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Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0039671:235980..241597+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03446.1 ID=Blg03446.1|Name=Blg03446.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5618bp|location=Sequence derived from alignment at xpSc0039671:235980..241597+ (Branchiostoma lanceolatum)
AGTTCAAAACTCATTACCACAAACTTTTATTATGGACAAATATGCAAATT
ATAAATCTTTTAACAGTCAGAAGTGCAATATATATCCTATGAGTTGAAAG
TATCTCCTATGAGTTTGAAGAATGCAGTTTGCCCAATGATACTGAGGAAA
AATTGACAATCAAGTTTTTTAACACAGTCTAAAAAGTCTTTAACGACCAA
GAAACAAACCCTGCCGGCTTCACAATGAATTCCAAACTTCCCAAGAGTTT
CCGGACTGTGATTCTGTGCTCGTTAGCGAACTTCGTTAACCAGGCGGACC
GTACCATCATGCCGATCGCGCTCGTGCCGATGAGCAACGAGTTTGACTGG
AACCTGCAGGCTCAGGGCTGGATACTGAGCTCATTCGCCTTCGGATACAT
CAGTAGTCAGGTAAGGGCCTCGGGGGAGCCTGGAGTCAGGCTATAACACA
TAGACTGGTACCTACAGGTACATTAGGATACATACATGTAAGCAGTCAAG
TAAGAAGTATGAAATGTAAGAAAGTTTCTTTTGGACACAACATGTATGAT
CAAACAAAATGGTATAATTGTGATCATGAATTATTAATGTAAATGTTATA
AGTCTGTATATATGGTACTGATTACTCTGACTTTGCTGTGTGCTGCCCCC
TGTAGGTTATCGGCGGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTT
GTGTGTGCTGCCCCCTGTAGGTTATCGGCAGAAGTGCAGCCCTGCTGGTC
CCTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTATCGGCAGAAGT
GCAGCCCTGCTGGTCCCTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAG
GTTATCGGCAGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTTGTGTG
TGCTGCCCCCTGTAGGTTATCGGCAGAAGTGCAGCCCTGCTGGTCCCTAA
CAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTATCGGCAGAAGTGCAGC
CCTGCTGGTCCCTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTAT
CGGCAGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTTCTGTGTGCTG
CCCCCTGTAGGTTATCGGCGGAAGTGCAGCCCGGCGGTGGGGAGGGAAGT
GGGTTCTGTCTGGTCCCTAACAGTAACAGTCTGTGTGCTGCCCCCTGTAG
GTTATCGGCGGAAGTGCAGCCCGGCGGTGGGGAGGCAAGTGGGTTCTGGG
ATTCGCCGTCGCCGTGTGGTCCCTGGCGACCTTCTTCACGCCGACCTTCG
CGCGGACGCTCTACGGTCTGATCTTCGCCCGGATCTGCCTGGGGTTCGCG
GAGGGGCTCGGGCTGCCGACGATTTTCCACATCTTCGCAAACACGGTTCC
GATGGAGGAGCGGTCGCGGGCGTTCGGCTACCTGGTGGCGTCCGGGTCTA
TCGGACAGACGCTCGCTTCTGTGGTGAGTTCTAGGTTATGGGAGGCGTTT
TACTATAGTTATATATGAGGGCCTGCATGGGGGGGTCCCGACAACACTCT
ATGCTAAATTCGGAGGGCCGGCTACGTAATACGCTAAACTCAGAAAGCCT
CCCTACGCTCTACGCTAAATTATGGAGTGGTCGGCAACGCTCTACGTAAA
ATTAAAACGGCCGATTACGCTCTAAGTAAAAGGGGCATGCAGGCCCTCAT
