Blg02114.0 (mRNA) - B. lanceolatum

Overview
NameBlg02114.0
Unique NameBlg02114.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000294:94924..101408+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02114.0 ID=Blg02114.0|Name=Blg02114.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6485bp|location=Sequence derived from alignment at Sc0000294:94924..101408+ (Branchiostoma lanceolatum)
CATAAACATCTGTTATGTTCACAACACTATTTTACTACTTCCAACAGTGA CAAGTGGGAGGGGCATTCTCCAAACCATACCTCATAGCATAGCCAGACTA AGCTGTAGTGAACGGGACGTCACAGGCCTCCTTAGCTACATGCACGTCAA CACAGTACTCACAAATGAATAACCAGTGTACGCCTTGCAACATATACCAC TGTACAAGATGAAACTATATCTCCAGAAGTTTTTTAAAAGACATCCTCAC TCACTCAGTCAGTCAGTGAAACTGTAAAACTCCTGAACTTGTGAAGTTGT TTAGGCCTCCTTGAGGAAAGTTATCCGTGACCATACCTATTTCACGAAGA GAGGGCAACACCTCTTACCTTATAAACCGGAATTTTATGGGGTAAGCGTG GCCAGCAACTGGGGTTTATGGTCTTCAATGATCGTCAACTGAGTTTATTT TCCTGTCTGGTGCCGCCGCCATCTTGGATAGAAATCAAATTGTAACCATG GCAACCGACTCATTACGCATGCCTGATTATTCCATCCCAGCATCCTTTGC GTTCGCCGTTCGCGTCCTCCATCTTTTGCCACTAAGAGAAATTTCAACTT CTTTTATGCAGCAAAATATTTGCCAAGTTCGACGGCCAGTGACAGTATTT GTGGAGTGACATCGGCATGTCACACTACAGGGACCACGGTCCGCTCAACT GCAAGATCTACGTCGGGAACCTGCCCCCGGGAGCCGCCAAACACGAGATA GAGGAGCGGTTCAGGTGAGTTGTGCGCCCAGCTGGTCGGTAGACAATACC CGTTGGGGAACATGTGTTTTTTTTGTCGACCTTAAGTGAACCTTAACACT TTTTTGTGGTGACGTTGAGCATGTCTGTTGTGTTAAACTGACAACCCTGT AAGAGTTTTGAAAGGAACCTGCCACAGCCTGACAATGCCAGTGAAGGACA GCTAGCTTACGTGGCAGTCCCCCTGAACCCCTCACGGTATCCCGGATATG GAGGGGGTTTCATAGTCTCTACTAGATAGACTCCAGAGCCCTGATGTTGT TGGAAAACCTCCTTGGTTCATGTAACTCTGGTCGGCTAACTCCTCTGGCA TATCATTCAGCCTATTTGCCCAGTTTCTAGTCCCTGTAACTCGGGTTGGC TAATTATAACTCCTCTGGCGTCAGTCCATTTGCCCTACTATTTCCAAATA TTTCCAGCAACCTGGAGAACATTACCTGGTGCAACCCCAGGGGGTTGAAC GGACGTAAATAAGTAGTATTTGTATTTTCCAGGGATTCTACAGTCCAAAA GAGGGCTCATCAGATTGACATACCATATAGAGATTTGAACTTTAATATTG AAGACTCTACTTTGCTCTAAATATATAGCACAGTGGTCTATAAAAGCTTA GCCTGGATTCTAGACTATCACACAATAGATATTTTAGAGATTGGGCCATT GGGGGTCTGGCATCCAGGCTAGTAGTTAAAGCTATATTAAAAGTAGCACA TTTGTTAGCCTTGATGCCAGACCAGCACACGACACACTAATCCCTTTGGT CAGGGAAGCCCACACGACCCCTACCAGAGTTGGTACACTTGTCCATCGAA TGTTTAGATTTGAATCGAAGGACTGGCATGTATTGGATTTGATAAAACAA AGGGTCATAAAGTAAATGCAGTTGTCCTTAAATTTTTGATGGGACCTTTC