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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:1196747..1201909+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01038.1 ID=Blg01038.1|Name=Blg01038.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5163bp|location=Sequence derived from alignment at Sc0000003:1196747..1201909+ (Branchiostoma lanceolatum)
TCAGTACTGGAGTCAGCACGTGGCTGTCAAACGTCTGCTGACTCGTCAAC
TCACAGGAAGGTTCTGTTTTATCTTATGTGTTATAGAATTTCTTGGTTTG
TTTTAGTTGTTCCCCACTCTTCTTAATTTTGTGCTACTATCAACATAAAT
GTACCAAGTTGCAGTGACCTGTTAAAAGAGGAAATCATTGAACAGTCCTA
TCAAATCCGAGTGCCCGGTGATAGAAAAAGGCAATAGAGTAATAGGTACG
AAAAAACTAATAAAACGTGATAGCCAGGTAGCTTGTGGGCTTTGTTAAAC
ATGGCACATAACATGTCCTTACAAATTCTGCGCCCTGCAAGTGAGCAAGA
TCTGCTGTACTCCGAAGCGAGGAAACTGAACCTGGGAAGCCGATCAGACC
ACGTCATCAGTCTGCTGGGGGTCTGTCTGGATCCAAACTTCGCCATCGTC
ATGCCCTACATGGAGAACGGCTCCCTGGCCGAGCTGCTAAAGGATGTGGA
CGTGCCCTGGGCCCTGAGGTGGAGAATGGCGCATGAGATCTCCCTGGGGA
TGACTTTCCTGCACTGCCAGAACCCACAGATTCTCCACTGTGATCTGAAG
GCAGAGAACGTGCTACTGGATGGGGACTTCCATGTGAAGGTGTATATTCT
ATCGCTCATTGCTTTTGTTAAATGAAGCACTTACCAGTTACCATAACAAA
AATATTTTCATTTGTTCAATTCTACAGCTTCAGAAGAACGCAAATTTGAA
CGGTCCAAGTTAAGTAAGTTTCAAATTAAGTCGTCTTTTGATAACGATAA
AGTAAGTCTCAGATACCCTTTCTCCAGATTTCGGACTTCGGCCTGTCCAA
GTGGAGGACCAAATCTCGTGTTGTCACTGCAACGAGTCCTGTAGGCGGCA
CAATTACACATGCGCCGCCGGAGTTCTTTCTTGACATCAACGTCGTTCCA
AACTCCGAGTTTGATGTCTACAGGTACTAACAATTTTTTGTTATAACATG
GAGTTTATAAGAAAATCACGTAACAAACATTATACACGGACCATTACAGG
GCCCAAGTGCCATTGTATTTACCTAATTACATCTCTTTGTCCGAAAGTGA
CCATTTTAACTCTTCAGAGTTCAAGCAAAGATTTGTTATGGTTTCAGCTT
TGGTGTGCTGCTGTGGGAGATTATCACGAGAACAGATCCATATGGAAGTG
AGTTCATGATCTTTGTGTTTAGGTTTATTGGGTTTCTCTTAAAACGTAAA
GATATACTAAAAGTAATCATCAAACTCTCGCATAATCAATGGCAATCACT
TTGATGCCATATGGAACGTCTTACAGCCCTTAACCAATTACGGTGACCTT
ATCTTCGACACAAGTGCCAATGTGACAAATATCTAAATCAAAACACGTTA
CTTGCGCTTGGTGGAATCACCGATACGTTCATTTATAACCATCCCTTCTG
CAGATGCTGCGGCCAACTCTGCCCTCATCACGCAAGCCGTGACGTCAGGA
CAGCGACCTGACCTGACCCTGATCCCCACAGACCGGGCGGACGTGACGTC
ATTGAGCGAACTGATGCAGACATGCTGGAGTCAGAAACCGGAGAACAGGC
