Blg03027.0 (mRNA) - B. lanceolatum

Overview
NameBlg03027.0
Unique NameBlg03027.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000331:159921..162223-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03027.0 ID=Blg03027.0|Name=Blg03027.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2303bp|location=Sequence derived from alignment at Sc0000331:159921..162223- (Branchiostoma lanceolatum)
ACAAGATACAGCTCGAAGTGAGTTTATATCATGACAGTTAATATCATGAT ATTTCTACATACATTCTGCTACAGCACAAAACTGACTTGCACAACAACTT TTGAAGGTAGAAAAAGCATATTGCTTCTTGAGAATAATTCTGGGTACAGT TATGTTAATATGAACATCACTTAACAAGTCACTCAAAAAAGCTTGCACTT CCATCCTTTAACACAAGGGAAGCATGTACCTTATTATGAACAAAACAACC CACAACAGAGACATTATTGGAACAAATAATTGCTCATGTCTGTATTTTTA TTTCCTTTTCAGAACTATACATGTATTTCTCTTGTTCCTTATACAATGTC ATATAGGTGTACTTGCTGGAGATATCCAGCTTGTATTCTTCTCACCAGAG GCAATTCTACAGCAGCCATGGTGGGGCTGGCTTCGTGAAAAGAAGAGTGA CATCTGCCTCCTCGCATTAGACGAGGTTCACTGCATGACAACATGGTATT TTCAAATGTTCCTGATTGTTCCTGTTTTCCACTTGTCAATAAAATAATTA TAGCATTTTTCAAACACGGTTTTGATGGATTTCAATAATATCATAATAAT GATTGTGTTTCATAGGACTATACTTAAAGTGTTAATTTGAGAGGCAAAAC AAAGTATATAAATAAACTGTAAGTAGTTCTCACTCAGTGTCACAAAATGC ACTGATATCATAACATTATGATACAGTTTAGCCATTATATTACACAGGGG AGCATCATTTCGAGAGGACTATAAGAAGGTGCCAGTGATTAGGAGCATCA TCACTGCCCCTGTACTAATGCTGACTGCAACCTCAACTGACGGGATGGTG GGGGACATCATCCATGCCCTGCACCTCTCCCAGTCTGCAGTGGAGATGGT CTCTGTGCTACCCAACAGGTGATATATCAAATTTCCAAACTATTAAAGGG TCTTTATCAGCCTCCATGATGGCTCTAATATTGGTAACGCATAAATGCTA AGTAACCCTTTGTATAATTCTTATGGATATAGCAACAAATGCTGGTAAAT TGTTTCTGATTGATTGATTTATGTACAATGATAGTAACATATGTTTTGAC TTCAATATACCAGAAAATAACAAAATGACAACACTTCTAGGCCCAACATC CACCTGCAGATACAGAGGGCAACAGATGACATGAATGAAGAGTTGGGGTG GCTACTAAAGCACCTCAAAGATGGTGGGAAGGATGCTGCAAAAGCCATTG TGTACTGCAGGTATGTCCTATTTTGTTCCTCAACAACTTAGTACTTGGTG TTATCATGTAAATCAATATATTTTTGTTGTTACTGTTTAAGCTCATTAAC ACAACATTCATCTTTATTACCTGGGTGAAACAAATATATTTCAACTTTCA TGATTCATGGAAATCCTATCTTTTTACAGAACCATCGACTCAGTCACCTG TGTTTATGGGTGGCTGATGAGCCAACTTGGAACACCCAGTTCTCAGCCGA GACCAGTGGAAATGTTCCACGGTAAGACCGATGCTGAGACCCAGTCCAGG ATAGTGTCATCCTTCACAAAGGCGGAGACATGTATTAGATGTGTAGTGGC CACTGTGGCCTTTGGTATGGGCGTACATGTCCATGACATTAGGTATGTTG TACATTGGGGGCCATCAACTGACATCCTGTCGTACTGGCAGGAGGTGGGG AGGTGTGCCAGGGATGGCGAGGCCGATAAGGCACTGATGTATGTGTACCA TAGGTCCTTGAACCCTAGGTTTATCAAGAAGGACATGGTAGACTTGGCCA ATGGCAGCACAGCCACATGTATCAGGAAGGCCATTCTACAACACCTGTTT GTGAAGGGGATGAGTGCAACTGAACTCACAGTTGCATGCGGTCTGAGCCA TGGCTGCTGTGGCACGTGTGACATTGTGACATAAAATCATAATCATTCCT AATATCAAAGATTACATAGGACATTCTTGTGATTATAGATAATATTAGCA GTTAACTGTTTGTATTGTAGATGTACAGTGGTATCATTTTACTATAGATG TATCATTTAACAAAGGTGCCCTGGAGTGACTCAGTTACCATTAGCAGACA GTCTTGCCCAAAGGTCCATGTCTTGGGCCAGCTTTCTGATCTTGGCCCCC ATCTTCTCAACATTCTGTATTCCTGTCTTGTAATGGAAGTTGTCAAATCC ACCATGTGAGCGACCTGGCAGATATTCAAACAGGCCATCTCCCTTAAACT CCTTCACAAACTTGGCAATATCTGCCGCATATCTACCATCATGACCAAAG GTG

