAAGAAAAGAACTGAGTTGCGTTGATGTATA
TCATAAAGAAAAACCAATACATTGTAACAAGTACTGGCAAGCCATCAAAC
TGTTGAATTCCTATGTGTTTCTTGCACGCAGAGAGAATAGCTCCTGCAAC
AGAAGACAGCCACTCGCGACCAATTCAGCCTGCAGAAGGTTCGTACTCAT
CAATGATTTTTCTAACTATGAATCATAGTATGATCTATGGTATGCTGTTA
GTTCCTTTTTTTTGTAATTAAATGGCTGTGCATTGCAAAATATATTGTAA
ACGTTCTGCTAAAATGTTCTGCTAAAATTTCAACCCAGCGACATTTACTT
AAATGTGTGTTTCATAATTTGTGTACTTGTGAATGTGCATTTATCCACGG
TATGGCTGTAGGGAATGATATCTTTTATCATAATAACATTGCATGATTTA
ACAATAAAATACATTTACTTTGACTCGAGCGATATACGTATTCAAATACA
GTCTCCTTCTTTCCTTCTGAAGCCACTTTAGGTGGTGTACAGTTCCTCAA
AGTTGACAAAGAAGTATCAACACCCGAGCAAAGTCCGGCATCGACACCAG
CACACGAGACCAGTTCTAGCTCCAGTGCAGTTGAGGAGAAATCAGTACAA
GTGGAGAACCATTCTCCTACATTTATCATTGTGAAAAAGAAGACCAAAAC
ACGGAAGGAGAAAAAATCTTCCAAGTCAGAACAAAAGAAGTCGAAAGTTA
CTATTTCTGATCAGGTACAAACAAGACCCAGTGAACAACCCTTACAAGCG
GCTACGCACTACACACAACTGCAACGGTCAGAAAACATCCGTTCAAGCGC
CTTTACTGCACCTACGAAGAAGAAGGCTGCTTCTGACCGAGTATTAACAA
GACCCAAGTCCAGCGAGAAGCCTCCAAAAGTGACCATATCCAACTCACCA
GTGCAACAGTCAGAGTCTATCCATTCAAGCGCCCCCATGCGTAGCCACAC
CAGTACTGCTCCTTCGAAGAAGGTTATTTATGACGAAGCAAAAACAAGAC
GAAGTGAGGAGCCTCCAAAAGTGACTACACACAAAACACAATTACAACGG
TCAGAGACCATCCATTCCAGCGCCCCCACGCGTAGCCACACCGGTACTGC
ACCTCCGAAGCTGCCCGTGCCACCACCAAGAACGAAGCAAATACGACACA
GCCGGTTTCTCGAACACAGGGCAAAACCTCGCGAACGTACGATCGACGGT
ATCAAAAACTACCAGCGGATTCCCACTCACTCCCAAAAGAAACCAGTCCA
AGAAATAACTGACTGGACAAAGGCCCACTCGCAAAAGAAACCAGTCGAAA
GAACAACTGACTGGACTAGGACCCACTCCCAAAAGAAACTAGTCGAAGAA
ATAACTGAGTGGACGAGGGCAACCATCCATCCTCCAGAGAAAAAGAGCGA
ACGAAGGAAAGAGAGACCAAAAAGCCAGAGCTCTATCGTCCGTATAGTAC
CGAGCACACCTCTCAGTTCTCAAGAAGGCGACTTCCTATATTGGGAGAGG
CCATCGAAAGAAAAGGGTCCGGTTATTCCAGTATTACTCCCTAAATTGCA
CAGCATTGAAGAGGACAGTAGCTCTGTACAGCAAAAGATGACACAAGAAG
ACATTCCTGACACACGCAGAAGTCCAATGAGCCCTCAACAGAATGGCGAC
GCGAAAGCTACAACGTCTAGACAAGCAAAAGTAAGGGAGACAACCCCACC
CGTTCCTCCGAGGCGAAAACGAAGTAGGTCGAGCCGTCGGGCGTCTCCGA
TGTATCTCAACAACGAGCAGGAATCCAGCGACGACAGTACCCGAAGTGCC
GGCGAATACACCCGACGTAATTCCTTCAAAAATATCGTCTTAGATCGGGA
