Blg02937.3 (mRNA) - B. lanceolatum

Overview
NameBlg02937.3
Unique NameBlg02937.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000127:465304..468210-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg02937.3 ID=Blg02937.3|Name=Blg02937.3|organism=Branchiostoma lanceolatum|type=mRNA|length=2907bp|location=Sequence derived from alignment at Sc0000127:465304..468210- (Branchiostoma lanceolatum)
TACCGGTTGAACAACTGCACAGAAACAGACAACTTAGTACAGCGACCGCC CTTTTAACCCTTTCATTTGTTTCCGTTGTTACGTGGCCAAAAATTGCAGC TCCGGATTGCCAATAGTAGCCGCAGTTTCATGACTAGGTGCCAGCTAATG ACCTTAGTTTGCTCTTTCAACCTTTCACCTCGGCTTGGCTTTTTTTACAG ACAACAAAACTGAAGCTCGCTTTGTAGCTGAGAGCTATTTCTGCTGTGTT ATGTTTAGCGTGACGTGGCAAAACCTTGTGGTTCCGGAATGCAAATAGCA GCCGCGGTTTCATGATCAGGTGCCAGCTGATGACCTTTGCTCTTCCATTA CCTTTCACCTGCTTGGCTTAATTTGTTACAGACAACAAAACTGAAGCTCG CTTTGCAGCTGAGAGCTATTTCTGCTGTGTTATGTTTAGCAGTGTTGTCT ACTTAGTCCAGATCACGGATAAGGTACTGTCATGTCTACTGCTAAAAGGC TGCTGCAGTGGGTTTGCCTTCCCTTGATTTGTTTCGTTATGATTGTGGTG GTTCGAACCGTGACGTTTCCGTCCTACCAGACGCGCCCACCGCCTTGTAA CGCCACCGATCAGGACTTCATCCCCGCCACCAAGGACAGGCTGGACAGGC TCAGCCGGGCGGTAACTTTCCGCACCATCTCGTACGAACCGGGACGAGGA ACGCCCGAGGAACTGCTCAAGTTCATCGCCTTTATCCGCGACAGTTTCCC CGTTCTTCACTCCTCCCCGCTAGTGACGAGGGAGGTTGTTGGAAACTTTA GTCTCCTGTATCGTGTGGAGGGTTCTGATAGCTCTCTGAAACCGGGTCTC CTCGCAGGCCACCTTGATGTAGTTCCCGTTACAGAGGAACCAGGCTGGGA CGCTGAGCCGTTTTCCGGGCAGCAGAAGGACGGATTTTTGTACGGCAGGG GCACCATAGATTGCAAACACAACGTCATGGGGCAGCTGGAGGCCCTGGAG TTTCACCTGAAGAGAGGCCATCGACCGAAACGAACGCTGTACCTTGCGTA TGGACATGATGAGGAAGTTTCAGGCCAATACGGAGCGAAGAGAATTGCAG AACTGTTGGAGAATCGTGGAGTAAAACTTGAGTTTCTCCTAGACGAGGGC TTTACCGTAACCAAAGATTACGTACCAGGGGTGGCAAAGAAAGTGGCACT TCTTAGCGTTACAGAGAAGGGCTACTTAACGGTGAAGCTTAGTGTGCGGA TGAAGGGAGGGCACGGGTCTATGCCTGAGAAAGAGTCGGCTATAGGCGTT CTGTCCCAGGCCGTTACCAACTTGGAAAGAAACCCACAGCCGAACCTCTG GGGTTCTGGTCCTGAGCGGGACTTCGCTGTGCACCTCGCTACCGAAATGA GCCTCCTCCATCGTGTGATGATTTCTAACCTGTGGTTCTTCACACCCGTC ATTCGATGGGTTCTGGCCCAGAAGGCCGGCACTAACGCTTTATGCCGAAC CACTTCAGCCGTCACACGTTTTAACGCCGGGATCAAGGACAACGTCATCG CCCCCGAAGCAGTCGCCATCGTGAACCACCGAGTTCACCCCAAACAGACG ATCCAGGAAGTTCTAGATCACAACGTCAAGGTCATCAACGATCCCAGGGT CAAGATGGAGGTCGTCAAAGCTGTAGTTCCTGCTCCCATCTCTCCCAGTG GCCCGGAGTCCCCAGCATACATGGTGATACAAGAAAGTATCCAACAGGTC TACCCAGACTCACTGGTGGCACCATTTGTTCTGATAGGCAACACAGGTGT GTTTCTCCTGTACAAATTTTTCTGTTTTTTTGCTTGGTTTTGTTGTGCCC CATGTTTGTCCATCTTCCGTATATTTATTTGAATTTGCAGTTTCCCTTTG AATTATCTAATATCGAAGAAAAAAACAGGTGTGTCAGAAGAAAAGCTCAT TTTCTTTATCATTTATCATTTAATTCACTTTGGCACGTCTCCTTTCATTT CCTGCGTTTCAACAATTTTCCGTTCCTTCCGCAACAGATACTCGTCACTA CTGGAACCTCACGAGCGCCATCTACCGGTTTTCTCCGAACGTCATGGGTT CCGACGACTTCTCGAGATTTCACGGCGTGAACGAGAGAATCTCCATCAAG GACTACGAGAGGGTGATGAACTTTTATTTTCACCTGATGTTGAACGTTGA TAAACCGTTGGAGGTTATGAGGCACGAGCATGATGGGGATTTGTAACTTA GTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTA GTTTAGTTTAGTTTAGTTTAGTTTAGTTGAAGGTTAGACATCCAGGTAAT AAGATACGCAAAAAATAGTTACTCAAGCAACTGGATAAAATTTTGAAACA GTTGAAAATTTTATCCAGTTGCTTGAGTAACTATTTTTGGCGTACCTTAG TTTAGTTTAGTTTAGTCAGTTTAGTTTAGTTTAGTTTAGTTCTTTAGGTT AAGTATCTACTCAGTATCCTATTTATAGGATGTGGAATGTATGTCATAAA ATCAGTCGTCACCTTACAATTCTGTAAAGATCTTACAAAGCACATTATTA TTAGCGTTGCAGTAGGTAAAATGCTATTCCATAGAGTTTCAATTGAACTG GTTGTTATGCTGCTAGACGATAGAGTAATGCGCCTTAACATTTCTACATA GTTTTTGGTTTTTGCTCTGGCTGAATGCCAATATTCTAATACAGTGTCAA CTTGTCCAGCACCTGTGGTTATTACTAGTAGTTTATCTGGTGATTAATTC TTACCTTAAAGTGTTATAACTATGCAAGTCGGAGTTGGTTAAAGGTTTGG GACTCGTTTCACAGTTTGAAAATAAAACTGCTTTTGATCAAGCCATACAT TGATGAG

