Blg03081.0 (mRNA) - B. lanceolatum

Overview
NameBlg03081.0
Unique NameBlg03081.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000111:469501..471486+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03081.0 ID=Blg03081.0|Name=Blg03081.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1986bp|location=Sequence derived from alignment at Sc0000111:469501..471486+ (Branchiostoma lanceolatum)
ATGGTTGTAGAGGTACCCATGTTCCTCTTCTGTGCCAGGCACAATGCCCA TGACCTCTCGTTTGGGTGGATGTACGATTCATCGGACAGTGTTCCTGGTA ACAAAGAGTTAGGATCCGTCAACCCTGGCAGATCATGTGGTGATTTGGAT AGTTCTCTGAGCACGATCTCTATCCAGGCCCCTGTAGTTTTCCTGGCTAC TGACGTCTATCTGGCAGACAAACCGGTCCCCAACACGCTTGAGCAGTGCC GGCAGGCTTGGGAGTACGATGGTGGCATTAAAGTGAGCTTGGTGGGAAAC TTGATCTTCCGGCTGGTTTCCATGGCCTCAGAAAGCGCAACATCTGGAGG TGTTGCCTTGGCATTTTTCCGGACACAAGGCAGGGATACACTCGCCACCA GAGAATTTGAAAGCAGCCAAAATCAGACCACCCATACAAACGCAACCCAT GTCAATACACAGAACATCAAATGCTATCTGCTTACAAGGGGTGAACACAC GAAGTTGTTCTTCACTGTTTCCCTGGTCCAAGGTCAGAATCCCACAGCAG AAACCACTTACAAAACCGGTACTGGCCACTCCAGAAGCCTTACATCCTAC TCCGAAACTACAGAGAAATATTACACATTTTCAAAACCGGGGGACAACTC TACACTGCAGGTGAGTATTACACCTGGACCAGTTGTTGAGGTGCTTTCAG GTCATGTTCTCATCTCAGTTGTTGTCTCGACAGTGGTCGGCCTGGCCGTG TTGTTCCTTGCAATGTTGATGTGGAAGGCGTGTGCAGCAAGGTTAAACGC TGAAGATGAGAGGCCCAGCGACGATGCACACATTTGGATGATCTCCCCTG GTGTTGCCTTCCCCGGCTTACTAAGGTCGGCTTCCCTCCCTGCATGTTCG GGCAAGATGGCGTCAGATGACGCAGCCTCATGTAGGTCATTGCCCGCTGT CCTGCATCCAATCGAACCTACTTACAGCGAGATCCCAGATGACGTAGCTG CTGCTCAGAGGCCCCTTCCTAGCCTCCCCCATGTATGCTGGGAGATCCCA GATCACATGGCCGCTGCCCAGAGCCCTCTGCCTTCTCACCCACGAACACA CCAGGATTTACCAGATGACCAAACCACTGCACAGCGCCCTCTGCCTGTCC TCTCACACACCTACAGTGCGATTCCAGATGATGAGGAAAGCGGACCCATG CCTATCTATGCTGATGCCCAGATTTTGCTTCATGTCGTTACAAACAGGGG ACAGAATCAACGGGCCTCCCGGGACAACGGCACCACTTCCTGTAGGCACT GGTTTGGACGATCCGATGCAACATATGGATCGGCTGAACAGACCAAATCC GAGAGTAATGCCTTCTACAGAAACGCCTCCGAGGTTGAATTCTTAAGAGC TCGTAGACAGCTGAGGACAGCGTTGGTACCCCAGTCTGTTGAACAAGGTG TGAGGACGTACGTCAACGCCAGAGATGCAATTCTGTCTAGAGGTCAAAAC GTCACAGAAGCTCATATCGCCTTTCTTACACTGCCTAACACATACTGGCC TTGGGAGATCCCAGAGGAGGGAACCCGAATCATACCACGACGTGCTTCTC TTCCCCATGTTACACTACCTAGCACCTACTGGCCATGGGATCCGGAGAGA CCTAGGGAAGGAACCCGTATCACACAATGGCGCGCGTCTCTTCCCTGTGT TACACTACCTAACACCTATTGGCCATGGGAGATCCCATGGCATGGAGCCT GTAGCACACCACGGCGTGCGTCCACCTCCAGATCACCTTACACTTATTGG CCTTTGGAGATCCCACGGGATGAACCCCGTAACACATTGCGGCCTGCGTC CCTCTCAACACTTCCTAATACCTATTGGCCTTGGGAGATCCCAGGGGAGG GAACCCGTATCACAACAAGGCGTGTATCCCTTCCCTATGTTACACTGCCT AACACATACTGGCCATGGGAGATACCAAGGGAGTGA