CAACATTCCAAGGTAAAAAAAAACACTGTATTTTTACTTTATAATCTGCT
GAATCTACTTACATTCCCTATCTGGTTACCTGTTGTATGTCATCGTAGGG
GAATGAAGAAAAAGGGCAGAGGAAGGTTAGAAACTGCATGGTTGATGTCA
ATTACATCCACATCAATTTGTCAATGAATAGTCGTTGCCTCAGTGGAGTT
ATGAAAGGATATTATCTACTGCTACAACTTCCCATACGAAGACCTCCTAA
CCACAGTAAAGACAACTGAAGTGCATGGTACAGTCTCTTTTCACGGTCAT
CGGGATAAGCCAAAACGACCACGTTATGTACAAGGAACTGTCCAGGGAGG
AAGGAAGAGGGTAGGCAACGGAAAGGATAGGAGGATAATACCAGAGAATA
GACAGGCATGACCCTAGAAAAACACAAAGAAACCCGATATGGGTAGAGAA
AATGGTTGTCAGATATTCTCCTGTGCCCCAACGGCCAAACGTTAGATTAA
GGGACGGGTGAGATATCTAATGCTGAAAGATGCATTTGAATAAGCTGATG
GCAAACATGTAGTACCGTTGATGTCCAGGGTGTGAAGACCATATCCATAG
GATATAAACTAATGCTATCTACAGTAGTGTGAAAAGATGCAGTTCACTAA
ATTGTTGGTTAACTGTTTATAACAACAGAGTGTGAAGACCGCCTCCGTGC
CGTAACCAGCAGGTCCAGTAAGGAGGCCGTTCTACAGGCCATTATCGACG
TGCAGAGAATGAAGGTAATATCATGGAACTTTCACCTGTCTTTGTCCTGT
CCTTTCATCTGGAAGCAAAGACAGTGAAAAATAGCCTGGTATCTACTATA
TTTTAGCTCCAGTTTGCTACTCTGGTCACCTCTCCTTGCTGATCCCTAGG
TTCCTATTTAATATGACTGACCGTCTTCATTGATGACACTGTGGCGATGA
CTGTTGATGCTTTATACTCTCATCTGGCAGTAACGATAGTGGGAAGTAAC
CTGGTATCCACCCTATTCTAGCTCCGGTTTGCTACTCTGACCGTTTCTCT
GCTGAATAGTCGGCAAGGTAAATAATCGGAAGAGCAAACCAGAGCTAGAA
TAGGCTGAGTGGAGGGTAGAAAATTTGCAAAACTTTTCATGTTTACCAGT
AACAGGTGATTGTTGATCCTTGGTTTCTTAGCTACCCTGACTTGACGACT
GCAGCTTAGAGGCTCTATTCTGGCGGTACCAGCCAGCCGAGGGTCTATAA
AGTCGATTCTCTTATATATTACTCTTACGAATGCGTGGTAGTCTAGGTCA
CATGTGAGCCTATGCTTATTCTCCTAACCCCACATCCTGAACACTCGGCA
ATCGGAGAACAAAACTGCAGCAAGAATATGGTTATATCAAGGAGGTTTTC
TCCTTGGTTATATAGAAAGTACCAATGGGGAAAATGTATATTATAAACTA
TTTCTGTGCCTCAATATCCCAGTATGTCATTAGGTAAACCCTCTATTATA
AAACACACCTGTACGTATATTTACAATATTACCAAGAAGCGAGAAGAGGC
CAAATTAACGTAACCATTAGATTAGAGTTAGCTTATCATTGTAATGTATA
TATATATATACGTACTTTCAAACTGTTATGTTTTCTGTTGTGACCTGTAC
TAAACCCAGTGGGTATGTGTGTACAATAAATGTCTTCATTCATTCATTCA
TTCATTCATTCATTCATTCATTACCTTAAAACACTAGTTTCACAGTGATG
ATGAGATTCTTGTTGCACTTGTCCACAGGCTCGCAAGAACTGATTCAACT
CATTGACAGCCTCGATCGGCTACGAGACGACTACCAGCACCTGAGTTGTC
GTGTTTTTGTGGAGATTAGACAAAAATCTATATAGAGTCATACTGAAGAC
TGTTAAAGGATGCAAATACATGCACATAGAGTAGCTCAGAGGACGTTTTT
AACTAATCTAGCTATAAATCCAGGGGACCAAAGAACAATATTGGTACAAA
