Blg02790.7 (mRNA) - B. lanceolatum

Overview
NameBlg02790.7
Unique NameBlg02790.7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:1882738..1891536+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02790.7 ID=Blg02790.7|Name=Blg02790.7|organism=Branchiostoma lanceolatum|type=mRNA|length=8799bp|location=Sequence derived from alignment at Sc0000037:1882738..1891536+ (Branchiostoma lanceolatum)
TATGTCTATATCACATACAATTTTTTCTTTGGCTTTAAATTTTTCATATC TGCATATCATTTGGTAAAATATTCTAACGTTGGAGGTTTCACAATATTGA CCATTGAATTGCATGTCGATGCAGCTGTCATTAATTACCGCAAGCAAATA CAATCAATTTCAACAACATGGGAAGTGAAATCCAACACTGACCACAATTA TGGATTCAGCTCAAAATAACTGCTTTACCACAATGCGGTTTGCTGGTGGC ACAGAACCCAGCTCGGCTGAGGGCTTTGTGCAAAACGATACCATGAGTGA GGTTAGATCTGAGGCGACCCCGCGCTAAACGGCCGTCCTCCCCACAAATC ACCAAGGATTGCCCTGGACATCATTTATTTTTCGTCCCCGCCCCTTCTCG TTTTGTCCATTTTTTTTAACAATCGGGAAACTACTGACCTGCTCTGGCGG TAATCTCGGAAAGCTCTTGAACGGGCATGCTTGGCTGCAGGTGATCTGTA CGATTAAATCGGTGGGGAATGTCATAAATGAGACATTATTTCTCGTCAGA CTGGATGCACGATTCTGTTCCTCAAAAGGCAGCCATTTTGGGTGAGTCTA CTTGTACAGGTGGATGGGGGAGTTTTGCCTCTGGGAAAGAAATCAAGAAT TTTGAGGCATAAAACTTATCAAAGCTTCATTCATGGGCTTATCAAGTGAA AAACTATTTGATACTTTTCAAAAGAGTCCCTAAATGAGTTTTAAGTACAG AAAAAAAATCTATTTGAATGATGATTTAGGTACATTTTACATAGAAGCAA CTGCAGTATTGGCAAATATGGAAATGCATAAAAATGGCTTACATGGTGGC AAAACAACATTTTTTTCATCATAGCATTGCATCCAAATATACACAAAAAA ATTGAAATAAAAACAAGACAACCCTAATCACCCCCATAAAGTAATGGCAG TGTCCATTCCCATTAGCCATCTTGCACTGAGAGGTTAAAGTTCATTTCAA TCTGTGGATCAAAACTTTGTTGTTTACCAACTTTACCCTATTTAGCTCTC CGCAGCTATAGTTTGTCCACAATGAAGGAAGTGCCCATATCCACATGTGA ACGGGAATTCATCCTGAAAGCGATACGAGACAGAAAGGTTGGATTCTGTT GCTTCAGCGTAAAATGTGTTGGGGGGAGGGGGGCAAACATGTGCCATCTG GATCTCCCTAATGTATACGACTATCATGTTGCACAATGTTGACAACTAGC AATACAGTTCTGATCTACCTATAGCTATGTGTTTGTGAACTTAGTCATAT GAAATCATGGTGCTTCATCTTTACCTGTCTCATGTTGTTACATGTTATTC AATAATCTATGAAAGTATGATTCCTTTCCTTGAATCTTGAACTTGCAAAC TTTGATATTAAAGTCTGTGATGTCACACATGTTGCCTATGATTATTTCTA TGCCTGCTATTGCTAAGAGTTGTGCTTTCCTCCTGCTGTCATTTTTACAG CGCATCGATGGACGCCAGACGTACGACTACCGCCGACTGAAGGTGTCGTT CGGCATGGAGCGTGGATGCTGTATTGTTGAGCTGGGAGACACAAAGTAGG GGCAGCCATTACGCACAACAAGATTGTTCACTTTTGACANATTATGCACA