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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000294:94924..101408+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02114.0 ID=Blg02114.0|Name=Blg02114.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6485bp|location=Sequence derived from alignment at Sc0000294:94924..101408+ (Branchiostoma lanceolatum) CATAAACATCTGTTATGTTCACAACACTATTTTACTACTTCCAACAGTGA
CAAGTGGGAGGGGCATTCTCCAAACCATACCTCATAGCATAGCCAGACTA
AGCTGTAGTGAACGGGACGTCACAGGCCTCCTTAGCTACATGCACGTCAA
CACAGTACTCACAAATGAATAACCAGTGTACGCCTTGCAACATATACCAC
TGTACAAGATGAAACTATATCTCCAGAAGTTTTTTAAAAGACATCCTCAC
TCACTCAGTCAGTCAGTGAAACTGTAAAACTCCTGAACTTGTGAAGTTGT
TTAGGCCTCCTTGAGGAAAGTTATCCGTGACCATACCTATTTCACGAAGA
GAGGGCAACACCTCTTACCTTATAAACCGGAATTTTATGGGGTAAGCGTG
GCCAGCAACTGGGGTTTATGGTCTTCAATGATCGTCAACTGAGTTTATTT
TCCTGTCTGGTGCCGCCGCCATCTTGGATAGAAATCAAATTGTAACCATG
GCAACCGACTCATTACGCATGCCTGATTATTCCATCCCAGCATCCTTTGC
GTTCGCCGTTCGCGTCCTCCATCTTTTGCCACTAAGAGAAATTTCAACTT
CTTTTATGCAGCAAAATATTTGCCAAGTTCGACGGCCAGTGACAGTATTT
GTGGAGTGACATCGGCATGTCACACTACAGGGACCACGGTCCGCTCAACT
GCAAGATCTACGTCGGGAACCTGCCCCCGGGAGCCGCCAAACACGAGATA
GAGGAGCGGTTCAGGTGAGTTGTGCGCCCAGCTGGTCGGTAGACAATACC
CGTTGGGGAACATGTGTTTTTTTTGTCGACCTTAAGTGAACCTTAACACT
TTTTTGTGGTGACGTTGAGCATGTCTGTTGTGTTAAACTGACAACCCTGT
AAGAGTTTTGAAAGGAACCTGCCACAGCCTGACAATGCCAGTGAAGGACA
GCTAGCTTACGTGGCAGTCCCCCTGAACCCCTCACGGTATCCCGGATATG
GAGGGGGTTTCATAGTCTCTACTAGATAGACTCCAGAGCCCTGATGTTGT
TGGAAAACCTCCTTGGTTCATGTAACTCTGGTCGGCTAACTCCTCTGGCA
TATCATTCAGCCTATTTGCCCAGTTTCTAGTCCCTGTAACTCGGGTTGGC
TAATTATAACTCCTCTGGCGTCAGTCCATTTGCCCTACTATTTCCAAATA
TTTCCAGCAACCTGGAGAACATTACCTGGTGCAACCCCAGGGGGTTGAAC
GGACGTAAATAAGTAGTATTTGTATTTTCCAGGGATTCTACAGTCCAAAA
GAGGGCTCATCAGATTGACATACCATATAGAGATTTGAACTTTAATATTG
AAGACTCTACTTTGCTCTAAATATATAGCACAGTGGTCTATAAAAGCTTA
GCCTGGATTCTAGACTATCACACAATAGATATTTTAGAGATTGGGCCATT
GGGGGTCTGGCATCCAGGCTAGTAGTTAAAGCTATATTAAAAGTAGCACA
TTTGTTAGCCTTGATGCCAGACCAGCACACGACACACTAATCCCTTTGGT
CAGGGAAGCCCACACGACCCCTACCAGAGTTGGTACACTTGTCCATCGAA
TGTTTAGATTTGAATCGAAGGACTGGCATGTATTGGATTTGATAAAACAA
AGGGTCATAAAGTAAATGCAGTTGTCCTTAAATTTTTGATGGGACCTTTC