CTATGAGCGTGCTTGTTATCAAGCTACAACATTTTCATCAACTAATCAGG
ACTGATTTAAGTCTTTGTTTCTATGTACAATAGGCAACAAGTAGGGGAAA
TTTACAAGAGGTTGCTACGAAATGCAAGTGCATGCACATAGAGTAGTTCA
TCGGACCCAGGAACTTTCCTGATAATCTAGATCCAGGGGGTCAAAAGGCA
GTATTGGTACAAACTATTTGCGTACTCTTTCAAGCTACATTTTTCTATCA
ACAAATTAGGATGGATTCCACTGATTGACATCTTCGAATACGAAACGAGT
ACCAACATCAGATTTGTATCATTTTCGTATAGGCCAGGTAACAAGTAGGA
GAACTTTACAAGAGGTTGTTAAGAAATGCGAATACAGGTACATACATGTA
GAGTAGTTCAGCGGACACAGGAACTTTCCTGATAATCTAGATCCAGGGGG
CCAAAAGGCAATATTGGTACAAACTATTCCCGTGCCATTTTCAAGCTACA
AGCAACAATATTGTCATCTACAAATTAGGACTGATTTAAGTCATTGGCAT
ATTTGGACACGAGACGAGTATCAGATTTGTCTCTTTCGTGAAGAACAGGT
AACAAATAGGATGAATTTACAAGAGGTTGTTAAGAAATGCGAATACAGCC
ACAAACCGCGCGTAATTCATCGGACATAGGACATTTTTAATTTCATATAG
ATCCAGGATACGCCAAAGCCAACACTGGTACAAGTAGGAGAAATTTACAA
GAGGTTGTTAAGAAATGTGAATACAGCCACAAACCGCGCGTAATTCATCG
GACATAGGATATTTCTAATTTCATATAGATCCAGGATACGCCAAAGCCAA
CACTGGTACAAGTAGGAGAAATTTACAAGAGGTTGTTAAGAAATGCGAAT
ATAGCCACAAGGCGCAATTCATCGGACATAGGATATTTTTAATTTCATAT
AGATCCAGGATACGCCAATGCCAACACTGGTACAAAACTCTTTGAGTGTT
TTTGATTTAACAATGTTTTTAGCAATCTATTTTCTGTTATTCAACATCGG
ACCATCATAGTTCTGGCTCAGGAATTCTTGCCACCAGGTAAACTAATCTA
TAAGTTGAACGTAGTGCTTCCGTAGTACTTGAACATGTAATGGTTTTGTT
GAGTGAAAATGATTAATGTAACACATTTTACAGGCTTCTTTACAATCTTT
GTTTTTGAGGGCTGGTGTGGTAATAAAATTGGTTGAAAATGGTATATGGT
GAATTTATGTGTTTTTATTTTCTGGACCTACGATTGGCCAAAAGGCAATA
CAAGTACGGTAATACAAATTCTTTGAGTGCTTTTATCTAGCTATAATCAT
CCAGCAACAATTTTTGAGCAACAAATTTTGTGCATCAGATGCCATCATTA
ATACATTAAAATAACAATAAAACTTTACATTAGTGCATTATGTAGCTTAT
ATGCTTCAAAAGCTACGTTTTCAAGGTAGGCATTTACGTGAAATGCAGAC
CAAGTGAAACTAATCAGTCATAATTCAATTATGAATTGATAAATAAACGT
ATGATACATAAAC Coding sequence (CDS) from alignment at Sc0000003:1196747..1201909+ >Blg01038.1 ID=Blg01038.1|Name=Blg01038.1|organism=Branchiostoma lanceolatum|type=CDS|length=795bp|location=Sequence derived from alignment at Sc0000003:1196747..1201909+ (Branchiostoma lanceolatum)
ATGGCACATAACATGTCCTTACAAATTCTGCGCCCTGCAAGTGAGCAAGA
TCTGCTGTACTCCGAAGCGAGGAAACTGAACCTGGGAAGCCGATCAGACC
ACGTCATCAGTCTGCTGGGGGTCTGTCTGGATCCAAACTTCGCCATCGTC