ACAAGATTGTTCACTTTTGACAAACATTTAAGCATTACACACAACATAAA AAAGATTGCTCTGGGGAGCTTTCAAGACGAATTCTCTGTCTCTTCGTCAA CCCGGTAATAAGGTCAGATCTCGTCTTGGAGTTCTCTTGTCACGTGACTT GATATTGATAATCACGTGACAAGAGACACGCGTGCGCTAGGTCAAAGGTA AAGGCCCCTGAGACAGAAACAAAACACGTCCGATAGTGTTATTCAAATCT ACCAATATGTAAAGATCATGGCCGAGACAAGAACTGTTTTCAAGTCAGGG GCCTTGACCATGGGCATGGCGTATATGAAATGGTGAATGAGCTTAGTTTT ATCAATAGTTCTAGAAAACAACACATTTTTCAACACCTCAATCCTGCTTG CTGATAACTCTGGTTCTTGAAGACAGGACAATTTCTTGTGTTTTTTTCAA AACATCATTCATTTGCATCTGAATATGTGTTGGAAGAAAGTTAAACTGTA CAAATGATGTCATTCACAAAGAGCTGAACATCCATGATTCCATGCTACTG GCTAATTACTCCGTGATTGATTCCCCAGGGTTCTTGCCCAGGTGTCAGGT AAGATCGAGGAACCCAAGAAGAACAGACCAACAGAAGGGTCCATCATCAT CAACCTGGAGCTGTCACCAATGGCCTCGCCTGCCTTTGAACCCGGAAGGT AAGAATGTTTGTAGTTCTGTTGCTGTTCTCTGTGATTTTTAATGAGTCGT TTCTTTTGAAATTTATGAATATTTTCAAATGAATGGGATGTATGAATTAC CTATAATTCAAACTGTTGACTGTCTGTCAAATGCTAATAAAGTTCTTTTT GACGTAAAGAAAATACAGATTCTGTAAATGCAGAGATTTTGGCTGTTGTT TAGGTTTGCGGTTTTTGCAGTGACCTCATCAACCTTAAAACCACATCAAA AATGCTTGCTCTGTGTTCTGCCAGCCTACACTTTTGTTTTAAACATAAAA CTTGACACCACCACACCTTTTTCTCCCTACCGCAAAATTAAATCACTGCG AACTTAGATGCAGTTACACTTACAGTACTTCGTAAACTTGTGTCCACAAT AAGTGTGTAATGTATTTACCATCATTGTAATACATATTCAAATGCTGTTT TAAACACAAATTCATTCTTATTCAAAATTTCATCCAGTAGCTTTAGTAAC TGTTAGCTTGCGTGTCTTATTACCTTGATGTCTAACCTTCATTGACAAGC ATTTATAGTCATATTTAGTTAACATAGGATGTATGAATTTACTATAAGAA GATTGACTCATCATGAAAAGAATCCACTGACGAAGAACAGAACTTCATGT TGTTATTTTGTGGTTATTTATTGTGGTTATTGCAGGTGCTAAGTTAAGTA AATACAGCAGTAGGAAAAAGCCAACTTGAATTAACTGTGTAACATTTCTC CATACAAGACCCACAGAGTCTGGAATAGAGATGAACAGGATCCTGGAGAG GAACATCAGAGACTCCAGAGCTGTAGACACAGAGTCACTCTGTATTGTAG CTGGGGAAAAGGTGAGGTCTAACTCTTATCATATCATACAATATCATATA GACTTTTCGAATAAGAGGCAGTATATTGCCTTTGAGATCTGCTTCTTAAG CTAGTGTCCAGAGTTCATTATTTTCAAACTTTATATTAAGAGTTTATGTT GGGTTAAGCATGTACTCCTTGACAAACCCTTTGACAAACTTGGACTCCTG GATCATGGTGCCAAGTCACTTCGCGGCCCTGTGTGTAAACAGACCGCTCC TGAGTCAAACTTCGGCTGAGTGTACTTTGAAACACGTGTGTAAACCCAGC CTTAAAGTATGTTATCAGTAGGGATCCATAAGGAAAAGATTTTGATCTCT GCTGATTGTGAAATACATTTTTGTGATAATACTATACTTCCCTTTACCCT TCAGGTGTGGTCCATCAGAGCAGACGTCCATGTGTTAAATGATGAAGGAA ACATCATGGACGCAGCCAGCATCGCAGCCATTACAGCACTGGCTCACTTC