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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000127:385245..391645- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02942.6 ID=Blg02942.6|Name=Blg02942.6|organism=Branchiostoma lanceolatum|type=mRNA|length=6401bp|location=Sequence derived from alignment at Sc0000127:385245..391645- (Branchiostoma lanceolatum)
CAAGAACTGGAGGCGATAGCCCAGGGATATGACCCAGACCAGTTTTGGCA
AATTGCCATAGAAGTTGTTGTAGGGTCCAATTGTTATGTACACAGTTGTA
ACGACCTCAAAACCTGTTGGACGGGTTGTGGTTGTTGGTGCTGTGTATTT
TATAAAACACTGCAAGCTGTGACCGAGGGCTAAACACAGGTGAACCCACT
TTATTCAATCTTCTGAATATGCTTCTGAAATTAGGCATTAGGAAACTTAT
CTCGTGTATTCACTTGTGGCCACTGTTTGATACCATAACATTGTAATTTG
AAACTACCGTCCGCCGCACACAGAATGACGGTGCTCTCGGACGCCGGACA
GATGCTAACATTTTTTGGGAGAGTGTGTGGCAGAAATGTGCAATAAAGGT
CTCCATTCATTAATATCTTGCCGCTAATTACCTTTTATTAAGCAGCTATT
GTTCCCACCTTGGACTGAAGAGAGTTCTAAGGTCATATAAACGTCACTGT
CCAAGCAACAACAAAAAACATGACAAAACGGTCGTACCGCACACATCAGG
CCTTCGGTAACAACCTGTTTGTTGAGTCGGTAGAACGTCACTCAAAGTCG
ACCCCCACCATCATGGCAACTTGTACATTATTCATAGGGACGTTAGCTGG
ATTAGTCTCCAAGCAGACCCAACAGTTGCAAAGACCGTATCCAACATCCA
ACTGGCAGAAGGTGTTTTTATCAACCGTGCCTGACAACTTCTCTGGCTGA
CTAGAGCTTCTCTGGCTAGCTTGTAAGTTGTACGATTTTGGCACCGTGGA
GATCTGCTTGGAGATTAAGCTAGATGCCGTCGAAATGGGAATTAAAGATT
CTCTAGCTTACTAGTGATTTAGTGAGTTTGAGGTGTGTTGCCAACTGTTA
ACACAGGTAAATGTGCTTAACACGTGAATTGACTAAAATACTTTTCTGGA
ATAAATAAATGTGCTAAATAGCTAGAGCTTTATATTTCATCCTTATAGTA
CAGCAGTCAAGGTGTTCTTTTTCCTTCCATTGCGCTTTACAGTCATAACT
GCGAAGAAACAAAATGAGGCAAATATTTTGTGCCCTGCCCCTGTTGTTTC
TGGTAGCTGTGCCTTTGTTGCTATTCAACCCGTCAGAAACTGTCAGAAGT
GGTTACCCGGTGCGCTGGACACTGGTCACCCCCACCAGGTAAGCACCTCA
ACCAAGGAGGATATAACCTCCTTGCCTCAACGTACTTAATCTTTATGGAG
AATTTAAACTATTCGTCAACTTTGATAAAAAGATTGGACTGACCAGAATT
TTTGACTGAATTGCTCAGTCCTCTTCAGCTATCTGACCCAATGGTTCAGG
ACACTGAGTTGGTGAACAGTTTAGATTCTCCATAATGTAATTTACATCAC
ACACAATTACATAGATTTGCTTGTTCTTGCAATCTCTGCTTTAAAAGCTT
CCTTACATCTTCATTCATTGGAAAAGTAATTATAAAAAGATGAAAAACAG
TGGAGAACACGACACTGACAACAATGTTCCTAAGACGTCGGCAGGACAAA
GACATCAGTGGAAGTGCCCATCACCTCCTTCTTAAGATGCAAGAACACTT
GGCAGCTGTAAACAATTGATTAGTCACTGAAGAGTGCTACGAAGAGCTCT
ATAGCCTATTTCAGTAATTGTCCTTTTGGTTATTTTTCACGACATATCAT
AGAAAAAAGGACTAACAAATGCAGCAACTAAAAACCGAAAAAGGTAGATA
TGTAATATGTAGCTCTCTACCAATTAGAGCTCGATTTCGAAATGTTGACT
GGGACTAACACATGCCTGCAGCCATCTTGATGTATTCATGTGACTTTATT
TTCCTTTTCCCAGCTCTCCTCTCAAAGATCTGGGAACTGAATACAAAGAA
GAAATCAACAGTGCTACCAATACAACCATTGTACTCAAAGATACACCCAT