ATGCCCTACATGGAGAACGGCTCCCTGGCCGAGCTGCTAAAGGATGTGGA
CGTGCCCTGGGCCCTGAGGTGGAGAATGGCGCATGAGATCTCCCTGGGGA
TGACTTTCCTGCACTGCCAGAACCCACAGATTCTCCACTGTGATCTGAAG
GCAGAGAACGTGCTACTGGATGGGGACTTCCATGTGAAGATTTCGGACTT
CGGCCTGTCCAAGTGGAGGACCAAATCTCGTGTTGTCACTGCAACGAGTC
CTGTAGGCGGCACAATTACACATGCGCCGCCGGAGTTCTTTCTTGACATC
AACGTCGTTCCAAACTCCGAGTTTGATGTCTACAGCTTTGGTGTGCTGCT
GTGGGAGATTATCACGAGAACAGATCCATATGGAAATGCTGCGGCCAACT
CTGCCCTCATCACGCAAGCCGTGACGTCAGGACAGCGACCTGACCTGACC
CTGATCCCCACAGACCGGGCGGACGTGACGTCATTGAGCGAACTGATGCA
GACATGCTGGAGTCAGAAACCGGAGAACAGGCCAACATTCCAAGAGTGTG
AAGACCGCCTCCGTGCCGTAACCAGCAGGTCCAGTAAGGAGGCCGTTCTA
CAGGCCATTATCGACGTGCAGAGAATGAAGGCTCGCAAGAACTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01038.1-exon-Sc0000003-1570713199:1196747..1197385 | Blg01038.1-exon-Sc0000003-1570713199:1196747..1197385 | Branchiostoma lanceolatum | exon |
| Blg01038.1-exon-Sc0000003-1570713199:1197574..1197719 | Blg01038.1-exon-Sc0000003-1570713199:1197574..1197719 | Branchiostoma lanceolatum | exon |
| Blg01038.1-exon-Sc0000003-1570713199:1197894..1197943 | Blg01038.1-exon-Sc0000003-1570713199:1197894..1197943 | Branchiostoma lanceolatum | exon |
| Blg01038.1-exon-Sc0000003-1570713199:1198200..1198358 | Blg01038.1-exon-Sc0000003-1570713199:1198200..1198358 | Branchiostoma lanceolatum | exon |
| Blg01038.1-exon-Sc0000003-1570713199:1199025..1199110 | Blg01038.1-exon-Sc0000003-1570713199:1199025..1199110 | Branchiostoma lanceolatum | exon |
| Blg01038.1-exon-Sc0000003-1570713199:1200125..1200733 | Blg01038.1-exon-Sc0000003-1570713199:1200125..1200733 | Branchiostoma lanceolatum | exon |
| Blg01038.1-exon-Sc0000003-1570713199:1200995..1201021 | Blg01038.1-exon-Sc0000003-1570713199:1200995..1201021 | Branchiostoma lanceolatum | exon |
| Blg01038.1-exon-Sc0000003-1570713199:1201274..1201909 | Blg01038.1-exon-Sc0000003-1570713199:1201274..1201909 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:1196747..1201909 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01038 |
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