AGGTATAATGTCCTTATTTTCCCTGTCAGTTGTCTGTGTACCATACTGAT AGTCTGTGCTCATACTGTGTTCAATGTTAACCTCCTTGTTGCTGTGCTAG TCTTTTGGCACTAAATTATATAACACACTAAATTATATAACAATTACTGT ATTAGGCAATAGGGAAAAGGTTAAGAATGGACCTTAGCTCTTTTTCCTTT TTTGATTTTATACAAATTAGGAGATGATATGAATTCATGTATACAGCATG TGGTACCCTGGAATGAAAATTAAATTGTTTGATGTAGGCTGTAACATTAT AGTGTAATTTTTTTGTGGCTTACAGGAGACCAGATGTAACTGTTATGGGA GAAGAAGTTACCATTGTAAGTACATGTACAAATACAAAAAGCTCTTTTAC TTAAAATTTCTCTCTGTGCAAAATAATGTAGAATAGAGAATTTGTTAACT TCACCATCACAACACATGATATGACAAAATACAGTGATCCAAATGTAAAG TTGATACATAAGAATTTGATGATAAATCATAACTTTGCAATGAGAACTTC TATACATGTATTTTGCACAGCATTCACCAGAAGACAGAGATCCTGTACCC CTCAGTGTTCACCACATGCCAGTCTGTGTCACATTTGCTTTCTTTGACCA AGGGTAGGTTTTGGTTTCATGCTATACTTGCACTTGTTTCCTCAAATAGG TGAACAGGATAATCTCCTTATGCTTTGTGCTTTGTCTTTTTCTTGAGGTC GATGATACTGAAAATATGCAGTGGAATCACTGCAGCATTCTCCTATGCAG AGCCTCTCCAGCGGCCTATACTATATACATGTAGCTTTACCCGGTAGGTG TCTTTGCTAATCCAGGCTAAGGTTTCCACTTTTGTGGGTGTGACCGCTAA CCCGCCAATCAGAGAATTGCCCAACTTCTTTGGGTGAAGCTTATTCTCTG ATTGGCTATCAGCTGGTAATAGGCCATGCTCACAAAAGTGGAAACCTCAG CTTGGTGTAGCTGAGCCTTTCCACAACATAGTATATGGTATAGGCCTCTA TCAAGGCTCTGTGTAGGAGAATGCAAATGGATGGGATTTCAAGTTCAACT GAAAACATCTCCTGCATGTAGGGAGTTTCTACTGGTGGACCCTAACCGTT TGGAGGAGCGTGTGATGGATGGGAGGATGGTGGTGGGGATGAACATGCAC AGGGAGATCTGCACACTCATGATGAGTGGGGGCATGCTGCTGGTTAAGGA ACAGGTAGGACAACAGTTCACAAGCTTTCTTATGTAATGGTACTATACTG CACTGCTGCTCTGGTGAAAATGATTAACTTTTAGGACACTGAAGTTGCCG TCTGGCACCCAATTCCATATTGGTTATAGAGTTATGAAGGAGGAAGAAGG TTAATGTTATGTCACTATATTTGGTTGGAGGCCCTTTCCCATTTACACCG AGGCCCTCTGCCTGTTAGCATTAGAACTGCAATATCAAACATGCAGATGC ACTTTGTTGCAAATACATTAATGACTCCTGTTTGTTCTCATGCCCTCTTT AGGTCCTGAGATGTTCCCAGATTGCTACAGTCAAAGTGGCAGAAATCATA GAGCTAATTCAGAAGGCACTGGACAAGGATGACCAGGCAAGGTACCAGAA AATTGCCATCTATTTGATTGTTGCAAAAGGACATTGCTATAAATGGCATT TTCATTGTTACAACCAAATTACAACTATCTTGAAGTCAGTGGTGTTAGTA AGTTCAGGGGCTGCAGGCAAGATTATTGTTTTTAACCTTTAGCACTCTAA AGTAACTGTTTGGCGCCACGTTCTCGGTTGGTTCCAGAGTTAGGCAGCAG GAAGAAGGTTAAGATCACATCAGACCCACAAAGACTAAGAGACAGTCTTA AATTTATGATGTTCTTCTTTTCCTATACAACATTGTGTGGATTTCTTTTC ACTTAGGCAAGCTGGGGAGAAGTGTGGCTTTGCAGAATCAGTTCCAGCAA ACAAAATAACCACAAACAAAAAGGAGCCCACTCCGATAGACACAACAGCA