ATAAAAACCCAGTCAGTCACTGACTATATCTATATAGCCAACAAGTAATT CATACTTCATACAAGGACAAATTTTCATTCTGCATTCAGTCAACACCTTC ATGCACAGTGAAATTTTTATGCTGCTTGACAAAATAGAGTCAATGTTAAA GCTTGAGACTCTGGTTTGCTTATTGAATTAATTAAGAGTCCTATGGATGT GTAGGTAAGTTTGGATGGTGAGGAGACAAAGACTGCTTCTCAGTAGGCAC GCTTGCCCCCAGGCTGATCATGGTCACATTTTTGTCTGTGGAGCACATAT CTCAACCAGTTTGTCAGGCTGCAGGGTAACTACAGAAACTGATGAATGAT AGTTTGATGAATGTNCAGGCTAACTACAGAAACTGATGAATGATAGTTTG ATGAATGTCTTTATTGTACTGTAAATGCGGTTGGCGGTGGTCTAATGCTC ATGGTTTTTGCTGTAACCTGCAAACTTAAAACCACTATGAAAATGCTGCC TACCTACTACCTCGTTTCAACCACGAACTAAAAACCACCGCAAACGCTCC ATTTTCTGTCTACCACGAAATCAAATCACTGCATTTACAGTAATTGCACA GGGAATGGATTGCCTCGCAGCATCTAGATCTCAACCAGTGTAGCCTGGAG AAATGTGTACTGGTTAAAATGTCAGTACAGACCTGGGTAGACTGAAGAGC TTTGTTCTCAGTAGCTTGTCCACATTCTTTCTGACAATTTGTCAGGTCTG TTTGGACATGTCAGAGTTGAAGATAGAGAGCCCCTTATCTTTGTATAAAC AGAACAGGTAGCATGAGGGCAATTTACAATAGCATTTTGCAATTGTTTCG CTGGGTGGAAAGAAATACTTTTAAGTTTTGCAGATGTAGTAACATGTACC AATAAAATGATTTTTTTTGATGATTTTAAAAAAGGACTATCTGAAACCTT TCAACTGAGGCCATACAAGGAGACCAGGTTATTGTTTAAACAACACCTGT TTGTTGTGAGTGGTTGTATCGAACATCAGCTTTAGCCATACAGGGTTGTG CTTTGCAACTTTTAAATCCTACCATTTTGGGTCATTGACCCCTATGTGCT ACTGAGTCTTAATAATAGATCTCTTAGGAGAGAAGTCTCAAATTGCTGCG CCGCCCTGTAATTACTGTATTTTGACTTTGTTCCAAAGATTTTCTCTTCA ACATTTAATTACCATCCAAACCAGACAGCCTTTTATGAAGTGGTTTGGTT GGTGTGCAAATTTCTGGAGTCCCCGCCTATATACTGAGAGTTCAACTTTC TCATGTAGTACTTAAGATTTTCTTAAAATGTACACTTAGCACATCCTCCG GCTATAGCTATTTTATTAGATCCATCCATGGGCTAGTTACATGTGTGCAA GTTGCAACAAAACATTTTTTTGTGTCCCAGTCAACTGTAAACCTGTACAG TCAAGCATAGCTTGTTCCCACACTCAGTAGTGTGGTGTTCTGGCACACTG CCATGGGTGACACCAGATCCAGTTGTGTTCTTGATTTACTTCTGTAAGCA GATATGTTGACAAGTCTGGCTGTGCATCTCATACAAGGTCGGTCTCTTTG CCATGTCACTGCCAGTCAACACATCCAAATTTACTAACTAACCATGTTAC ATTCTGTTGCTTAACTACATGCTCTGGGTTACATGGGATACTATACATAT TCAGAATGCAAAGTGTACCAGTACATTTGTTACAGCTAAGATTTATTGAT ACATTTCTTACATTCCTTTTTTTCTGTGCAGTGATTTTGGACGCCTGCGG AACGTATGGGTGGCGAGGAACCCTCCAGGCTTTGCGTATGTGGAGTTTGA AGACCACCGAGATGCCAGGGATGCAGTGAAAAGTCTGAGTGGGAAGCTGA TCTGTGGGGTGCGGGCCAGGGTGGAGTTCTCACACGGGATGAGGCGACCG TCCCGCAGGGGACTGCCACCTCCCGCGCCATCTCGATCACACGACCGCCA CAACTCCTCACGGTCCAGACGATCCAGGTATGTTATCTCAGGACTCAGGA CACCTGCTAGCTGTATGGAATAGATGCAGTTATCATTGCAGCTCACTTCA