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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7658645..7665357- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00996.4 ID=Blg00996.4|Name=Blg00996.4|organism=Branchiostoma lanceolatum|type=mRNA|length=6713bp|location=Sequence derived from alignment at Sc0000003:7658645..7665357- (Branchiostoma lanceolatum)
ATGTGATTTCAACACACGGGGCATAGTGCAACTCTCAAGGCAAGGAGTCT
TCTACAGTCCTTTAAGGTTCGAGCGACTCCTCGACTGTCTTACTACCACT
TGAGCAGAACGGGGTATTAAAGAGCGGAACGGAGTGTTGCAGAAAGTAGG
GTTATTCCATCTTTGTGAGGAACTTGTGGTTCCTGTTTTGTCGGTGAGGA
CTCGTAAAATGTCACAAGGTAAAAGTTCACCTGAGGTGACAGTGAAGCTC
AGGTGTTCTGCCACCATGTTTTAATTCTTTAAATTGTCACTGTATAACTC
TAGTGGCGTAACATATTTGTATCGATGTCATTGTGGTATACGAATATAAG
AAACGTATATATGGAAACTATTGACATACCTGGGAACAGGAATAATGATT
CAAGCTGGGAGGGCGTAGGTTCAAATTTAGTACACTGGCGATTAGTTGGG
CGGTCTTGTAAAGAGACCTGAATTTCATATATCGTTTGTAACTATATTTC
GATATGTTTATCATGGCTTTAGAAACCGTAGCAACGATCTATAAGCATTT
ATGAATTCGAAACATATCGTACATATCGTCGACACGGAAGCTATAGTTTC
ATATGAAAGTGAAAACTTGTTTAAATGACCATTCACTCTCAGTTTACTTC
CTGGCCGATTTGCATGGGGAGCTTGGTCGCTTGCCAAAAAAGCGGAGCTT
AAATACACACGGCCAGGTCAAATACCCACGGCCAGGTCACCCAAACAATT
TTTGTGCCTAAGGTGTTCACAGAGAATATTCATAGGTCGTCCTTTCGAAA
GCCACTGCAAACTAAGGCACGTGATATCGATGTTGCTGCTTTCGCGGTCT
TTCAAACTTTGAACAGAATCCGGAAGAATAAGTAGATCTTTTCCCAAATC
TAACCATTTTTCACATGAAAATGTATTTGTTACCTTTTTACCCATGTTCA
CGAATTATGAGCTAACACAGGTCCAAGCATTATGAAAACGCTACGAAATT
AGTAGGTCCTGCTGCAATTGCAATAGAACCGAGGTCCATAATCCAAATTT
ATTTTGTTGATACCTACCCACACACCACGCAGGTTTATTCACAATTGCTC
GAGTTTTGCTGTCCATAAATACCCAACTACGAGAAAACGGCACCAAAAGC
ATAACTTTCTTGGCGAAAGTATAAATGTTGATATTGTATCTTTCCAGTTG
AAATGATCGATGAGCCTGTACCGTTCGCGTCCATCCAAGACAATGGGGCT
GGGCATGCGCAGAAGAAGGGCCTGACGGTGATCACAGCCGCCCTGTTCTT
GGTTGGCGAAATGGCGGGAAGCGGTGTGCTGGCGCTGCCGAGAGCTGTCG
TGGATACCGGTACGATATGAATATGTATATGTTGTTAACATGTGACCTGT
GCTTAGCCCAGTGGAGCAAAAATGTACACTAAAGGTCTTCATTGAATAAT
TAATATGTTTTCTGATTAAATGTTCTCTAAACGTATAGATACTGATCCGG
CATATGGCAACATATTGCCAGTGGTGGGCCAAAGATGTGTCCTTGAGGAA
ACCTTTTTTGGGGTGGGGGAAATGGCAGGGAGCGGTGTACTGGCACTGCC
TGAAGCTGTCGTGGACACGGATTTGTCTTCTACTTTCATCCTCCTACGCC