GCAGCACAACAGGCCAGTCAAGTCATACAGGAGGCTGGACCAGTGGACAA ACCGTATCCTTGACCGTGTCCACTCATTGGGAAACTGACCGCAGTGGCAG TTTGGTTGGAGCAGCTAGGGACAGTAGTAAGGCCTAGTAAAGAAAATGTT GTGTTTCCGGACAACAGCAAAAATCAGCCGACCCTAGTCTTCTTTTTCGC AATGGGAGGGAAGCTGTGGCTACATCAACCCTATTTATTCAGGCTGTAAC TGGAAACTCAACATTATTTCCCCTAGGTCTAAGGGGATGGGTACAGCAAG GAATGAGTATCTGCAGATTCATTCCTGACTGACATGACTGGTTCATGTTC AATCTATTTTCCAATAATCACTATTTTGATTTCAGTCATTCTTCCTTAAC TATGCGTCCCTGACAGAATGTCCAATATGATTGTACAGGTGAGTTAAGCT CATCACCAGTTTACAGTCTGACATGTTGTATTTTAATCAGAAGCCATCAA GGCACACTCACAATTTCTAGGTATTAGAGTATGTGTCTTAGGCCTGATTT ACTCACACGATTTTCAGTCCAATTGGAGACGACTCAGGACTGCGCAAGGA GAACCCTAGACCGTAAGTAGCATTCAATAGTCAGAAAACTCAATTTGAGC AGCCTAAAGCTCCTCACACACAGCCTTGAGTCAACTCCGAAAACTTGTCT GTAAATCGGGCCTTTCTTGGATTAAGTTTAACCCATGCGTATCACCTGTA GGCACCTGGAACAGCACAGATAGGTGAGGGACTGGTGAACACCTGGCAGG TAGATGATGAAGACATGGAGTCAGAGGAAGAAGAGGAGGATAGAAAGAAG AGTGTGACCAATGGGAGAGAAGCTGTGGCTACATCAAAACCTACTGAGAG AAAAAGACCTGTTAAAGCTGGTGAGGGTATTGGTAAATTCCTCTTTACAT CTGTCCATTTTTCGTTCTCTTGATTTATATTTAAGATTTAAATCAACTGT CCATCATAAATTCAAAATTATACAGGTTAGGATTTTGAAAAAGTATTTTA GTTTGGTACTTTGTTCTTTCATTCATGGAATCAATATTAACCTCCTGGAT GGAATGTAAATTTTTTAAACATATAATTATTGAAATCATGAAGTATTGGA GGCAGGTTGACAAAAACTTGAATGTTTGTAGATCAGTTGATTTCAAATGC TTTTTAAAACAGCATTATGAAATGTTTGCTTTTGGTATCAACACCATAGC TTCCCTTTGGGGTCTAGAAAAGTTGGTACATGTAATATGCTGTCCACATT TCAGTCTCCCATGCAGATGACAGTGGCAGTGAGGAAGAAGAAAAAGTCAT GCTGTATCAGGGAGATGCAGCAATGAAGTAAGATACCTTTATCATCATCT AATCTTGAGTCTCACTCACTTATAATGACTTTATCTTGAGTACCAAGCCA CCAGTTAAGAAAAGTATTACATTCTGCTTCTTGTACAGTCCTTCATTTGC TTGATACTTAGGAAATTAAAGCAGTCTTATAGCAACCTAGCATGTACAGT TCTATGAAGTAAAGAAGGAACATATCCGCCTTTAGATTGGCCATATCTTT CTTAACACAAACTGCTGATGATGATGACTACCATGTAACAATGTTAGAGG GAACTATGCTTCCTTTGCAAAGGTTTCAGCTTGCACAGCACTTTTCTTGG TTTATCATGTGACAGACCCTCTGCTGTGATTTTATGGCCTGTATTCTGGT GCTCACTGATAAGAATATATTGCAGGTCTGTTGAGTCGTAACTCACCTGC TCAAAGCCGGCTCCTAGTTTATGACTTTACATTCTTCATATTAAGAACAT ACATGATTGAGCTAGATATTATGGCTCTCTTTGGTTACATGTAATAAGTC AATTGAGTTATACTTTTTACTGTGAGGGAACTATGTTTTGGCATGTCTGT CTGAAATTTCTGTATGGTCTGCTAAGGAGGCTTACCATAATGAGGGTTAA GTCTGCTGTCTCTGATTGCCTTGTTCTGTTTATACAGATCCACAGAAGAC