Blg02862.7 (mRNA) - B. lanceolatum

Overview
NameBlg02862.7
Unique NameBlg02862.7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000037:913085..917888+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02862.7 ID=Blg02862.7|Name=Blg02862.7|organism=Branchiostoma lanceolatum|type=mRNA|length=4804bp|location=Sequence derived from alignment at Sc0000037:913085..917888+ (Branchiostoma lanceolatum)
CACAGGCAAGCTAGACCGATACCAACATCTACTATACTGCGGGGTGTTGT ATTGTTACATCTAAGTCATATTATCATTTCAAAATGTACTTTTGTCTATA CAATACAATATTTCTTATTTTGGCATAAATTGTAGTATTCCAATATTAAC TGAGATGCTCTAATGCCACATGATGATTCAGTATTTACGGCTATTACAAA ACGCACCCCTCAGTAAATAGTAAACTCGTCTAGCTTGCCGCGTGTCACAT GTCAACCGGTCTCTTTTCTCTCCCGACCGCCATCTTGTGCTTGTATGCTT GCAACTCTCCTCTGGATCCTGCACCAAATCTTCAGTAAAATGGGAGACAA CAAGGAACGAAGCTTCATCATGATCAAGCCCGACGGCGTCCAACGCGGGC TGGTCGGAGAAGTCATCAAACGCTTCGAACAGAAGGGCTTCAAGCTCGTG GCCATGAAGTTCACGCAGGTATGGAAAAGGCATGTCATGACAAAAGGGTT TTAAATTTTCAGACTCAGAGGCTTGCCGTTGCACGTGTCGACGCTTTTGA GCATTTTTACTGCGTTTTCCTGTTTCCGAAGTTTGTTGGATGCAATCACT TCGTTCGGAATATTTGCTAACGTTATGACGTTATTCTGTGAGCGTTAATT TCTTTTGTTTGAAGAGATTTTGCAGAGTGTCAAAATTATGCACATGTGTA AAGACTGCAAACAAAATATGGCTCTGCAACAGTCGCAGCAGCTAATGTTT AACCTGGAATCCAGTCTATCGTCGTTAGGCAGGGCGCTCTTCGGGGCAGA AGGGGCTTTCCGCCGCCAAGATGAATTATCTTTGGCACCCAGTGTAGTAC TCTCCACAAGTCCAAGCAGAGGTTGGGCCCCGGCTGGTTTTTGACGTGTT TTTAAGCGTTTTGTCGGACTTTCTATTCTGTCCCGTTTTGTGGGCTGGCG ACATAAAGAAAACGGGACAAAATAGAAATTGCGACAAAAACGCCTAAAAC ACGTCAAAAAACAGCCGGAGCCCAACCTCTGCTTGGAGAGCAACCCGGTA AATAGTTTCGCGCGGAAGGGGTTTATTACCCTGGGAGACCAGATCCCATG AGTTCGGCGCGCACAGGACTTGCAACCCGCGATCCCTGTGCACACGTGGC GGACTTCTTGTTCTCAAATTCTGCACACATGTAGATCAAGAGTAAAATGT ACTAGACTATATCAAGGAGGTTGAATATTTAACCTCCTTGACTATATTAA AGAGTTCCTTGGTTGCCATACTTCAATTACTTGCATGGAAAATTAGATAG GCTTAAAATGTAAGAAATGATTGGCAGATGACGTCATTGTGGTGGGTGTG GTTAATCAATGAGCCAATCAAATTGTCTGTGTCATAACTTGTACAAATAT AGTGTTCTTTGTTGTTTGCAGGCTAGTGAAGAACATATGAAGACCCACTA CAAGGACCTGGAAAAACTGAAATTCTACCCTGGTCTGTGCAAGTACATGT CAAGCAATCCTGTTGTTCCAATGGTGAGGATACATTTCATTCTTGTGTCC AACACTTATGATTAACCTTCATCATGCGTGCTATATCAATTGTTCGTCAC AAAATTTGAACAGGTAAAGTAAACATGTTAACTTTCCATGTTCAAGGGTA ATTAAGAAACATTGATTGATGAGGTTGTGAATGAAAAAAAACAATGTGAT ATAACGTTAGCATACCATAGCAGCCTTAATCAGACACTTTTCAGCACTCT GTAAGTTGAGACCTATGCGTCTAAAATACTGTAAGGTAGACAACATAGAA