CACGGCCTATGCAATATACCCTGGGAAGACTCTGCTAATGCTAGGGTCAC
ATTTCCTAGCCGGGGCCCGGTCGGGATGTTTGCGAAAACGAAAATATGCA
TATCAAAAAAATACACAATTTCTAGTAAGGAGTAAATTTCTAACGTTTTG
TGTCCTTTGTTGTATCTTATATTATACTTTTCGTTCCCGCAAGCTGCCCG
ACCGGGCCCCGCTTTGGAAATGTGACCTAAGCATAAAGAGGGCTGAGGTT
TCCACTTTTGCGGGCGTGGCCTTTAACCAGCTGTCAGCCAATCAAAAAAC
AACTTTACCTGAAGAAAACATTTAGGAGATGCTCCGATTGGCTGACAGCA
GGTTAGAGATATAACCGCCTTTCATCGTAACAGCGAAATGCGCAACAACC
AAGACCCTTTGTCATCTCCTTTAAGCTGTTGTAACACGCATAAGTTGCAG
GATGTTATCAAAAATCTTCACTGTGATATTGTATATTCTAGGCTGGAACG
GTGTTGTAATGCTGCTACTATGCTGTGCGGTGGCGGGACATAACGGCATC
ATGCTCGGTAGGTGTTGGAACATCCTACAGCTCCGTTGGCCGGAGTACAG
GGACCACGTCAGGGACCCCTACCCGGCCATCGGCGAGAGGGCTTACGGGA
AGATAGGAAAGTAAGTGTCATATTTATTCTATACTGATTATAAAATCATC
ATTAGTGGGCCATACATATAGCCCTCAGGAACCCCCAGAAAGTTCCATTG
GTATATATCTAGAAATGTTTATGGAATCTAGGACAAGCAACAGCACATAT
TATCAAGCGTCAAACAATAACTTAATGTTGGTGGTGGTCCAAAGATATAG
CCTTGAGGAACCCCCACAAGGTTGTGTCAATAGAACGTATGAAAAAGAGG
GCGACTTTCGAAATCAAAATGCACCGTAGGAACTGCTATGTGCTACTTCT
TAGCTCAGATGTTTGGCAATGCATTCTCTAAGTTTTCAAAAGCTATATCT
CGATAAGAAATCGTCTTTTCTTTCTTCCAACAAGGGTTGCAGTGAGTGTT
TGTGTGAACATCACGTTGTTCGGCGTGGCCACGGTGTTCCTGTTGCTGGC
GGCGGAGAACCTACAGACCCTGGTGGAGGACCTGTCTCCTCATCAGAGCA
CCTTCTCCTTCTGTTTCTGGCTCATAATCCTGGCGGGGGCGCTCACACCA
TTCACATGGCTCGGGTCGCCCAAAGATTTCTGGTGAGTGTATTTATAAGA
ACTAGACATACTTTCAATGATGTTGACCTATTGGGCGTCATAGTAGCGAT
GAGTATATTTATAAGAACTAGACATACTTTCAATGATGTTGACCTCTTGG
GCGTCATAGTAACGATGAGTATATTTATAAGAACTAGACATACTTTCAAT
GATGTTGACCTCTTGGGCGTCATAGTAACGATGAGTATATTCATAAGAAC
TAGACATACTTTCAATGATGTTGACCTCTTGGGCGTCATAGTAGCGATGA
GTATATTCATAAGAACTAGACATACTTTCAATGATGCTGACCTCTTGGGC
GTCATAGTAACAATGGATCAAAACGTGGTCTCCAATGAAAACTATGCTTA
AGTTTTTTGTCAGTGGGGAGGGGGGGGTGGTAAATATATAGCGCTAAGGA
ACCAAATATGATAGAAACTAATGTAATTGTAACTGTTTCAAATAACTATT
TCATGTCAGTGTTGGGACAAATATGTCGCCTTGAGGAACCCCATGATAAT
TAAAGGTCGTAACTGTCAAACAATATATTGTGTGCAGTTTCAACTTTCTT
ACATGTTTCATTTTAGGCCGGCGGCTGTTGCAGCCACCGTTGCCACGGTC
TTGGCGTGTCTACTGATGTTTATTGGGGTTCTTGTGGACATCCCAAACTT
TAAAGACGCAAAGGACCAACAAGAGGACATTAAAGTAGATTCAATTACGT
TGTCTGATAGATCATACGAGTTTCGGACTGATATTTTATTGAAAAACCAT