GGAAAAGCTGCGACATGTGATAGTAAGGTAAAGTAGCAACCTTTGCCATG
CATCTTCTCATCTTGTATTCCTTAAATATTGTCTTGAGGCATTCCCATAG
TAATGCTAGGGTCGCATCTCCAATCTAATATCAAAGTATATCAAAGGGAA
ATACACACAAATTTTGCAAAAGCACTTGTACTTCGGCAGGGTACAAGTAT
GCAGCTAGGTGTTGCTGCTGCAGTGTGAAGAATGTGGTCCTGACCGTTAC
TGAGTTTATACCCCCTTCACAGGAAATTGACTAAGAGTGAGAAGAAAGTA
CTGCAACGATACACGCCGAATGAGCTAGCTGCTCAGAGATTATTTCTCGT
CGACCAGGAAGCCGTGCTGTCCATACCAACGGAAGCACCAGGATGGGTCT
ACAACAAAACAGCTGCGGATTCATTTCGGTAAGAGTCACAATCGATGGGG
TGGCGGTGGGGGTGTGTGCAGTCAGGTGATTTTGAAAAAAAGAGTCTGTT
GTGTTGGTAGGACAAAAAGCTTGATTTAGTCAGGCTATGTTTCAAACTAG
CATTCATTCGTTTCCCTCAATTTTACAGGCATAGAGTAATAAGCGGTCAC
TTTGGAAACGGCAGTTTCTTAGTCACGCAAGAGAACACACATGTTAAGAC
CAACCTCAAGACTTATTTTCGGAAACCACAGAACATCAAAGTAACAACAA
AAGAACTTAGCCGATTTCCGAAGGTGGGTTTGAAACAATTACATTGAATT
TAACTTAACATTAATGACGATTTGCAAAAACATATAATAATTCAGCCTTT
ACATACAGTCAAACCTGCCCAAGGCGACCACCCGGCGGACCGAGCAAAAA
CGGTCGCGATGGACAGGTGGTCGCCATGAAGAGGATTCCACTCACATGTT
TCCAGGTCGAGGTTTTCAATACAGTACGTAAATGGATGGAAAATTATGTG
AATTTAGACAACATGACCCCCACCAGGTTCAATTCTCATTGACAGAAATA
TCCTACAAAAATTACATTTTCCGTTATCGTCGTAATAATTGTATACAGCT
ACATCGTGTACAAATTTTTTTCATAATTTTGACTACAAAACAATGGTTGC
CTCGATGATCTCGCAGCGCCCTCCCGCATTCACACGTTACATTAAATAGT
ACACACTTACACACACGCACATCATCAAAGTTTTAAGGCCTAAGACAAAT
CCCTAGAAAACACCTGCTGACCCCAGCCTTTTTTGGGGCGCCGACCGCTG
GATAAAAGGGGCAAAAATTTTTCGATCTGACAACTAAAGATGAAACGGAA
CGGTGTGATTTCGTCGCCCCGCATCGAAAGGTAAGTCAGTGCAGCAGAAC
GCACACCGTCCAATAAAGGTTTGTGAGATTCATGGAAATAAAAAGAAAAT
TAAGAATATTAATTTTAATTAATAACTAGAGTATTCGTAAATGTTCATAC
ACAAAAGCAACGTGTTTTAGAAAGGTCAGCGGTACGCCAAATCCGGCCAG
CGCCGAATCCAAGATGGCGTCGGGACCAAGGAACAACATTTCTCGCCCGA
TGTTTTGCCCGCCGCGAAGTCATTTTTCGGCGGAATTTAGTAAGACACAG
ACACATTTTTGTTGAAAATACAAGAAATAGATAGTAATTTCTGTGAAATC
TGACTTTTTGACGCCATGCACTACGTATTCGTTTTGAAAATTGAGTTTAA
ACCGAACTGAGTTTGCGGTAAACTATAAGATTACGATATGCACAACAACA
TTGAACATCACAAACATTTGTCTTTACAATGTTTATAGGGGAAACGTTTT
ATTAAACACTTCATGGAGGAATCGATGCTATAACATTGCTATTCCATATA
TTTTTGTCCTTATTTTTGTCCTTCAAAGTCTTGAAAACATTTTCGTGAAA
TCCGACAGCAAATGATCCAATGTCACCACATGCTTGAAAATTAGGCGGCC
GCCATGGCCAGGGATTGTGCTCTGTGCGGTCCCAATTCGTGGCGGTCGCG
GTCACGTTGGACAGGTGGTCGCCTTGGGCAGGCAGCTTAATGCTTGTGCC
TATGGGGAAAATTTTCGGGACCGAGAAAAAGCGGTCGCCATGGCCAGGTT
GTCGCGTTGAAAAGGTGGTCGCCTAGGCAGGTTTGACTGTATCTGTAAAT
GCATGACGCTCTAGTCAGGTCGAAGGTAAGAACGTACATGTAGTTCTAAA
GTTATGAAAAGAGTTTGTTCCATTATTTACTCACAGGAAAGCCCGTTTAA
GACCAGGCGTTTCAAGACGTGCAGTGTTGTTGGGAACGGTGGAATACTGA
ACGGAAGCGGCTGTGGAGAAGAGATAGACGCCTCTGAGTTTGTGTTGAGG