Coding sequence (CDS) from alignment at Sc0000127:465304..468210-

>Blg02937.3 ID=Blg02937.3|Name=Blg02937.3|organism=Branchiostoma lanceolatum|type=CDS|length=1524bp|location=Sequence derived from alignment at Sc0000127:465304..468210- (Branchiostoma lanceolatum)
ATGTCTACTGCTAAAAGGCTGCTGCAGTGGGTTTGCCTTCCCTTGATTTG
TTTCGTTATGATTGTGGTGGTTCGAACCGTGACGTTTCCGTCCTACCAGA
CGCGCCCACCGCCTTGTAACGCCACCGATCAGGACTTCATCCCCGCCACC
AAGGACAGGCTGGACAGGCTCAGCCGGGCGGTAACTTTCCGCACCATCTC
GTACGAACCGGGACGAGGAACGCCCGAGGAACTGCTCAAGTTCATCGCCT
TTATCCGCGACAGTTTCCCCGTTCTTCACTCCTCCCCGCTAGTGACGAGG
GAGGTTGTTGGAAACTTTAGTCTCCTGTATCGTGTGGAGGGTTCTGATAG
CTCTCTGAAACCGGGTCTCCTCGCAGGCCACCTTGATGTAGTTCCCGTTA
CAGAGGAACCAGGCTGGGACGCTGAGCCGTTTTCCGGGCAGCAGAAGGAC
GGATTTTTGTACGGCAGGGGCACCATAGATTGCAAACACAACGTCATGGG
GCAGCTGGAGGCCCTGGAGTTTCACCTGAAGAGAGGCCATCGACCGAAAC
GAACGCTGTACCTTGCGTATGGACATGATGAGGAAGTTTCAGGCCAATAC
GGAGCGAAGAGAATTGCAGAACTGTTGGAGAATCGTGGAGTAAAACTTGA
GTTTCTCCTAGACGAGGGCTTTACCGTAACCAAAGATTACGTACCAGGGG
TGGCAAAGAAAGTGGCACTTCTTAGCGTTACAGAGAAGGGCTACTTAACG
GTGAAGCTTAGTGTGCGGATGAAGGGAGGGCACGGGTCTATGCCTGAGAA
AGAGTCGGCTATAGGCGTTCTGTCCCAGGCCGTTACCAACTTGGAAAGAA
ACCCACAGCCGAACCTCTGGGGTTCTGGTCCTGAGCGGGACTTCGCTGTG
CACCTCGCTACCGAAATGAGCCTCCTCCATCGTGTGATGATTTCTAACCT
GTGGTTCTTCACACCCGTCATTCGATGGGTTCTGGCCCAGAAGGCCGGCA
CTAACGCTTTATGCCGAACCACTTCAGCCGTCACACGTTTTAACGCCGGG
ATCAAGGACAACGTCATCGCCCCCGAAGCAGTCGCCATCGTGAACCACCG
AGTTCACCCCAAACAGACGATCCAGGAAGTTCTAGATCACAACGTCAAGG
TCATCAACGATCCCAGGGTCAAGATGGAGGTCGTCAAAGCTGTAGTTCCT
GCTCCCATCTCTCCCAGTGGCCCGGAGTCCCCAGCATACATGGTGATACA
AGAAAGTATCCAACAGGTCTACCCAGACTCACTGGTGGCACCATTTGTTC
TGATAGGCAACACAGATACTCGTCACTACTGGAACCTCACGAGCGCCATC
TACCGGTTTTCTCCGAACGTCATGGGTTCCGACGACTTCTCGAGATTTCA
CGGCGTGAACGAGAGAATCTCCATCAAGGACTACGAGAGGGTGATGAACT
TTTATTTTCACCTGATGTTGAACGTTGATAAACCGTTGGAGGTTATGAGG
CACGAGCATGATGGGGATTTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg02937.3-exon-Sc0000127-1570713199:466415..468210Blg02937.3-exon-Sc0000127-1570713199:466415..468210Branchiostoma lanceolatumexon
Blg02937.3-exon-Sc0000127-1570713199:465304..466173Blg02937.3-exon-Sc0000127-1570713199:465304..466173Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg02937.3Blg02937.3-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000127genomeSc0000127:465304..468210 -
Properties
Property NameValue
GeneIDBlg02937