GACAGACCGCGTTGACGAAGACCCATTGCCAGTCAGACCGTCCATAGAAA
CCGTGCGACGACAAATGAGAGAGCGACGTCGGACGAGCCAAAAATCTGCG
GTACAAACGGAGAACGACGTCAAGGAGGAAAGAAGAGGAAGAAGAAGAGC
AAGGAGCGTACCAGAAGAAACCCATCGAGTTTCTTCAGAGAGAGCAACGA
TAAGCCAATCCTCTGTTAGATCCGAAAGACCGGCAGAAGTCATTACTGAT
GATGAAGAACACTACGATACACTCCCACAGAGCCGTCGGGAAGGGTCAAT
CGACCGTGACGTCGAAGAGGAGAACCGGCAAAACTTGGACACGGAGGCGG
TACAGGAATCCCACCGGTACGACAACCTTCTGTTGGTCGGCGGTACCCGC
CAACCCCTCCCGCAACAGCGACGAACAGCTACCGAAGCTGACGCATACGA
GAACCAAACGGTCGACAACACACTGAACATCAACCAGGAACAAATGCTGC
AAGATAGATTCACAGAATCACGTCTTTCCGAGAGAAACATCGCCGAAGAA
ACCAGAGAACCCACACCCCCTGTCCAACTTCACTGGGCTGAGATCGTGAA
AGAGGAGTTGATCATATACTATCCGCTAGACGAGTTCGAAACTGACTCGA
ACTATTCTGCGAGTTTTAATGACGAACTTACATGGTCATACGAGGAAGCA
GCATCAGCGTCTCCACCAGAAGAGCCAGTGTTTCATACGGCCGATATTCT
GAGGGAAGAGATGGTGATATACGTACCGGAGGAAGAACTTGAAGCTACAA
ATGAACATTCCGACGAAGTTCAGAGTACAACAAATACACGATATGCATAT
GACGATGACGTCCCTCAATTGAATTCTGGACGAATCTTTGGGGAATATGT
GAATAATCACACCCTATCAGACGAATCTGATGACCACTATACCAGATCAT
ACGTATCTTCTGTAAACGTGAGAAGGGAAACCGAATTGCGTGCAAGCCAG
CGAGCAGATTACGTCAACATGTCTCGTAAAACCTCGCGAGAATCAACAGG
TGACGAGTCACAAAACGGAGGCTCTCGAGCTGGCTTCTTCACACAAGTTC
TCAGAAAGACCAGAGCAAGCAGCAACGACGACGTGTTCGAAGATGGCAGG
TTTAGGCGAGTGAGTTTGCAAAAGAAGACTGCGTCTGTTTCTCGCGATGA
CAGCTTGAGGAAGAAGACGGTCTCGTTTTCTGAAGAGCCCACCGTCATTC
CATCCGATGACAACCAAGAGGATGGAGATGTGGGGAACTATGGTGACGCG
ATGCTGTGGTAA Coding sequence (CDS) from alignment at Sc0000003:3472277..3478938+ >Blg00865.0 ID=Blg00865.0|Name=Blg00865.0|organism=Branchiostoma lanceolatum|type=CDS|length=3093bp|location=Sequence derived from alignment at Sc0000003:3472277..3478938+ (Branchiostoma lanceolatum)
ATGCCGAGTCAAGTAGCCCGAGGGAGGAACCATTCCAACAAGGATGATCT
GGATCGTGCGTTCGACATTGTGGAATCAGAAGTGAAAACGTCCTGGAAGA
TCGTTGCCATGGAGCTAGGTCAGACGGTGGACGAGATTCTCGTGTTCGAA
AAGCAGAGTTTGAAGGTTCCAGACCAGTGCCGGAGGAGTCTGGACTGGTG
GAGACTGATGGCGGGACCGAAGGGCGCCACGGTACCCAACCTCGTACAGG
CGCTGCGGAGATGTCGGCTGGACTGGGTCGCTGACAAAATAGAGGGCAGA