AGGTAGTGTCTCACTAGTGGCACCACTTGGACCAAGGCCAACAAATCCCT TGTGAGTTGATAGAAGTGCACTAACAAACGTAGCACTTGGGGATGGCACT AAGATCTTATTTTGTAAACTATAGGACTGTGATAGTACTACTAAGTGTTA TAATGTGTCCAATCATATTCCAGATCCCGTTCTCCAAGACGACAGAGGTA CAGGTCAAGATCGCGGAGCAGGAGTAGAAGTCCGCGGCGCAGTCGCAGCT ACAGCAGAGACCGCTCCAGGTCAAGAGACCGCAGGTCCANCACTGCTGAA CAAAATATTGTGTAGTGTGTGTGCATGTGTGTGTATGTGTAATATCTATC TAGCTGCAAAGCATGCAATGTTTGATATAGGCATATGACACATATGATGT AGTGACCCAGCAGATAGCTCTTGGATGGCAATGATATAATCTTGCTGTCA TTATATAGAACCAAGTTTCTACATTTAATTTAATGTCTTGGATGTGTCTC CTCCGTTTTCAGAGGAAGCTGTTATACATGTACTTATTAATCAGCATATG ATGGTGGGTTTAAGAGTTTCCAACTTTTTACAACTTTTCATAAGGGAACC TGGTGGTGTCTATGTGGCTTAGTCTGGTATTCTGCACTGCCTCTGCTGGC GCTCGCTTCAATGCCTTGCATTTTTATCAAACGATCAAAATGAAGCGAGG AAAGAAGAAATTAATTTTTGTCTTTTTGTTTTCACAATTAGAAATGTAAG TAAAAAAGGTTTGGTGCATAACCTTGAAATGTCTCATGAATAATGCAGCT TGATGTCCATACTGTGGTTTGGTTTAGTCATGTACATTGGCTGTTGTATG AAACCATTTCCACCTGTGAAAATCAGTAGGCACGTCTGTGTGAGCAGGTA CTGAATGTTGAACCTTACCTGTAGCTCCAGTACTGACTGTTGTTGTTCGT CTGGACGCCCCAAGACTGTCCTTTGTTGTGTACTATGATGATGATCATGC TGTAACATTCCGTTAACAGGAGGCATGTTCCCCTGCCCCCCAAATCAACC GAACAGCCGTCCAACAAATGGGCAACCAATCAACCCAACTGCCCTGCCAA TCAACCACCCAGACGACATCTGAGGCCCAACCCCCACAACCAATTCTCTC AACCATCCAACCCCACTTCTCCCAACTAGACCAGCGGACAACGGGGGTGC CTTGTGCCACGCACCTCGCACCCTGTCCCACCTAGCATCACTATCTGCAT AGTGAACAGGCAACGCAGATAAGTCAGCATCCCTCCCGCCGCACGGGAGA CAGGCAGGCCTCGCTCTAGCAGGTCATAGGTCGTAAAGCCCTTCAAAAGG CAGGTAGATCCATACAGAAATTACAGTAAAAAGATCTGTTTTTTTTTCCG TTGCNGCAAACTAGTGTTTTTTTCTTTCCAGTCTTTTCTCCTCCTCTTGA TAAAATGCTTTTTGCTTTCATTTTGCACATTTGTCAGTGTTTCCTGTCCT GTGGTGTTGTGTGTACTGACCGTTTTCTCCACAGCAACCCTGATGCAGGA GTTCCTACAGAGACAGGCAGACAACATGACACATCACAGGCTGTGAAGGA TGGGGCTTTAGCTGTAGTTCCTATCTGTGGTAGTTGATAAACTACTCTGA AAATGCTCGAGTCACAAAGTCATGACATACATAGTGAATCTTTCAGAATG CAGGACTATGAACAATTTCTGCAACAACGTTGGACAGTTAAGTGCTGTGA CAGAACAGCTGCTGTAATTGGAGATGAACAGCTCCTTGTTGTACCCAGAA CTCCACTAAACTTTTATTCCATGGCAGCTCATGATTGTGTGGAAACAGTA CTCACTAAACTACATTTTAACTACTACTGCTATAACCTATGTAAATCTAT CTACTAAGTAATGTCCAGATAACATATTATCTGTAAGACAGATACTAGTT CAATAGAAGCACTCTGGCATTGCCGTGCTGTATCTACAAGAAAGATTGGA AATACAGAAGGAGTAGTGCATTTGTTAGGGTACAGTAGGTTGGTCTGTGC