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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL07943_evm0 >transcript:BL07943_evm0-protein ID=transcript:BL07943_evm0-protein|Name=transcript:BL07943_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=305bp
MQWMVTTSNAISNSATPAAFTNAVNVASSPEIKVLLDSAARRRRRVPDHE
LPFDEREKRRVRRERNKQAAAKCRNRRRDLTEELIAQTEDLEEEKAGLEA
EIASLMAQKEQLNFILQAHKPACKKIRTDSDSDSTITPSGSPGRKSVSPK
PANLTLPLTAITTSPSLNTPSITTCALTTPTLTTPNMVTTLESFMSSLDT
PTIVTASSDFDTFTTSATLTTPTIPNMDGVFAEPNPFTMATTPFTMAITP
SSMTTTLFNYPHVTETLDLPFPTSGQACAQQVQRSSSGSASDSTPEATSP
RWISL Run BLAST on NCBI mRNA from alignment at Sc0000279:9789..12676+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL07943_evm0 ID=transcript:BL07943_evm0|Name=transcript:BL07943_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2888bp|location=Sequence derived from alignment at Sc0000279:9789..12676+ (Branchiostoma lanceolatum)
CGACTGTCAGAACTTTCACCTAGGTACATGTATAATGTTACAACTATTAT
GATGTAGAGGAAGGGGAGGGGCTCTTCTTGTTGTCACTGAACTTTTCCAG
GCCAGGGATACATGAGACAGGATATGTCATAGACAACAGTATGTAGGTGT
GTGTACACACATATATAAGCAAGGCTAACAACCTTTCCTCTCATTTCAAC
AGGACTTTGCTGGATCTGGGAACGAGTTTACATCCAACCTGAACACACTG
GCCAACGCTGCGTCAGACCCAACCATGCAGTGGATGGTCACCACCTCCAA
TGCCATCTCCAATTCTGCCACTCCTGCGGCTTTCACTAACGCAGTCAACG
TGGCAAGCAGCCCAGAGATCAAAGTGTTGCTGGATTCCGCAGCACGCCGC
CGTAGACGCGTCCCAGATCATGAGGTGGGTTGATTACCTTTAAAACACAA
AGTTATGTGTTACAACCACTTACAGTTTAAGGCATAGAGTAGCAAGTCTA
GGTTTCTAATACGACATTGAAAAAAATGACAACAAAAGCTGTCCATTTTC
AAGTGTTCAACAGAACTGTCCAGCAAGGAGGTTTTATATAAATTCTCCTT
GTGTCCAGCAATACTCCCCAAAGAACATCGGAAGTATGAAACTTCCATAC
TATAGAATTCCACTCATCAATTCAAAACCGTATGTCAACGACCTCCTGTA
AGGTCACTCACCCAAATTCCATTTCCTGTGTGTCAAAATTGACTTCCTGT
TGATGTGGGGCATTTGAATTGAATCTGGCAGATTTTGACCCCCATTGGGG
ACAGAGAAGCAACCCCCTCCCCACCCACCACTTCCTGTGCCAGGTCAGCT
GAGGGAACCACAGGGGGGTGTAATTGTACATATCACAACAGACAAATAGC
CTGGTACAGGAAGTCCCTGCTTATTGTGTCAATACCTGATGGCTTAAAGA
ATTTCCTGGGACTTGACTAAAACTGATCTTATGACAGATAGAAACTCATA
CCTTTTTCTTGATTGTCTGTTCCATCAACTGAGAATATGTCACTAAATTG
TTTTTCCTCACTTTGCAGCTGCCATTTGATGAGCGTGAGAAGCGCCGTGT
GCGACGTGAGAGGAACAAGCAGGCTGCAGCAAAATGCCGTAACCGCCGCC
GTGACCTTACCGAAGAGCTGATCGCACAAACTGAAGACCTGGAGGAGGAG
AAGGCCGGGCTGGAGGCTGAGATTGCGAGTCTGATGGCTCAGAAGGAGCA
GTTAAATTTCATCCTCCAGGCACACAAGCCTGCCTGCAAGAAGATACGCA
CAGACTCCGACTCTGACAGCACAATCACCCCCTCCGGCAGCCCTGGCCGC
AAGTCCGTCTCCCCCAAACCTGCTAACCTGACCCTCCCCCTGACTGCCAT
CACCACCTCCCCCAGTCTCAACACCCCCAGCATCACCACCTGCGCCCTGA
CCACGCCCACGCTCACCACGCCCAACATGGTCACCACTCTAGAGTCCTTC
ATGTCGTCCCTGGACACGCCCACCATTGTGACGGCTTCCAGTGACTTTGA
CACCTTCACCACGTCAGCAACTCTGACCACGCCCACCATCCCAAACATGG
ATGGAGTGTTCGCGGAGCCCAACCCCTTCACCATGGCAACAACGCCCTTC
ACCATGGCAATAACGCCCTCCTCCATGACAACCACCCTCTTCAACTATCC