TCTCCGATAAGAGTGCTAGAAAAGAAGACAATACCGTTTAAACCAGAGAG
AATAGCTCCTGCAACAGAAGACAGCCACTCGCGACCAATTCAGCCTGCAG
AAGCCACTTTAGGTGGTGTACAGTTCCTCAAAGTTGACAAAGAAGTATCA
ACACCCGAGCAAAGTCCGGCATCGACACCAGCACACGAGACCAGTTCTAG
CTCCAGTGCAGTTGAGGAGAAATCAGTACAAGTGGAGAACCATTCTCCTA
CATTTATCATTGTGAAAAAGAAGACCAAAACACGGAAGGAGAAAAAATCT
TCCAAGTCAGAACAAAAGAAGTCGAAAGTTACTATTTCTGATCAGGTACA
AACAAGACCCAGTGAACAACCCTTACAAGCGGCTACGCACTACACACAAC
TGCAACGGTCAGAAAACATCCGTTCAAGCGCCTTTACTGCACCTACGAAG
AAGAAGGCTGCTTCTGACCGAGTATTAACAAGACCCAAGTCCAGCGAGAA
GCCTCCAAAAGTGACCATATCCAACTCACCAGTGCAACAGTCAGAGTCTA
TCCATTCAAGCGCCCCCATGCGTAGCCACACCAGTACTGCTCCTTCGAAG
AAGGTTATTTATGACGAAGCAAAAACAAGACGAAGTGAGGAGCCTCCAAA
AGTGACTACACACAAAACACAATTACAACGGTCAGAGACCATCCATTCCA
GCGCCCCCACGCGTAGCCACACCGGTACTGCACCTCCGAAGCTGCCCGTG
CCACCACCAAGAACGAAGCAAATACGACACAGCCGGTTTCTCGAACACAG
GGCAAAACCTCGCGAACGTACGATCGACGGTATCAAAAACTACCAGCGGA
TTCCCACTCACTCCCAAAAGAAACCAGTCCAAGAAATAACTGACTGGACA
AAGGCCCACTCGCAAAAGAAACCAGTCGAAAGAACAACTGACTGGACTAG
GACCCACTCCCAAAAGAAACTAGTCGAAGAAATAACTGAGTGGACGAGGG
CAACCATCCATCCTCCAGAGAAAAAGAGCGAACGAAGGAAAGAGAGACCA
AAAAGCCAGAGCTCTATCGTCCGTATAGTACCGAGCACACCTCTCAGTTC
TCAAGAAGGCGACTTCCTATATTGGGAGAGGCCATCGAAAGAAAAGGGTC
CGGTTATTCCAGTATTACTCCCTAAATTGCACAGCATTGAAGAGGACAGT
AGCTCTGTACAGCAAAAGATGACACAAGAAGACATTCCTGACACACGCAG
AAGTCCAATGAGCCCTCAACAGAATGGCGACGCGAAAGCTACAACGTCTA
GACAAGCAAAAGTAAGGGAGACAACCCCACCCGTTCCTCCGAGGCGAAAA
CGAAGTAGGTCGAGCCGTCGGGCGTCTCCGATGTATCTCAACAACGAGCA
GGAATCCAGCGACGACAGTACCCGAAGTGCCGGCGAATACACCCGACGTA
ATTCCTTCAAAAATATCGTCTTAGATCGGGAGACAGACCGCGTTGACGAA
GACCCATTGCCAGTCAGACCGTCCATAGAAACCGTGCGACGACAAATGAG
AGAGCGACGTCGGACGAGCCAAAAATCTGCGGTACAAACGGAGAACGACG
TCAAGGAGGAAAGAAGAGGAAGAAGAAGAGCAAGGAGCGTACCAGAAGAA
ACCCATCGAGTTTCTTCAGAGAGAGCAACGATAAGCCAATCCTCTGTTAG
ATCCGAAAGACCGGCAGAAGTCATTACTGATGATGAAGAACACTACGATA
CACTCCCACAGAGCCGTCGGGAAGGGTCAATCGACCGTGACGTCGAAGAG
GAGAACCGGCAAAACTTGGACACGGAGGCGGTACAGGAATCCCACCGGTA
CGACAACCTTCTGTTGGTCGGCGGTACCCGCCAACCCCTCCCGCAACAGC