ATATTAGTGTTGAGGACAAGAGTAGGAGTGATAAGACAAAAACTGATATG
TTTGTTCATGAAGTTGACAAATACAGGTTGGCTGGCTGTATAACTTTACT
AGTAGGTCTTTAGAATGTGACTTTTTAATGACAGCTGGCAGCAGAAAAAT
CGATTTTATGGAATGAGCCTCAAATCTTGTGTTGTCTGACTAACATCTCA
GAATTAAATACTACTTTTATTCATGGTTTTTTCAAGTACCAGAACTGAAA
TATAAAAGTACAGACGCTAAATAACCTTGAAGATGACAAGCTTTTGTAGT
TTTTGACAGTTTGATGTTGTACTTGCGCCCTCTTGCAGGTGTGCCCCAGA
CTGCAGTGGCCCATGATGTTCTACAGTTTCGGGGTTCTGGGGTTCGTGTG
GGTCGCCACATGGGTTCTCTGCTTCAGGGAGCAGTCCATCGACTACGATG
AAGAACTCTTCCTTCCGCCCAAGGTAAAAAACTTGCTCCACTTTTCTTTC
TTGTGTTTGTAAGAGCAATGGGGTCCTTGGTAAAAGTCATAGCCAGGAAC
ACAGACTTGTTCAGCTTTGGTCAACTTTGGTCCACAGGATAACAAAGTGA
AGCAAAGCTGAGTAAAAACTCTGAGGTAGGGAGAATCTTGGGCCACTCTA
AGTTATACGTCAGTTCTTCATTTTTTTTTTCAACCAAGATGGCAGTGTGT
CGATGAAGGTTAGACATCCAAGATAAAAAACTTCTTACTCTACTTTTCTT
GTGTGTGTTAGAGTGTTCGCCAGGTGCCCAGCCTTGTTCAGCTTTGGTCC
ACAGGATAACAAAGTGAAGCAAAGCAGAGTAAAAACTACCTAGGTGGGGA
GAATCTTGGGCCACTCCAAATCAATGCCTTGGTTCTACATTTGTTTTTGG
CAACCAAGATGGTAACTTGTGTCGATGAAGGTTAGACATCCAGGTAATAC
GATATGCCAAATAACAGTTACTCAAGCAACTGGATATGATTTTGGATGTG
ATTTTCCAAAATCATATCCAGTTGCTTGAGTAACTGTTATTTGGTGCAAG
ATGGTGGTGGTGGTGGGTGGCAAGGTAGGTTTGCGTAAGTTAAGTGACCA
AAAGTTCTTGTCCTTCCCTCACTCCCCCCAGACAGCTGGAGCAGATACGG
CGGATCCGCCCGTGCAGAAAACACCCAAGAAAAAGGTGCTTAGCAACCGA
CCAATCAGGACTCTGAGGTGTCGAATCATATGATTGGTGGAGGGGCTAAT
TTTTCTGCTTGGGGGTGTTATGTGCTTTTACCTTTTCCTTCCTGGTTTGG
TTTTCTGTTGATAGAACAGGTGCAGGTGGTGCATGGTGTGAGGCAAAAGG
TTTGTGGGAAATGTAATGAAAGGGTGATTTCTTTTAACCTTCTCCCTGCT
GAAGTTCCCGTTCGGAACAAATTTTGTATTGGTTACAGGGTAAGGTAGCA
GGGAGGAGGTTAAAAAGTTAACCCTGTTTGTTGTGCCCTTCCTACATAGA
TCCTGACCTCTAACCTCTGTGCCTCCTGCAGATCCTGACCTCTAGCTTCT
GGTCCTTCTGTGGATTCTGAACTCTAACCTCTGTACCTTCTGCAGATCCT
GACCTCTAACCTCTGTGCCCCTGCAGATCCTGACCTCTAACCTGCGGTGG
GTGGAGTTCATCTCCCATTGGCCGCTGTGGGCGATCTACTCGGCGCACTT
CGCCATGAACTGGAGTAACTACGTGGTCCTGTCGTGGCTCCCGACGTACC
TGCAGCGCGCGCTCGGAGCCAACGCCAACGACATCAGCTTCACCGCGTTT
CCCTACATGATGAACTCGCTCGTCGGCGTGGGTAAGTAGCTAACGACATC
AGCTTCACCGCGTTTCCCTACATGATGAACTCTCTCGTCGGCGTGGGTTA
GTAGACTTGCCTTGCACTGTTGTTCTGCCTTCTGCGTGTTGATACTTGAT
CAGTGACAGGCTTCAGTCTGAATAAACTTTATTAGTTCATTGATCTGCAA
CTGGAACTTTGACATAACTGAAGTTGAATACACTCATTTATGCCTCAGGA
TGAAATTTGCATGGGTATTTTATGACCAAATCCTATCAATGTATCTGTCC
CTAATGCAGCAGCTTGTACTAACTCTACATATAAAGCAGGTGCATTGTGT
CATGTGCTGGTATTACCCAGGCTAATTCTGGGTTCCAGTATCTTCTTTCT
AATAAAGGAATCTTTTATTTGGTTTTATCTGTTTTTTTATGTAATCCGTA