ATAAAAACCCAGTCAGTCACTGACTATATCTATATAGCCAACAAGTAATT
CATACTTCATACAAGGACAAATTTTCATTCTGCATTCAGTCAACACCTTC
ATGCACAGTGAAATTTTTATGCTGCTTGACAAAATAGAGTCAATGTTAAA
GCTTGAGACTCTGGTTTGCTTATTGAATTAATTAAGAGTCCTATGGATGT
GTAGGTAAGTTTGGATGGTGAGGAGACAAAGACTGCTTCTCAGTAGGCAC
GCTTGCCCCCAGGCTGATCATGGTCACATTTTTGTCTGTGGAGCACATAT
CTCAACCAGTTTGTCAGGCTGCAGGGTAACTACAGAAACTGATGAATGAT
AGTTTGATGAATGTNCAGGCTAACTACAGAAACTGATGAATGATAGTTTG
ATGAATGTCTTTATTGTACTGTAAATGCGGTTGGCGGTGGTCTAATGCTC
ATGGTTTTTGCTGTAACCTGCAAACTTAAAACCACTATGAAAATGCTGCC
TACCTACTACCTCGTTTCAACCACGAACTAAAAACCACCGCAAACGCTCC
ATTTTCTGTCTACCACGAAATCAAATCACTGCATTTACAGTAATTGCACA
GGGAATGGATTGCCTCGCAGCATCTAGATCTCAACCAGTGTAGCCTGGAG
AAATGTGTACTGGTTAAAATGTCAGTACAGACCTGGGTAGACTGAAGAGC
TTTGTTCTCAGTAGCTTGTCCACATTCTTTCTGACAATTTGTCAGGTCTG
TTTGGACATGTCAGAGTTGAAGATAGAGAGCCCCTTATCTTTGTATAAAC
AGAACAGGTAGCATGAGGGCAATTTACAATAGCATTTTGCAATTGTTTCG
CTGGGTGGAAAGAAATACTTTTAAGTTTTGCAGATGTAGTAACATGTACC
AATAAAATGATTTTTTTTGATGATTTTAAAAAAGGACTATCTGAAACCTT
TCAACTGAGGCCATACAAGGAGACCAGGTTATTGTTTAAACAACACCTGT
TTGTTGTGAGTGGTTGTATCGAACATCAGCTTTAGCCATACAGGGTTGTG
CTTTGCAACTTTTAAATCCTACCATTTTGGGTCATTGACCCCTATGTGCT
ACTGAGTCTTAATAATAGATCTCTTAGGAGAGAAGTCTCAAATTGCTGCG
CCGCCCTGTAATTACTGTATTTTGACTTTGTTCCAAAGATTTTCTCTTCA
ACATTTAATTACCATCCAAACCAGACAGCCTTTTATGAAGTGGTTTGGTT
GGTGTGCAAATTTCTGGAGTCCCCGCCTATATACTGAGAGTTCAACTTTC
TCATGTAGTACTTAAGATTTTCTTAAAATGTACACTTAGCACATCCTCCG
GCTATAGCTATTTTATTAGATCCATCCATGGGCTAGTTACATGTGTGCAA
GTTGCAACAAAACATTTTTTTGTGTCCCAGTCAACTGTAAACCTGTACAG
TCAAGCATAGCTTGTTCCCACACTCAGTAGTGTGGTGTTCTGGCACACTG
CCATGGGTGACACCAGATCCAGTTGTGTTCTTGATTTACTTCTGTAAGCA
GATATGTTGACAAGTCTGGCTGTGCATCTCATACAAGGTCGGTCTCTTTG
CCATGTCACTGCCAGTCAACACATCCAAATTTACTAACTAACCATGTTAC
ATTCTGTTGCTTAACTACATGCTCTGGGTTACATGGGATACTATACATAT
TCAGAATGCAAAGTGTACCAGTACATTTGTTACAGCTAAGATTTATTGAT
ACATTTCTTACATTCCTTTTTTTCTGTGCAGTGATTTTGGACGCCTGCGG
AACGTATGGGTGGCGAGGAACCCTCCAGGCTTTGCGTATGTGGAGTTTGA
AGACCACCGAGATGCCAGGGATGCAGTGAAAAGTCTGAGTGGGAAGCTGA
TCTGTGGGGTGCGGGCCAGGGTGGAGTTCTCACACGGGATGAGGCGACCG
TCCCGCAGGGGACTGCCACCTCCCGCGCCATCTCGATCACACGACCGCCA
CAACTCCTCACGGTCCAGACGATCCAGGTATGTTATCTCAGGACTCAGGA
CACCTGCTAGCTGTATGGAATAGATGCAGTTATCATTGCAGCTCACTTCA