CTAAGGACAAAGGAAAAGTTGGAAGAGCAACAGGCCGTTACACGATTCCA
TTGCATGCTGGGAGACGCAAGGCACTATGGGTACATTAGTGGGCAAACTA
CCTCATTACCATGAATTTGCATGTTAGGCGCATGCGGCCAGTCGGATTCC
GGTCCATGCATCGACACGTGTTGTCATGGTAATAATGTTGTTTGCCCGCT
GGTGTACCCATAGTGCCTTAGGTCTTCCAGCCTTTTATAGTTTCCGTGAG
GTCTATGAGATCATTTATGATTTCTGCAGTATGTCTGGGGGTAACAGATA
GATAAACAATCGTAGAAGTTTCAAACCAAAAACATTTCACGTTTTTTTCC
CAGGCGGTTTTCTTGACGTTTGGAACGATCCTGTTCGCGTTCGGAGGGGC
GTCCACATTTCCCACAATTCAACACGACATGAAGGAGCCAGAAAAGTTTT
CCAGATCCGTCGTCCTGGCGTTTGCCGGTATGCGTGAGAAGGAATTATGC
ATGTTGATGGTTGTGTGAATTTGGGGAAGGGGGATTGTTTCTAAACTATC
TAGACATTCGCACCAAGGCAAGGCTGCGGATCCGTGCCGTAAAGAAGTTA
TTTTGACGACGCATCAGGGTCGAAGCCTGCTACATGATCTTTGTGCCTGG
TGTGCGTGTTTGTGTTGGGTGAGTATGCATCAGTGTGGGGAGGAGGGCAA
AAATAAAACCTTGAGGAACCCCCGCAAGCTAGCGTCAGTAGAATCAAGGT
TTTAACCTCCTTGGTAGAATGTATGAAACATAGGGCAAACAAGCTATGAT
AAGAGGTTGTCACCTAAGAAACTGTTTTGTACGACTGGATCACGTTAGTT
TGCGGTCCAAATGTCAATTGATTGGTTGACTGATTGATTGATTGATTGAT
TAATAATTGGAGGTTTACACACACATGGCAAGGAAATACATGTGTGCTGA
CATACCTGCCCCCCTCCCCCTTCCAGCTCTACTGCTGATGTATCTCCCAG
TGTCCATTGCGGGTTTTCTGGTCTACAAGTCGGAGTGCGAGAGCAACGTG
CTGTCAACCCTGACGGCGGGCGGTCTGAAGTACGCCTCGCTCATCCTCAT
CACCTTACACCTCATCTTCGCCTTCATCATCGTCATCAACCCCGTCTGCC
AGGAGCTCGAGGAACGATTGGGGATAGCCAACAGTAAGTCTACTTGATAA
GCCGGCGCATGGTTTAAGATACGCATGCGAAGAGAGATGCACTGTAGGTA
GTATGTCAAAGGTGAACGCCCCAAACTTGTAAACAGTTCTTGTCTAGACC
ATAATCTATACCATGCCTAGACGTTTTTTCGTTTATGTCTTTTAGGCATT
ACAGTTTGCGTACTGGTATGTTCATGCAACGTGCAAGAATATAGGCTCTA
CGAAGTTTTCCGTGCCTATGACCTTCGTCAGGATAGCTGACCTACCACTC
GTTCACGTGACTTAACAAACATGTGACTTCACGAACGTGACTCTAGGAAC
TTAGTGGGGCAAAGGTCAAGCTCAAAGTCTGTAAATTCCTTGTCTCGTGT
TCTTTTATCTGACTGCCTTATAAACTTCTAATTTCATTAAATCTTTCCGC
CAGAATTTGGAGTATTCCGGATCCTACTCCGGACGTGTCTGGTGGGACTG
GTACTGTTCACCGGAGAGAGTCTGCCTCATTTCGGCGCCATCTTGTCCCT
GGTCGGAGGATCGACCATCACCTGCCTCACTTTCATCTTCCCCTCCATGT
TCTACCTGAAACTCTCCCGACAGACGAGTCCTGATTGGCCAGAAATGTAA
GTTTTTTTATCGACTAAATTCTCAAACTTGCCATATAAAAGGAATAGTTT
TCTTTTTTTTTACCAAGGAAGTTAGTAGTAGATTGATGATGATGATAGAG
TAAGACATCCATACGTACATCACTAAGGGATATTCCATGAAAACGTAGGG
GTTATCAGGGTAATTGCTCTTTGAATTGGGAGGGATACGAGATACGATAA