GACGAACAGCTACCGAAGCTGACGCATACGAGAACCAAACGGTCGACAAC
ACACTGAACATCAACCAGGAACAAATGCTGCAAGATAGATTCACAGAATC
ACGTCTTTCCGAGAGAAACATCGCCGAAGAAACCAGAGAACCCACACCCC
CTGTCCAACTTCACTGGGCTGAGATCGTGAAAGAGGAGTTGATCATATAC
TATCCGCTAGACGAGTTCGAAACTGACTCGAACTATTCTGCGAGTTTTAA
TGACGAACTTACATGGTCATACGAGGAAGCAGCATCAGCGTCTCCACCAG
AAGAGCCAGTGTTTCATACGGCCGATATTCTGAGGGAAGAGATGGTGATA
TACGTACCGGAGGAAGAACTTGAAGCTACAAATGAACATTCCGACGAAGT
TCAGAGTACAACAAATACACGATATGCATATGACGATGACGTCCCTCAAT
TGAATTCTGGACGAATCTTTGGGGAATATGTGAATAATCACACCCTATCA
GACGAATCTGATGACCACTATACCAGATCATACGTATCTTCTGTAAACGT
GAGAAGGGAAACCGAATTGCGTGCAAGCCAGCGAGCAGATTACGTCAACA
TGTCTCGTAAAACCTCGCGAGAATCAACAGGTGACGAGTCACAAAACGGA
GGCTCTCGAGCTGGCTTCTTCACACAAGTTCTCAGAAAGACCAGAGCAAG
CAGCAACGACGACGTGTTCGAAGATGGCAGGTTTAGGCGAGTGAGTTTGC
AAAAGAAGACTGCGTCTGTTTCTCGCGATGACAGCTTGAGGAAGAAGACG
GTCTCGTTTTCTGAAGAGCCCACCGTCATTCCATCCGATGACAACCAAGA
GGATGGAGATGTGGGGAACTATGGTGACGCGATGCTGTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00865.0-exon-Sc0000003-1570713199:3472277..3472322 | Blg00865.0-exon-Sc0000003-1570713199:3472277..3472322 | Branchiostoma lanceolatum | exon |
| Blg00865.0-exon-Sc0000003-1570713199:3473534..3473652 | Blg00865.0-exon-Sc0000003-1570713199:3473534..3473652 | Branchiostoma lanceolatum | exon |
| Blg00865.0-exon-Sc0000003-1570713199:3474198..3474315 | Blg00865.0-exon-Sc0000003-1570713199:3474198..3474315 | Branchiostoma lanceolatum | exon |
| Blg00865.0-exon-Sc0000003-1570713199:3475481..3475543 | Blg00865.0-exon-Sc0000003-1570713199:3475481..3475543 | Branchiostoma lanceolatum | exon |
| Blg00865.0-exon-Sc0000003-1570713199:3475858..3475914 | Blg00865.0-exon-Sc0000003-1570713199:3475858..3475914 | Branchiostoma lanceolatum | exon |
| Blg00865.0-exon-Sc0000003-1570713199:3476249..3478938 | Blg00865.0-exon-Sc0000003-1570713199:3476249..3478938 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3472277..3478938 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00865 |
|