CCTCCTTACCCCCAGGTGCGGGCCACATGTCGGACTGGCTGGTGTCCCGT
AAGAACTGGACGGTTCTGTCCGTGCGGCGGCTGATGACGAGTATCGGGTT
ACTGGGGCCGGCCGTGTTCATCCTGGCATTCAGCACAACCAACAACCTCA
TCGTGGCACTGCTGTGAGTTTTTTTTTCTCTTCTGAATAACCGAAACAAC
CAACACTTCATATGTAAAACCTCATCTGAATGAACCATGTGTAGGAAATG
TAGGAGTTTTCAATGCATCTCAATTGATTCAGGCCATAACTATGTCATGT
TTTTCCTGGTCCTCTGTACCACCATTTTGTTGACCTTGACCTGTACCCTT
TGCCCCCTACCCCAGGCTGGTGTCGGTGTCCATGGGTCTGTGTGCGTGCA
ACTCCTCGGGTCACATGAGTAACCATGCCGACGTAGCGCCCAACCACGCC
GGGATCACCTTCGCTGTTTCCAACACCATGGTAGGTCAACCCCCCCACAC
ACTCACATACAAGCACGCACTCACACGCACACACACACACACATACGCAC
TCACATGCACACACAACCATGCCGGGATCACCTTCGCGGTCTCCAACACT
ATGGTAGGTCCAACACACATACACATACATACTCCCAACCACGCTGGGAG
CACCTTCGCGGTCTCAAACACTATGGTAGGTCAAACACAAACACACATAC
CCATGTATGCATGCACCCACACCCAACCACGCCGGGATCACCTTCGCTGT
CTCCAACACTATGGTAGGTCCAACACACATGCACATGAACATGCATGCAT
GCACGCACGCATACACCCACACCCACACCAGGATTGCATTTGCTGTCTCA
AACACTATGATACAACTGGGGTTCTTTTATCTTATGATCTTCAGCACAAA
CTGACTTATGTTCACAAAGCATACAAGATCAACATGTATTTACACATACA
ACAAATAAAAGAAGAGTCATGTGCCAGTCTAACAGACGTTTCTTATTCCA
CACACACAGGCACATAAAGATTCTCAGTTCTGCAATATTTTGAGGGCTAG
TATTGCAGGCATCCCACACAGCCCTGTTAAGCCATGCTTTGGCAACACAA
CACCATGTACAAGATCAATCCTTAACCCTGCTGTCCCCCTCCCCCTTGTA
GGCTAGTATCCCAGGCATCGCCCACGGGCCCGTCACAGCGACCCTGGTGA
CGGCCACAGGACACTGGTACCCGGTCTTCATGGTGGCAGCTGGAGTCAAC
ATGGTGGGGGCGATGGTCTATGCCTCACAGAGCTCCGCTAGCCAGGTGCT
CTAGCACATGTACACCTGCTGTACACACCTGTGTCACCTGCCAGGTGCTC
TAGCACACCTGTAGCTCCTGGTTGGTCCATCGTACAGGTGTACCAGGCAG
GTACTCTGAAAACTGTCAATGTTCATCATGTACAGCTGCTCACCTTTCCA
GGTGCTTTCATGTAGCTGTAGATAACTTTAGGTTTTGAAAAATACACCTG
TAGCACCTGTACAGCTGCAAGACAACAGTCAGCCAGGTGCTCTGAAAACT
TCAGCTGTTCACCATGCACAGCTGCTTTTTTGTCCAGGTGCTACTGTGTA
GCTGTATGGAACACTGGCATCTTTGTGTTGGGAAAGCTCTGACTAGAATA
TGTTTTAATCTTACTCTT Coding sequence (CDS) from alignment at xpSc0039671:235980..241597+ >Blg03446.1 ID=Blg03446.1|Name=Blg03446.1|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at xpSc0039671:235980..241597+ (Branchiostoma lanceolatum)
ATGAATTCCAAACTTCCCAAGAGTTTCCGGACTGTGATTCTGTGCTCGTT
AGCGAACTTCGTTAACCAGGCGGACCGTACCATCATGCCGATCGCGCTCG
TGCCGATGAGCAACGAGTTTGACTGGAACCTGCAGGCTCAGGGCTGGATA
CTGAGCTCATTCGCCTTCGGATACATCAGTAGTCAGGTTATCGGCGGAAG
TGCAGCCCGGCGGTGGGGAGGCAAGTGGGTTCTGGGATTCGCCGTCGCCG
TGTGGTCCCTGGCGACCTTCTTCACGCCGACCTTCGCGCGGACGCTCTAC
GGTCTGATCTTCGCCCGGATCTGCCTGGGGTTCGCGGAGGGGCTCGGGCT