CCATGTGACGGAGACGTTGGACCTTCCCTTCCCCACCTCGGGACAGGCCT
GTGCCCAGCAGGTCCAACGGTCCAGCTCAGGTTCTGCCAGCGACAGCACG
CCTGAGGCTACCTCACCGAGATGGATTTCTTTGTGATTATCCAGCACTTA
AAGACTTAAAAAGACATAGTAATACTGTTGTTGGAATATTCTTACTATAA
GCAGTGTTCAAAGTATTAAATTGTATGTATAAAGACCTACTATTTGTTTT
TTAAGGATTTTGTAAGAGAATTTCAGGTGTAAAATGAAAATTGGAGGGCC
AACAGGCATGGCCAACAAAATAGAGTTGTAAGCGTCGTATGGTAGCAATT
CTGCGGATACTGCCAGGTGTGCAGAGGGAAGGAGTGTGCCGGTAACATGG
AACTTCTCAGGGTGCAGGGCTGGACTGCAGGGCAGTATTGTACTGTGGTG
ACTCAGAGATGGCTCCCTAGTCCACAGCCAAGTGGATTAACCATGGCCAT
TCTTAATTGTCAGAAGGACTTGCCTCATGCCCTACTTTCACAGCGAGTCA
CTTTCTCTTTTTGGGTTTGGTGCAATACCATACATGGACATTTTAGAGCT
TCTTTAATGATGAATCATAAGTGAACCAGAAACAAAGTGTGATTCAGGAC
TTTTATTGCCTGGCATTGTTTCTATGTCCTACAATGAGCAGTCAGTGTAC
ATATAATATGTGGTATGACTCATACATACCAATTAGATATTTATTGCTTT
TATGATGAAGTGGAGGAATCTGACATATAGACAAGTGATTGACTTTTTAT
TATGCAAAACAGATTTATTTATTTTCATGAGACTTGTTAACTTATTCAAT
TATGTATGAAGGTACTGCCATCGATATTTATACCTAAATATTATGTCATC
TAGCATGTGACCTTGTTATTTATTCTGGCATTTTGTCTATGCAGAGTGTT
ATATTTTGATAAAATAAAAAGTGGACTGAAAACTCTTGGTGTTTCTGCTT
TTCTTAATCAGTTTAAGCTGGGATAGGGGGACAGGGATATTTGTCAACCT
GCCATTACTTTAAAACAGAACAGATTAAGATAATATATCCACACACAAGA
TTCAGGACAATTCTAGTGGACATCACAGTATCTTTGAGAAAAATTCGTTG
GCTTGACACTGGCATGATTATGTATGACATGCCTTGGC Coding sequence (CDS) from alignment at Sc0000279:9789..12676+ >transcript:BL07943_evm0 ID=transcript:BL07943_evm0|Name=transcript:BL07943_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=918bp|location=Sequence derived from alignment at Sc0000279:9789..12676+ (Branchiostoma lanceolatum)
ATGCAGTGGATGGTCACCACCTCCAATGCCATCTCCAATTCTGCCACTCC
TGCGGCTTTCACTAACGCAGTCAACGTGGCAAGCAGCCCAGAGATCAAAG
TGTTGCTGGATTCCGCAGCACGCCGCCGTAGACGCGTCCCAGATCATGAG
CTGCCATTTGATGAGCGTGAGAAGCGCCGTGTGCGACGTGAGAGGAACAA
GCAGGCTGCAGCAAAATGCCGTAACCGCCGCCGTGACCTTACCGAAGAGC
TGATCGCACAAACTGAAGACCTGGAGGAGGAGAAGGCCGGGCTGGAGGCT
GAGATTGCGAGTCTGATGGCTCAGAAGGAGCAGTTAAATTTCATCCTCCA
GGCACACAAGCCTGCCTGCAAGAAGATACGCACAGACTCCGACTCTGACA
GCACAATCACCCCCTCCGGCAGCCCTGGCCGCAAGTCCGTCTCCCCCAAA
CCTGCTAACCTGACCCTCCCCCTGACTGCCATCACCACCTCCCCCAGTCT
CAACACCCCCAGCATCACCACCTGCGCCCTGACCACGCCCACGCTCACCA
CGCCCAACATGGTCACCACTCTAGAGTCCTTCATGTCGTCCCTGGACACG
CCCACCATTGTGACGGCTTCCAGTGACTTTGACACCTTCACCACGTCAGC
AACTCTGACCACGCCCACCATCCCAAACATGGATGGAGTGTTCGCGGAGC
CCAACCCCTTCACCATGGCAACAACGCCCTTCACCATGGCAATAACGCCC
TCCTCCATGACAACCACCCTCTTCAACTATCCCCATGTGACGGAGACGTT
GGACCTTCCCTTCCCCACCTCGGGACAGGCCTGTGCCCAGCAGGTCCAAC
GGTCCAGCTCAGGTTCTGCCAGCGACAGCACGCCTGAGGCTACCTCACCG
AGATGGATTTCTTTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000279 | genome | Sc0000279:9789..12676 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL07943_evm0 |
| Biotype | protein_coding |
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