Coding sequence (CDS) from alignment at Sc0000331:159921..162223-

>Blg03027.0 ID=Blg03027.0|Name=Blg03027.0|organism=Branchiostoma lanceolatum|type=CDS|length=807bp|location=Sequence derived from alignment at Sc0000331:159921..162223- (Branchiostoma lanceolatum)
ATGACAACATGGGGAGCATCATTTCGAGAGGACTATAAGAAGGTGCCAGT
GATTAGGAGCATCATCACTGCCCCTGTACTAATGCTGACTGCAACCTCAA
CTGACGGGATGGTGGGGGACATCATCCATGCCCTGCACCTCTCCCAGTCT
GCAGTGGAGATGGTCTCTGTGCTACCCAACAGGCCCAACATCCACCTGCA
GATACAGAGGGCAACAGATGACATGAATGAAGAGTTGGGGTGGCTACTAA
AGCACCTCAAAGATGGTGGGAAGGATGCTGCAAAAGCCATTGTGTACTGC
AGAACCATCGACTCAGTCACCTGTGTTTATGGGTGGCTGATGAGCCAACT
TGGAACACCCAGTTCTCAGCCGAGACCAGTGGAAATGTTCCACGGTAAGA
CCGATGCTGAGACCCAGTCCAGGATAGTGTCATCCTTCACAAAGGCGGAG
ACATGTATTAGATGTGTAGTGGCCACTGTGGCCTTTGGTATGGGCGTACA
TGTCCATGACATTAGGTATGTTGTACATTGGGGGCCATCAACTGACATCC
TGTCGTACTGGCAGGAGGTGGGGAGGTGTGCCAGGGATGGCGAGGCCGAT
AAGGCACTGATGTATGTGTACCATAGGTCCTTGAACCCTAGGTTTATCAA
GAAGGACATGGTAGACTTGGCCAATGGCAGCACAGCCACATGTATCAGGA
AGGCCATTCTACAACACCTGTTTGTGAAGGGGATGAGTGCAACTGAACTC
ACAGTTGCATGCGGTCTGAGCCATGGCTGCTGTGGCACGTGTGACATTGT
GACATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03027.0Blg03027.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03027.0-exon-Sc0000331-1570713199:162207..162223Blg03027.0-exon-Sc0000331-1570713199:162207..162223Branchiostoma lanceolatumexon
Blg03027.0-exon-Sc0000331-1570713199:161729..161867Blg03027.0-exon-Sc0000331-1570713199:161729..161867Branchiostoma lanceolatumexon
Blg03027.0-exon-Sc0000331-1570713199:161306..161476Blg03027.0-exon-Sc0000331-1570713199:161306..161476Branchiostoma lanceolatumexon
Blg03027.0-exon-Sc0000331-1570713199:160964..161083Blg03027.0-exon-Sc0000331-1570713199:160964..161083Branchiostoma lanceolatumexon
Blg03027.0-exon-Sc0000331-1570713199:159921..160794Blg03027.0-exon-Sc0000331-1570713199:159921..160794Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000331genomeSc0000331:159921..162223 -
Properties
Property NameValue
GeneIDBlg03027