TGATGCTGAACAGGGCTACGACCATGAAACAAGTCTTGATCGCCCATTAA
AGATTTCTGATGAAATAGCGCCATGTACAACAACAACAACATTTTAAACA
TGCATGTCTGACTTTTTGTCCCCCTTGCGTTTTTACAGCGAAGTGCAGCC
ATACGAGTGGGCGTGGCATATAGAGTTCATCCTGATTGGTGTGGTTGGCG
GCATAGCCTCCACCTACTCCGCTATTGACGGGATCGCCAGCGGCTTCCAG
GTGGTTCCCTGTTACGTCAACATGACAGCTGCTAATATGTAAAACTTGTA
ATTGTTGCCTTAAACATATACGTAGAGCCGTATGCTTGTCCAAAATGGCC
TCCTTTCCTTGCCTAAAAAAAGCAAATGGCTTTCTTAGTCTATACAAGGA
GGTTAAAGAGATTGGAGGTTGATCTTTAATCATGCCATTGGAGGGCGGCC
AAGAATCTGATTCCATGCAGCCAGGATGCATTGACGTACTGACAAGGCTG
CGCTCCTAAGGCGTCGCCAAAAATTATGCGAAATCTACAGACGTTTTGTG
TAAGATTATCCTTCAAAGCGGTTTCTGTGGCCGCAAGTGAGACTAATTAC
ATAGAAATGCGAACTGTGCAATGTTTAGAATCTCACTTTTTTGTGTGCAG
ATATAAGATATAATTCTGTCAAACTGTTACGGTCATAGCCATATCATGAC
TTTGTATTATATATGCAAAAATATAAGGCTCGATATGTCATATTTCGTAC
ATCTTGATATTGTACACAATATAATGTACCTTTCCTGATGCCGTCCTTAA
AGAAATAGTGGTCTATATTGTATGAACATTTGGTAGTAGCTGCAGCTGTA
TGTACTTACGTCAAGAAAACAGTTGTGCCACTTCCCTATCACCAGTGCAT
TCATGGATCAGAGTTAAACTGTGATTTCCAACACAAAAGATCCTACTGTA
AACAAACGCTTTTAAAATTTGTCATGATGTAACGTTTTTAGTGTTGCAGA
TTTTAATGCAAAATATAGGCAGGATTTTTGTACCTTTGGTTCTTTGTGCA
ATGTGAATAAAAT Coding sequence (CDS) from alignment at Sc0000003:7658645..7665357- >Blg00996.4 ID=Blg00996.4|Name=Blg00996.4|organism=Branchiostoma lanceolatum|type=CDS|length=1320bp|location=Sequence derived from alignment at Sc0000003:7658645..7665357- (Branchiostoma lanceolatum)
ATGATCGATGAGCCTGTACCGTTCGCGTCCATCCAAGACAATGGGGCTGG
GCATGCGCAGAAGAAGGGCCTGACGGTGATCACAGCCGCCCTGTTCTTGG
TTGGCGAAATGGCGGGAAGCGGTGTGCTGGCGCTGCCGAGAGCTGTCGTG
GATACCGGCTGGAACGGTGTTGTAATGCTGCTACTATGCTGTGCGGTGGC
GGGACATAACGGCATCATGCTCGGTAGGTGTTGGAACATCCTACAGCTCC
GTTGGCCGGAGTACAGGGACCACGTCAGGGACCCCTACCCGGCCATCGGC
GAGAGGGCTTACGGGAAGATAGGAAAGGTTGCAGTGAGTGTTTGTGTGAA
CATCACGTTGTTCGGCGTGGCCACGGTGTTCCTGTTGCTGGCGGCGGAGA
ACCTACAGACCCTGGTGGAGGACCTGTCTCCTCATCAGAGCACCTTCTCC
TTCTGTTTCTGGCTCATAATCCTGGCGGGGGCGCTCACACCATTCACATG
GCTCGGGTCGCCCAAAGATTTCTGGCCGGCGGCTGTTGCAGCCACCGTTG
CCACGGTCTTGGCGTGTCTACTGATGTTTATTGGGGTTCTTGTGGACATC
CCAAACTTTAAAGACGCAAAGGACCAACAAGAGGACATTAAAGCGGTTTT