AGGTAGTGTCTCACTAGTGGCACCACTTGGACCAAGGCCAACAAATCCCT
TGTGAGTTGATAGAAGTGCACTAACAAACGTAGCACTTGGGGATGGCACT
AAGATCTTATTTTGTAAACTATAGGACTGTGATAGTACTACTAAGTGTTA
TAATGTGTCCAATCATATTCCAGATCCCGTTCTCCAAGACGACAGAGGTA
CAGGTCAAGATCGCGGAGCAGGAGTAGAAGTCCGCGGCGCAGTCGCAGCT
ACAGCAGAGACCGCTCCAGGTCAAGAGACCGCAGGTCCANCACTGCTGAA
CAAAATATTGTGTAGTGTGTGTGCATGTGTGTGTATGTGTAATATCTATC
TAGCTGCAAAGCATGCAATGTTTGATATAGGCATATGACACATATGATGT
AGTGACCCAGCAGATAGCTCTTGGATGGCAATGATATAATCTTGCTGTCA
TTATATAGAACCAAGTTTCTACATTTAATTTAATGTCTTGGATGTGTCTC
CTCCGTTTTCAGAGGAAGCTGTTATACATGTACTTATTAATCAGCATATG
ATGGTGGGTTTAAGAGTTTCCAACTTTTTACAACTTTTCATAAGGGAACC
TGGTGGTGTCTATGTGGCTTAGTCTGGTATTCTGCACTGCCTCTGCTGGC
GCTCGCTTCAATGCCTTGCATTTTTATCAAACGATCAAAATGAAGCGAGG
AAAGAAGAAATTAATTTTTGTCTTTTTGTTTTCACAATTAGAAATGTAAG
TAAAAAAGGTTTGGTGCATAACCTTGAAATGTCTCATGAATAATGCAGCT
TGATGTCCATACTGTGGTTTGGTTTAGTCATGTACATTGGCTGTTGTATG
AAACCATTTCCACCTGTGAAAATCAGTAGGCACGTCTGTGTGAGCAGGTA
CTGAATGTTGAACCTTACCTGTAGCTCCAGTACTGACTGTTGTTGTTCGT
CTGGACGCCCCAAGACTGTCCTTTGTTGTGTACTATGATGATGATCATGC
TGTAACATTCCGTTAACAGGAGGCATGTTCCCCTGCCCCCCAAATCAACC
GAACAGCCGTCCAACAAATGGGCAACCAATCAACCCAACTGCCCTGCCAA
TCAACCACCCAGACGACATCTGAGGCCCAACCCCCACAACCAATTCTCTC
AACCATCCAACCCCACTTCTCCCAACTAGACCAGCGGACAACGGGGGTGC
CTTGTGCCACGCACCTCGCACCCTGTCCCACCTAGCATCACTATCTGCAT
AGTGAACAGGCAACGCAGATAAGTCAGCATCCCTCCCGCCGCACGGGAGA
CAGGCAGGCCTCGCTCTAGCAGGTCATAGGTCGTAAAGCCCTTCAAAAGG
CAGGTAGATCCATACAGAAATTACAGTAAAAAGATCTGTTTTTTTTTCCG
TTGCNGCAAACTAGTGTTTTTTTCTTTCCAGTCTTTTCTCCTCCTCTTGA
TAAAATGCTTTTTGCTTTCATTTTGCACATTTGTCAGTGTTTCCTGTCCT
GTGGTGTTGTGTGTACTGACCGTTTTCTCCACAGCAACCCTGATGCAGGA
GTTCCTACAGAGACAGGCAGACAACATGACACATCACAGGCTGTGAAGGA
TGGGGCTTTAGCTGTAGTTCCTATCTGTGGTAGTTGATAAACTACTCTGA
AAATGCTCGAGTCACAAAGTCATGACATACATAGTGAATCTTTCAGAATG
CAGGACTATGAACAATTTCTGCAACAACGTTGGACAGTTAAGTGCTGTGA
CAGAACAGCTGCTGTAATTGGAGATGAACAGCTCCTTGTTGTACCCAGAA
CTCCACTAAACTTTTATTCCATGGCAGCTCATGATTGTGTGGAAACAGTA
CTCACTAAACTACATTTTAACTACTACTGCTATAACCTATGTAAATCTAT
CTACTAAGTAATGTCCAGATAACATATTATCTGTAAGACAGATACTAGTT
CAATAGAAGCACTCTGGCATTGCCGTGCTGTATCTACAAGAAAGATTGGA
AATACAGAAGGAGTAGTGCATTTGTTAGGGTACAGTAGGTTGGTCTGTGC
AAGGGTTGACAGATTGGAAAGTCATCTACATGGCTTCTCTGGAAATGCAG