CAAGAAATACACACACATACACATATGCACACATACACACAGATGCACAC
ACATGAACACACACACACATGTACACACACACACACACACACACACACAC
ACACACACATAAATATATACACATACATACGCACACATATGCACAGGCAC
ATACACACACATGTGAACACACATACATACACATTACACACATACACACA
CATACGCATGTACACACTTACAGTTACACACGCACACACACACATACACA
AACACACATACAAACACACTCACATGCACTCACAAATACTCTTTCCATTA
CGAAAAGCCATTCCAATTGAAATACTTCCCACTTAACGTCATCCCTATAA
CTCAAGGGGGTGAAGTCTGCCACCTCTGATTACCCTGGTTCTAGGCTGAC
ATTGGATAGATGCACACGGATCAATGTTGTGCGAGAGGTATGGACAGGAG
GCCCATTATCGACATTGCCCGTCCTTCCCAAGACCTATCTACATACTAAA
TATTATCATCAAAATCCATCTATAGGTTATGCTGACCACAAATATCTGGA
AACATGAACACACCTATAACAATACCTTGATTTTTATGGAGTAAAAATAC
ACTAGGTCTTATACCACTGGGAGGATTTGTTGCCACATACGCCGCGCCCT
ATGACCACATAACCTACAGACATACTTATATTTGTCTTCTTTTATGTAGG
TGTAACACACCTCCAATGGACGATAAATATTGGAAGGACATTGGAAGGAG
AACCAATCTTATCACCATGAATCCCGGTCAGGTCAACTTTCGGTACGCTT
ATATATCCCAAATTCTAACAAAATGATGATACAGAAACAGCTATAATCAT
ATGCAATCTTTTCAAACCTTTCATGTGATTAATCATAATTGCAAAAAATG
CATATTGCATTCCATACGAATGAGGTTCTTTACATTGTCTTAAATGCATT
TGTTTGTTTGCTTGTTTGTTTGTTTGTTTGTTCACTGTTCAGATCTACGT
AATTGTAGATATCCATTGTAAGTCGTATACCTTGCATGTGTGAAGCTGTC
AACTTCGACCAGGGTGATATTATCCTCTTTGATTCCACCCACTGCAGGTA
CAATAGTTTTGGTAACAAAAAAAAATTTGAAAAGATTGCTTTTAAAAGAG
CGTCTAAGGCTTTTCAAGAGGCCAAAGAAGCCTTCCTTCAGGACCTCTCA
GTATACGGCGACAGCTATCTCTTCATCGAAGCCTTCCTGTATAAGCTGAG
CGCAAAGCGGGCCTTCCTGGCACATCAAGTTCTGCTGGAAAGTCACGCCA
AATACGAAGTTATCTTTCCTCATCCTGACTTCATAAGATCGGTGCATTCA
TACTGGAATGAAATTGGTGTGGTAGCTCCAAGGGTGTCTACGGGTACGTG
GCTTTAGGCTATCTCACAGTTTGGGTAAATCACGGTAAACTTTCAAGGCC
TCCGCCCATTCTTTTTCTGTATGCCATGGACCTGAAACTTTGAAATTTTC
CCCTCGACAATCCATCACACTGCACATACGCACTTCGAACTGTGAATTGG
CTTATTATATCATCTGATACAATCTTACTATACATTTTCTTAACATCTCG
CTATTTGAATACATGACCCTTCAAATCGGCCAAGTCCACCAACACATTCG
TTGTCATGGCAATCAATCTATCAAATTTTCTTGAGATATTTCATGAAATC
AATCAATCAAATTTTCTTGAGATTGCTTCCACCAACAAACTCACACACAA
ACGAACGAACTTAGAAGTGTAACAGCTTTTGGCGGGGGTAAAGTTGAAAA
TCTTTTTCTACATATCCTTTTTCCTACCTGTTTTATCCAGGATTACTCAT
GACCTCTGTGGCCACACAGATATGCGAGGAGGTGCACCTGTACGGCTTCT
GGCCCTTCCACTCCGACAGGAACAATAGACGCCTGACCGAGCATTACTAC
GACAATGCCCTTCCCAGCGACGCTCACAAGATATCCGAAGAGTTCAAACA
ATTGCAGCGTCTCCACAACACAGGAGTTCTCCGTCTGACAACAACTGCGT
GTCAGTGAGGGGACAACATTCTACAATTTGGCGCTGAACTTTCGATCCAT
C Coding sequence (CDS) from alignment at Sc0000127:385245..391645- >Blg02942.6 ID=Blg02942.6|Name=Blg02942.6|organism=Branchiostoma lanceolatum|type=CDS|length=1050bp|location=Sequence derived from alignment at Sc0000127:385245..391645- (Branchiostoma lanceolatum)