AAGGGTTGACAGATTGGAAAGTCATCTACATGGCTTCTCTGGAAATGCAG GGAAAGATGTCTGTTGTTGCAAAATATGAAAGTGTTGGATATCAGTGAAA TAAATCAGTGTGCATCAATAAGTGTTGAGTAAGATATCTAATGCCACCCC GGTATTATGCAGATATTAATGCCATATGTACATAATGTAGTATGTAAGAC TATATTAAACACCTCATATTATGTACTGCATGTCTTGTTGGTTGTTCATT TGTGTGGATGTATTTAGGAAGAAAGATGTGAAAGGTGCAAAAGTTATCTC ACTGCAAACTAGCAAATAAAACAAGTCATCAGTCAGAAGTTTTTTCTGTT ATTCTTTCCTCCTGTCTTCCTTTTTCATTACCTTTTTTTGTCAGTTCTTT CCTTTATTTTCGTTCCTTTTTCCTCAGTATCCTCTTTCTTCTTACTTCTG GTCTCCACACCAAAATATACTGGTTTATTGGAACTTCCATTGCTTAATTT GAGACTTTCGAGGCTACATCATTCTATGGTCCCCAGTATATGATAACGAC CTTACACATCGTAAGTTACAGTCTGGTGGGCTCGATTCAGACGTTTAATT GGCCATGTCCTTGAGTGTCACCCACTCAATCCTCC

Coding sequence (CDS) from alignment at Sc0000294:94924..101408+

>Blg02114.0 ID=Blg02114.0|Name=Blg02114.0|organism=Branchiostoma lanceolatum|type=CDS|length=486bp|location=Sequence derived from alignment at Sc0000294:94924..101408+ (Branchiostoma lanceolatum)
ATGTCACACTACAGGGACCACGGTCCGCTCAACTGCAAGATCTACGTCGG
GAACCTGCCCCCGGGAGCCGCCAAACACGAGATAGAGGAGCGGTTCAGTG
ATTTTGGACGCCTGCGGAACGTATGGGTGGCGAGGAACCCTCCAGGCTTT
GCGTATGTGGAGTTTGAAGACCACCGAGATGCCAGGGATGCAGTGAAAAG
TCTGAGTGGGAAGCTGATCTGTGGGGTGCGGGCCAGGGTGGAGTTCTCAC
ACGGGATGAGGCGACCGTCCCGCAGGGGACTGCCACCTCCCGCGCCATCT
CGATCACACGACCGCCACAACTCCTCACGGTCCAGACGATCCAGATCCCG
TTCTCCAAGACGACAGAGGTACAGGTCAAGATCGCGGAGCAGGAGTAGAA
GTCCGCGGCGCAGTCGCAGCTACAGCAGAGACCGCTCCAGGTCAAGAGAC
CGCAGGTCCANCACTGCTGAACAAAATATTGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02114.0Blg02114.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02114.0-exon-Sc0000294-1570713199:94924..95687Blg02114.0-exon-Sc0000294-1570713199:94924..95687Branchiostoma lanceolatumexon
Blg02114.0-exon-Sc0000294-1570713199:98405..98650Blg02114.0-exon-Sc0000294-1570713199:98405..98650Branchiostoma lanceolatumexon
Blg02114.0-exon-Sc0000294-1570713199:98897..100072Blg02114.0-exon-Sc0000294-1570713199:98897..100072Branchiostoma lanceolatumexon
Blg02114.0-exon-Sc0000294-1570713199:100258..101408Blg02114.0-exon-Sc0000294-1570713199:100258..101408Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000294genomeSc0000294:94924..101408 +
Properties
Property NameValue
GeneIDBlg02114