ATATGCAATTTACCTTTGACACTGCACATGCATTGTCAACCATAAATGGA CTTATTGTGTCCTTTGAGACAGAATCCCCAAGGGACTTCAATATCAGAGA CACTCTTCTAGATTAAGAAATACACAGAAATTTATGTTCGTTTAGAAATC ATCCAACCCACTCATCGAAATTGTGGGACTTTTTATTTTCCACTGCTTTC AAAGAAAAATCAAACCCCGCATTGGTACCGTAGATATAGAAAATTATTGT ATACTAGTAATATACAGGGTGCGAAATACTTTTTTGAGCCAGGTTGCACG GTGTGCAACCTGGGTAGAAAGCTAGGTTGCCCGTCAGAATTTCAGGTTGC CCCACCTAAAATTCACTGATTTCTTGAAATTATATTTTGTAAGTACATAG TATTACATAGCCTTTAACAATATAACTGGTGCTTAATTGTGTTTTTGTTT CAAAATAAAATTCGATGATATACAATGTAAATAAACACCACAACCCACAA CAAACAAACTTATACAATTCATGTGTAACACGGCTATTTTTTTAGTACAA ATAAATCCTTTTTTCAACCCCCATAGACTTTTTGCTTTTTCTGCTCACTG CAATAGTTACACTGCAATAGGACTTGTACCTGCACATTATTCTCTTCCCA CACATAAAAGTTGCTACTGGGCATATTTTCATAATCTAATAAAAGTACCC CCGGAATAAAATTACCTATATTTTTTATTGAAAAATTCACAGGTGAGTTA TTAATGATATACATGTAAGATAAATACAATAGTCTATGTCATTGTCCTGT TTTTATCTCACTGTCACAACATTTTAACAACTTTGTTTATTCTATAATTA TTGTTGCCAAGTAAAGATTTTTTAAATCCCAGCTCATTATTAGTAAAGTG GCTCCATCTCCACTTCTGCAATTTTTAATTTTGCCCCCCAAAAAGCACTA GCCACATTTCGCCCATAGAAATACATAGCAACTCAAACACTGCCCTCTGC CAGTTGTTGCTGGTACTGCAGATCTCGCGCAATCACGCGATATCCAGCGA GAGTCGATGAATTCAACATGGCGGCCAAGAGCCGAGCGCTAAGATCTCAT TTATGTATTACTCCGAGTGGGTACCCTAAAAGAGTCCGTTGCCCAAAAAA ATGAACGGCTGCATGTACATGTGTCTATATCGGTGTAAAAATCCCTTTTA GCTAGGCCAGCTGATATCAAGCGTCAAACTGATGAAAGCTTGTTTGTAAC GGAAGAAATTAACAGGTAAAGTTCGGCAGCCGCGCGCGAGGTCGGACGTC CACAGCCGGACATTGGCGGTAATTCGGTCGATCACTTTCAGCTGGAAAGT GCCTATTTAGGGGGTCTAGCTAAGTGCCGCTTTTAATTGCCATAAAAAGG TATTGTATGCCAACTGGTAGTTGGCAATTTTTTCAAATGATCTAGGGTAG ATGAGCTCAACAGAGAATGAATGACATCGGTGCATTTCCTATAGCTTCAT TACGAACGCGCCCATGTAAAACACGTTTTATAACATGTAAGCCTATGGGG CGGAAAAACTCATGAATGAGACCTTAAGCCGCGCTCTCTTTCCGACAAAT TTGCATTTCAGGCACAATAAAACAGGTTGACTATGGATGCAAACGAGTGA AAAAGTATCGGTAACTTTATTAACTTGTTTAGTTGGGGGTCGATTTATAC GTTTGGTTTTAAAATTTACGAGACTGAGAGCGAGTGTGTGTGCACTCCAC ACGGGTGTGTGAGCTTCCTTGGTCCAATTATTTTTTACTTCGTCAAGTAC TTGCCGCAAAATCGATTTCTCCGGCCCAAAATTTAGGTAGCGCACCGCGC AACCTGGGTTAAGAGATAAGTTGCGCCAACCAAAATATTGTTGCGCTGCG CAAGTGCGCAACCGGGTATTTCGCACCCTGCATATAGTATGATCTTGTAT CACATGTATGCCTTATGTTTTACTTTATGTTTGTACTTCGACATTGTGGT CAACATGCAATTAGCCTACGGGCATGAATTTGCAATAAACTTATATTAAT TATCCAGCCAATATTTTCAAGCCTTGTATTCCAGCCACAGCTCAATAATC GGATGACTGATACATGTGTGCCTCACATTTATTCCAGGTGTGGGAAGGTC TGGGTGTGGTGAAGACTGGCCGTGTGATGCTGGGAGAGACCGATCCTGTA