CTTGACGTTTGGAACGATCCTGTTCGCGTTCGGAGGGGCGTCCACATTTC
CCACAATTCAACACGACATGAAGGAGCCAGAAAAGTTTTCCAGATCCGTC
GTCCTGGCGTTTGCCGCTCTACTGCTGATGTATCTCCCAGTGTCCATTGC
GGGTTTTCTGGTCTACAAGTCGGAGTGCGAGAGCAACGTGCTGTCAACCC
TGACGGCGGGCGGTCTGAAGTACGCCTCGCTCATCCTCATCACCTTACAC
CTCATCTTCGCCTTCATCATCGTCATCAACCCCGTCTGCCAGGAGCTCGA
GGAACGATTGGGGATAGCCAACAAATTTGGAGTATTCCGGATCCTACTCC
GGACGTGTCTGGTGGGACTGGTACTGTTCACCGGAGAGAGTCTGCCTCAT
TTCGGCGCCATCTTGTCCCTGGTCGGAGGATCGACCATCACCTGCCTCAC
TTTCATCTTCCCCTCCATGTTCTACCTGAAACTCTCCCGACAGACGAGTC
CTGATTGGCCAGAAATCGAAGTGCAGCCATACGAGTGGGCGTGGCATATA
GAGTTCATCCTGATTGGTGTGGTTGGCGGCATAGCCTCCACCTACTCCGC
TATTGACGGGATCGCCAGCGGCTTCCAGGTGGTTCCCTGTTACGTCAACA
TGACAGCTGCTAATATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00996.4-exon-Sc0000003-1570713199:7665165..7665357 | Blg00996.4-exon-Sc0000003-1570713199:7665165..7665357 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7663999..7664160 | Blg00996.4-exon-Sc0000003-1570713199:7663999..7664160 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7663048..7663216 | Blg00996.4-exon-Sc0000003-1570713199:7663048..7663216 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7662476..7662673 | Blg00996.4-exon-Sc0000003-1570713199:7662476..7662673 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7661774..7661891 | Blg00996.4-exon-Sc0000003-1570713199:7661774..7661891 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7661231..7661354 | Blg00996.4-exon-Sc0000003-1570713199:7661231..7661354 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7660525..7660731 | Blg00996.4-exon-Sc0000003-1570713199:7660525..7660731 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7659912..7660104 | Blg00996.4-exon-Sc0000003-1570713199:7659912..7660104 | Branchiostoma lanceolatum | exon |
| Blg00996.4-exon-Sc0000003-1570713199:7658645..7659569 | Blg00996.4-exon-Sc0000003-1570713199:7658645..7659569 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7658645..7665357 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00996 |
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