ATGGAAAAGCTGCGACATGTGATAGTAAGGAAATTGACTAAGAGTGAGAA
GAAAGTACTGCAACGATACACGCCGAATGAGCTAGCTGCTCAGAGATTAT
TTCTCGTCGACCAGGAAGCCGTGCTGTCCATACCAACGGAAGCACCAGGA
TGGGTCTACAACAAAACAGCTGCGGATTCATTTCGGCATAGAGTAATAAG
CGGTCACTTTGGAAACGGCAGTTTCTTAGTCACGCAAGAGAACACACATG
TTAAGACCAACCTCAAGACTTATTTTCGGAAACCACAGAACATCAAAGTA
ACAACAAAAGAACTTAGCCGATTTCCGAAGGAAAGCCCGTTTAAGACCAG
GCGTTTCAAGACGTGCAGTGTTGTTGGGAACGGTGGAATACTGAACGGAA
GCGGCTGTGGAGAAGAGATAGACGCCTCTGAGTTTGTGTTGAGGTGTAAC
ACACCTCCAATGGACGATAAATATTGGAAGGACATTGGAAGGAGAACCAA
TCTTATCACCATGAATCCCGGTCAGGTCAACTTTCGGTACAATAGTTTTG
GTAACAAAAAAAAATTTGAAAAGATTGCTTTTAAAAGAGCGTCTAAGGCT
TTTCAAGAGGCCAAAGAAGCCTTCCTTCAGGACCTCTCAGTATACGGCGA
CAGCTATCTCTTCATCGAAGCCTTCCTGTATAAGCTGAGCGCAAAGCGGG
CCTTCCTGGCACATCAAGTTCTGCTGGAAAGTCACGCCAAATACGAAGTT
ATCTTTCCTCATCCTGACTTCATAAGATCGGTGCATTCATACTGGAATGA
AATTGGTGTGGTAGCTCCAAGGGTGTCTACGGGATTACTCATGACCTCTG
TGGCCACACAGATATGCGAGGAGGTGCACCTGTACGGCTTCTGGCCCTTC
CACTCCGACAGGAACAATAGACGCCTGACCGAGCATTACTACGACAATGC
CCTTCCCAGCGACGCTCACAAGATATCCGAAGAGTTCAAACAATTGCAGC
GTCTCCACAACACAGGAGTTCTCCGTCTGACAACAACTGCGTGTCAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02942.6-exon-Sc0000127-1570713199:391457..391645 | Blg02942.6-exon-Sc0000127-1570713199:391457..391645 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:390458..390539 | Blg02942.6-exon-Sc0000127-1570713199:390458..390539 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:389669..389782 | Blg02942.6-exon-Sc0000127-1570713199:389669..389782 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:389268..389423 | Blg02942.6-exon-Sc0000127-1570713199:389268..389423 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:388973..389117 | Blg02942.6-exon-Sc0000127-1570713199:388973..389117 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:387347..387459 | Blg02942.6-exon-Sc0000127-1570713199:387347..387459 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:386554..386646 | Blg02942.6-exon-Sc0000127-1570713199:386554..386646 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:385953..386248 | Blg02942.6-exon-Sc0000127-1570713199:385953..386248 | Branchiostoma lanceolatum | exon |
| Blg02942.6-exon-Sc0000127-1570713199:385245..385505 | Blg02942.6-exon-Sc0000127-1570713199:385245..385505 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000127 | genome | Sc0000127:385245..391645 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02942 |
|