GCCGACGATTTTCCACATCTTCGCAAACACGGTTCCGATGGAGGAGCGGT
CGCGGGCGTTCGGCTACCTGGTGGCGTCCGGGTCTATCGGACAGACGCTC
GCTTCTGTGGTGTGCCCCAGACTGCAGTGGCCCATGATGTTCTACAGTTT
CGGGGTTCTGGGGTTCGTGTGGGTCGCCACATGGGTTCTCTGCTTCAGGG
AGCAGTCCATCGACTACGATGAAGAACTCTTCCTTCCGCCCAAGATCCTG
ACCTCTAACCTGCGGTGGGTGGAGTTCATCTCCCATTGGCCGCTGTGGGC
GATCTACTCGGCGCACTTCGCCATGAACTGGAGTAACTACGTGGTCCTGT
CGTGGCTCCCGACGTACCTGCAGCGCGCGCTCGGAGCCAACGCCAACGAC
ATCAGCTTCACCGCGTTTCCCTACATGATGAACTCTCTCGTCGGCGTGGG
TGCGGGCCACATGTCGGACTGGCTGGTGTCCCGTAAGAACTGGACGGTTC
TGTCCGTGCGGCGGCTGATGACGAGTATCGGGTTACTGGGGCCGGCCGTG
TTCATCCTGGCATTCAGCACAACCAACAACCTCATCGTGGCACTGCTGCT
GGTGTCGGTGTCCATGGGTCTGTGTGCGTGCAACTCCTCGGGTCACATGA
GTAACCATGCCGACGTAGCGCCCAACCACGCCGGGATCACCTTCGCTGTT
TCCAACACCATGGCTAGTATCCCAGGCATCGCCCACGGGCCCGTCACAGC
GACCCTGGTGACGGCCACAGGACACTGGTACCCGGTCTTCATGGTGGCAG
CTGGAGTCAACATGGTGGGGGCGATGGTCTATGCCTCACAGAGCTCCGCT
AGCCAGGTGCTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03446.1-exon-xpSc0039671-1570713199:235980..236389 | Blg03446.1-exon-xpSc0039671-1570713199:235980..236389 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:237180..237452 | Blg03446.1-exon-xpSc0039671-1570713199:237180..237452 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:238018..238152 | Blg03446.1-exon-xpSc0039671-1570713199:238018..238152 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:239306..239461 | Blg03446.1-exon-xpSc0039671-1570713199:239306..239461 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:239527..239575 | Blg03446.1-exon-xpSc0039671-1570713199:239527..239575 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:239945..240092 | Blg03446.1-exon-xpSc0039671-1570713199:239945..240092 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:240295..240409 | Blg03446.1-exon-xpSc0039671-1570713199:240295..240409 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:241081..241325 | Blg03446.1-exon-xpSc0039671-1570713199:241081..241325 | Branchiostoma lanceolatum | exon |
| Blg03446.1-exon-xpSc0039671-1570713199:241462..241597 | Blg03446.1-exon-xpSc0039671-1570713199:241462..241597 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039671 | genome | xpSc0039671:235980..241597 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03446 |
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