TCTACTGCACTCCAACAACCTTCCAACAGTGACAAACCAGCTAAGAAGAA GGGCAAGAAAAAGAAAGCTGCACAGAAATAACTCATCAAGCATTTTATAG ATACTACATAGTAGGGACAGAAAGATCTCATCTGCAAATATATGCAGATA TGCAAATCTAAGATTATAAAATCATTTTTTACCACCGACATACCATGTAC CTAGCTGTAAGTATGTGCTGTCTGCTATTCATATTTCGTTTATCATGATT TATGTGGCATTTCAGTCAATAAAACATCACTTAATCACATTTTCTGTTTG AATTTTCCTCATTGTCTTGGTGTTACATTTTACCCAGGTGCTACTTCTTA TACTTGTCACTATCTTTAAGATCATTCCAACCAATAAAATTTAAAAGTCC ATGTCAATCAATTTTGTATATAAATTATATTTAGACGACAAGAGTGACAT TTTCGAAGTAGCAGCAGAATATCTTTTTCAATGTTCATAATCCAGAAGGA AGTGCATGTATGTTTGCCTCGTGCGTCATTTATTTATGCTGCACCTCCTG GTGTATGAAAAGGCAAGGAAAAACTGACACAAAGTTCCCTTCATAGAATT TTAATGCTGTTCCTATGTTTATGATACAAAGTGATATAGGTAGGTACAAT GTGAATGAATATTACCCGTTAACCATCACCCTGCTGCCCAAGTGTAACCA GTACACATTTGGTCGCAAAAGGCTAGCTCAGTAGGGAGAAGGTTAAACGT TGTCCACTTTGAGAAGGAGTTACCAACAGCAGACTAGAGCTAATGAAGGA TGGTATGCAATATACTAGTAAGTCATTCCTCAGTTTTGTTAAATATCACT TAATTTACCACAGAATGAAATGTTACCTATATATGGGTATCAGGTAGAAA TTTTTACCTCCATTATAATGACATTTCAATTCATGTAAGGTCTTCCTACC ACTACTGAGAGTTGTCAACCCAAAACTACAGATGCAATAAAAACTCCTG

Coding sequence (CDS) from alignment at Sc0000037:1882738..1891536+

>Blg02790.7 ID=Blg02790.7|Name=Blg02790.7|organism=Branchiostoma lanceolatum|type=CDS|length=1074bp|location=Sequence derived from alignment at Sc0000037:1882738..1891536+ (Branchiostoma lanceolatum)
ATGAGACATTATTTCTCGTCAGACTGGATGCACGATTCTGTTCCTCAAAA
GGCAGCCATTTTGGCTCTCCGCAGCTATAGTTTGTCCACAATGAAGGAAG
TGCCCATATCCACATGTGAACGGGAATTCATCCTGAAAGCGATACGAGAC
AGAAAGCGCATCGATGGACGCCAGACGTACGACTACCGCCGACTGAAGGT
GTCGTTCGGCATGGAGCGTGGATGCTGTATTGTTGAGCTGGGAGACACAA
AGGTTCTTGCCCAGGTGTCAGGTAAGATCGAGGAACCCAAGAAGAACAGA
CCAACAGAAGGGTCCATCATCATCAACCTGGAGCTGTCACCAATGGCCTC
GCCTGCCTTTGAACCCGGAAGACCCACAGAGTCTGGAATAGAGATGAACA
GGATCCTGGAGAGGAACATCAGAGACTCCAGAGCTGTAGACACAGAGTCA
CTCTGTATTGTAGCTGGGGAAAAGGTGTGGTCCATCAGAGCAGACGTCCA
TGTGTTAAATGATGAAGGAAACATCATGGACGCAGCCAGCATCGCAGCCA
TTACAGCACTGGCTCACTTCAGGAGACCAGATGTAACTGTTATGGGAGAA
GAAGTTACCATTCATTCACCAGAAGACAGAGATCCTGTACCCCTCAGTGT
TCACCACATGCCAGTCTGTGTCACATTTGCTTTCTTTGACCAAGGGGAGT
TTCTACTGGTGGACCCTAACCGTTTGGAGGAGCGTGTGATGGATGGGAGG
ATGGTGGTGGGGATGAACATGCACAGGGAGATCTGCACACTCATGATGAG