AGTCATTTTTTTAATCCATTTTTGCTGTTTAAATCTAATTGCACCTTACT GCCATTGTGCAACCGTTAGTTTGCTTGAGTTGCAAAGTACATGTTGCAGA ATTCAGAAAATAACCAATTTTGCTCAACTACCTTTTATATGATCTTCATA CCTGCACCAATGTTACAATCAGATTTCACTAACATAGACTAACTCATAAG CCCAGGATTATGAGCATGCATTCCCTAGGGTTCTGCTTCTTCTTTGGCAG TCNATGCAGTCCCTAGGGTTCTGCTTCTTCTTTGGCAGTCCAGTCTCTGG AGTAGATCTCTATGGTTTTGCTTATTACTACAATATTGTATGATATGATA ATGTACTCACTCCAATATGAAACCCATATTTGCAAAAGGTGCTCTTTGCT GACTTGACTCTTGGAAACTTGGTACGCATAAACCAGTGAAGATTAGCACC ATGCTGTAATTTATTTGTACTGCGTCGATGGCAGTCTTACTTTTACTTAA AGGAATTGCACTAACAACGTTACCAAGAGGATTAACGTTATGGGAAGACA AATTGTGCACCTGTCCATGAAACTCATCAGGGGGCCACCTGGTTGTTTAA TGGAGATCTAACTCGTGATTCCTTTTTTGTTCTCAGGCTAAGTCCTTGCC AGGAACCATCAGGGGCGACTTCAGTGTCCACATTGGCAGGTAGGTGTCAA CAACAACAAATGTTAAATGTTCCATTGTTATTCTGATGTAAGGGAAGGGT CACAGAATAATTTTTTTCAATTTATTCCTGTTTGAATGTATTTCTCCCAT AGGT

Coding sequence (CDS) from alignment at Sc0000037:913085..917888+

>Blg02862.7 ID=Blg02862.7|Name=Blg02862.7|organism=Branchiostoma lanceolatum|type=CDS|length=393bp|location=Sequence derived from alignment at Sc0000037:913085..917888+ (Branchiostoma lanceolatum)
ATGCTTGCAACTCTCCTCTGGATCCTGCACCAAATCTTCAGTAAAATGGG
AGACAACAAGGAACGAAGCTTCATCATGATCAAGCCCGACGGCGTCCAAC
GCGGGCTGGTCGGAGAAGTCATCAAACGCTTCGAACAGAAGGGCTTCAAG
CTCGTGGCCATGAAGTTCACGCAGGCTAGTGAAGAACATATGAAGACCCA
CTACAAGGACCTGGAAAAACTGAAATTCTACCCTGGTCTGTGCAAGTACA
TGTCAAGCAATCCTGTTGTTCCAATGGTGTGGGAAGGTCTGGGTGTGGTG
AAGACTGGCCGTGTGATGCTGGGAGAGACCGATCCTGCTAAGTCCTTGCC
AGGAACCATCAGGGGCGACTTCAGTGTCCACATTGGCAGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02862.7Blg02862.7-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02862.7-exon-Sc0000037-1570713199:913085..913552Blg02862.7-exon-Sc0000037-1570713199:913085..913552Branchiostoma lanceolatumexon
Blg02862.7-exon-Sc0000037-1570713199:914506..914607Blg02862.7-exon-Sc0000037-1570713199:914506..914607Branchiostoma lanceolatumexon
Blg02862.7-exon-Sc0000037-1570713199:917022..917081Blg02862.7-exon-Sc0000037-1570713199:917022..917081Branchiostoma lanceolatumexon
Blg02862.7-exon-Sc0000037-1570713199:917721..917888Blg02862.7-exon-Sc0000037-1570713199:917721..917888Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000037genomeSc0000037:913085..917888 +
Properties
Property NameValue
GeneIDBlg02862