Coding sequence (CDS) from alignment at Sc0000111:469501..471486+

>Blg03081.0 ID=Blg03081.0|Name=Blg03081.0|organism=Branchiostoma lanceolatum|type=CDS|length=1602bp|location=Sequence derived from alignment at Sc0000111:469501..471486+ (Branchiostoma lanceolatum)
ATGGTTGTAGAGGTACCCATGTTCCTCTTCTGTGCCAGGCACAATGCCCA
TGACCTCTCGTTTGGGTGGATGTACGATTCATCGGACAGTGTTCCTGGTA
ACAAAGAGTTAGGATCCGTCAACCCTGGCAGATCATGTGGTGATTTGGAT
AGTTCTCTGAGCACGATCTCTATCCAGGCCCCTGTAGTTTTCCTGGCTAC
TGACGTCTATCTGGCAGACAAACCGGTCCCCAACACGCTTGAGCAGTGCC
GGCAGGCTTGGGAGTACGATGGTGGCATTAAAGTGAGCTTGGTGGGAAAC
TTGATCTTCCGGCTGGTTTCCATGGCCTCAGAAAGCGCAACATCTGGAGT
GGTCGGCCTGGCCGTGTTGTTCCTTGCAATGTTGATGTGGAAGGCGTGTG
CAGCAAGGTTAAACGCTGAAGATGAGAGGCCCAGCGACGATGCACACATT
TGGATGATCTCCCCTGGTGTTGCCTTCCCCGGCTTACTAAGGTCGGCTTC
CCTCCCTGCATGTTCGGGCAAGATGGCGTCAGATGACGCAGCCTCATGTA
GGTCATTGCCCGCTGTCCTGCATCCAATCGAACCTACTTACAGCGAGATC
CCAGATGACGTAGCTGCTGCTCAGAGGCCCCTTCCTAGCCTCCCCCATGT
ATGCTGGGAGATCCCAGATCACATGGCCGCTGCCCAGAGCCCTCTGCCTT
CTCACCCACGAACACACCAGGATTTACCAGATGACCAAACCACTGCACAG
CGCCCTCTGCCTGTCCTCTCACACACCTACAGTGCGATTCCAGATGATGA
GGAAAGCGGACCCATGCCTATCTATGCTGATGCCCAGATTTTGCTTCATG
TCGTTACAAACAGGGGACAGAATCAACGGGCCTCCCGGGACAACGGCACC
ACTTCCTGTAGGCACTGGTTTGGACGATCCGATGCAACATATGGATCGGC
TGAACAGACCAAATCCGAGAGTAATGCCTTCTACAGAAACGCCTCCGAGG
TTGAATTCTTAAGAGCTCGTAGACAGCTGAGGACAGCGTTGGTACCCCAG
TCTGTTGAACAAGGTGTGAGGACGTACGTCAACGCCAGAGATGCAATTCT
GTCTAGAGGTCAAAACGTCACAGAAGCTCATATCGCCTTTCTTACACTGC
CTAACACATACTGGCCTTGGGAGATCCCAGAGGAGGGAACCCGAATCATA
CCACGACGTGCTTCTCTTCCCCATGTTACACTACCTAGCACCTACTGGCC
ATGGGATCCGGAGAGACCTAGGGAAGGAACCCGTATCACACAATGGCGCG
CGTCTCTTCCCTGTGTTACACTACCTAACACCTATTGGCCATGGGAGATC
CCATGGCATGGAGCCTGTAGCACACCACGGCGTGCGTCCACCTCCAGATC
ACCTTACACTTATTGGCCTTTGGAGATCCCACGGGATGAACCCCGTAACA
CATTGCGGCCTGCGTCCCTCTCAACACTTCCTAATACCTATTGGCCTTGG
GAGATCCCAGGGGAGGGAACCCGTATCACAACAAGGCGTGTATCCCTTCC
CTATGTTACACTGCCTAACACATACTGGCCATGGGAGATACCAAGGGAGT
GA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03081.0-exon-Sc0000111-1570713199:469501..469849Blg03081.0-exon-Sc0000111-1570713199:469501..469849Branchiostoma lanceolatumexon
Blg03081.0-exon-Sc0000111-1570713199:470234..471486Blg03081.0-exon-Sc0000111-1570713199:470234..471486Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03081.0Blg03081.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000111genomeSc0000111:469501..471486 +
Properties
Property NameValue
GeneIDBlg03081