GGAAAGATGTCTGTTGTTGCAAAATATGAAAGTGTTGGATATCAGTGAAA
TAAATCAGTGTGCATCAATAAGTGTTGAGTAAGATATCTAATGCCACCCC
GGTATTATGCAGATATTAATGCCATATGTACATAATGTAGTATGTAAGAC
TATATTAAACACCTCATATTATGTACTGCATGTCTTGTTGGTTGTTCATT
TGTGTGGATGTATTTAGGAAGAAAGATGTGAAAGGTGCAAAAGTTATCTC
ACTGCAAACTAGCAAATAAAACAAGTCATCAGTCAGAAGTTTTTTCTGTT
ATTCTTTCCTCCTGTCTTCCTTTTTCATTACCTTTTTTTGTCAGTTCTTT
CCTTTATTTTCGTTCCTTTTTCCTCAGTATCCTCTTTCTTCTTACTTCTG
GTCTCCACACCAAAATATACTGGTTTATTGGAACTTCCATTGCTTAATTT
GAGACTTTCGAGGCTACATCATTCTATGGTCCCCAGTATATGATAACGAC
CTTACACATCGTAAGTTACAGTCTGGTGGGCTCGATTCAGACGTTTAATT
GGCCATGTCCTTGAGTGTCACCCACTCAATCCTCC Coding sequence (CDS) from alignment at Sc0000294:94924..101408+ >Blg02114.0 ID=Blg02114.0|Name=Blg02114.0|organism=Branchiostoma lanceolatum|type=CDS|length=486bp|location=Sequence derived from alignment at Sc0000294:94924..101408+ (Branchiostoma lanceolatum) ATGTCACACTACAGGGACCACGGTCCGCTCAACTGCAAGATCTACGTCGG GAACCTGCCCCCGGGAGCCGCCAAACACGAGATAGAGGAGCGGTTCAGTG ATTTTGGACGCCTGCGGAACGTATGGGTGGCGAGGAACCCTCCAGGCTTT GCGTATGTGGAGTTTGAAGACCACCGAGATGCCAGGGATGCAGTGAAAAG TCTGAGTGGGAAGCTGATCTGTGGGGTGCGGGCCAGGGTGGAGTTCTCAC ACGGGATGAGGCGACCGTCCCGCAGGGGACTGCCACCTCCCGCGCCATCT CGATCACACGACCGCCACAACTCCTCACGGTCCAGACGATCCAGATCCCG TTCTCCAAGACGACAGAGGTACAGGTCAAGATCGCGGAGCAGGAGTAGAA GTCCGCGGCGCAGTCGCAGCTACAGCAGAGACCGCTCCAGGTCAAGAGAC CGCAGGTCCANCACTGCTGAACAAAATATTGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg02114.0-exon-Sc0000294-1570713199:94924..95687 | Blg02114.0-exon-Sc0000294-1570713199:94924..95687 | Branchiostoma lanceolatum | exon |
Blg02114.0-exon-Sc0000294-1570713199:98405..98650 | Blg02114.0-exon-Sc0000294-1570713199:98405..98650 | Branchiostoma lanceolatum | exon |
Blg02114.0-exon-Sc0000294-1570713199:98897..100072 | Blg02114.0-exon-Sc0000294-1570713199:98897..100072 | Branchiostoma lanceolatum | exon |
Blg02114.0-exon-Sc0000294-1570713199:100258..101408 | Blg02114.0-exon-Sc0000294-1570713199:100258..101408 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000294 | genome | Sc0000294:94924..101408 + |
Properties
Property Name | Value |
GeneID | Blg02114 |
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