TGGGGGCATGCTGCTGGTTAAGGAACAGGTCCTGAGATGTTCCCAGATTG
CTACAGTCAAAGTGGCAGAAATCATAGAGCTAATTCAGAAGGCACTGGAC
AAGGATGACCAGGCAAGGCAAGCTGGGGAGAAGTGTGGCTTTGCAGAATC
AGTTCCAGCAAACAAAATAACCACAAACAAAAAGGAGCCCACTCCGATAG
ACACAACAGCAGCAGCACAACAGGCCAGTCAAGTCATACAGGAGGCTGGA
CCAGTGGACAAACCGTATCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02790.7Blg02790.7-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02790.7-exon-Sc0000037-1570713199:1882738..1883328Blg02790.7-exon-Sc0000037-1570713199:1882738..1883328Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1883783..1883874Blg02790.7-exon-Sc0000037-1570713199:1883783..1883874Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1884238..1884332Blg02790.7-exon-Sc0000037-1570713199:1884238..1884332Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1884966..1885085Blg02790.7-exon-Sc0000037-1570713199:1884966..1885085Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1885846..1885948Blg02790.7-exon-Sc0000037-1570713199:1885846..1885948Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1886342..1886439Blg02790.7-exon-Sc0000037-1570713199:1886342..1886439Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1886763..1886802Blg02790.7-exon-Sc0000037-1570713199:1886763..1886802Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1887008..1887090Blg02790.7-exon-Sc0000037-1570713199:1887008..1887090Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1887559..1887691Blg02790.7-exon-Sc0000037-1570713199:1887559..1887691Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1887990..1888078Blg02790.7-exon-Sc0000037-1570713199:1887990..1888078Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1888394..1888925Blg02790.7-exon-Sc0000037-1570713199:1888394..1888925Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1889239..1889864Blg02790.7-exon-Sc0000037-1570713199:1889239..1889864Branchiostoma lanceolatumexon
Blg02790.7-exon-Sc0000037-1570713199:1890525..1891536Blg02790.7-exon-Sc0000037-1570713199:1890525..1891536Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:1882738..1891536 +
Properties
Property NameValue
GeneIDBlg02790