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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL60781_cuf1 >transcript:BL60781_cuf1-protein ID=transcript:BL60781_cuf1-protein|Name=transcript:BL60781_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=200bp
MLFGRLRDCYTLYPESGFSQLFSVESAKRNPHTTNMAEEHIRPLQCVQEV
QQAFRLDLASFPHADDEDLPIETWMTVYNEERSLLLGYFKSEELLGLIGA
SMSDADHYTKEALRTHVSHGETICINSLCVDQNVQRQGIATRLLHKFVLN
VKGSFPKAKRICLICPEYLIPFYTKAGFVLVGLSEVVIGKQPVFECTMEL Run BLAST on NCBI mRNA from alignment at xfSc0001587:1..2789- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL60781_cuf1 ID=transcript:BL60781_cuf1|Name=transcript:BL60781_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2789bp|location=Sequence derived from alignment at xfSc0001587:1..2789- (Branchiostoma lanceolatum)
GGTCAGCAAACAATATGCATGTTATAATTAATGTGGGAAGAAACACCAAC
CATTTCCCATCGAGAGCACTGGAGAGGAAGGAAAACCGTCTTCTCTGAAC
AGCAGCCCAGAACAAAAATGGACTGGGGTCGAGAAGTGCCTTCCCGGCAT
AGGATAGGACATTTGCGTACTTTGGGGGTTCAATCTGTCGACCGTCTCTA
GGATCTTCAGGACAGAAAGCCGCGAGGGGAACCCCTGCACACTACAAACA
TGTCAGAAAAGACCATAAGATGATAAGACCGTTGCAGTGTGTCCAAGAGG
TTCAACAGGCTTCCCGTCTGGAATATGCATGTTTTCCTGCAGATGAAGCT
GAACCACTGGAGACCTGGATGAAGAGATACAGTGAGGAAAGAAGTCTTGT
CCTTGGATACTTTAAGAACAAAAAGCTCTTAGGTTTCATCGGTGCCTCAC
TGAGCGATGTTGATCACTACACGGAGGAAGCCATGCGCACCCATATACCC
CATGGTGAAACTATCTGCGTCCATTCTGTCTGTGTTGACCTAAATTCACA
GCGCCAGGGAATAGCAACGAAACTACTCCATGAGTTCGTTCTACATGTGA
AAGAAAGTTTCCCCGGGGCTAAGAGAATATGTCTGATATGTCCCGAGTAT
CTGATCCCTTTGTATGCCAAGGCAGGATTTGTTCTGGTCGGGAAGTCTGA
AGTTGTGCACGGCAAAGAAGCTTGGTATGAATGTACACTGGAGTTGTGAT
TATGCTTGTACTTGGAAACTTAATTATTGGTTCTTAACAGAGTGGTCAGT
TGATTCAAATATCGTAAAATACAGACTCTGGTAAATTAGGTCACACATTG
GAAACGTCATGCGCATGCGGGTCGATTGAAAGAAGGAAAACCTGTTTGTC
TTCTCTGAGCGACAAAGAATTCAACAGCTTGAAAAGTACCAAGATAGTGA
AAGGTGAGGATTTATTTTTTTCTGCCAACAACGCATTTAATGACCAGTTA
TTAACCAACCGTTACAGAACAATGTTGCTCTAGACACAAATGGGTGCACC
GCATAGCCACCATGTTTTTTACTACAAATGAAGGCTTGTTGGAAGATCAT
CCGGCGTATTTGAGTGACGTCTAGTGTTATGCGATTTGGAAGCTTACTTA
TACTGAGTTGGTTCTAAACAGAGCAGTCAGTTGATTTAAATGTGGTGAAT
GGTACAATGCAGTGGTCAATTAGATAAGTGGTAACTCCGTGCGTTTGTTG
ACATTTGCCAGCAAACCCGAAAATTATAAGGCAATGTTACAAACGAGAAA
TCCAATGTGTCATCACATAGTTGTGACTTCGTGAAATATTTCAGTTACAC
GCTTTATCCAGTGTCAGCCATCCCGCCACTCTTCAGATTCGAAAAAAAAA
ACGTCGAGAGAAACCCGCACGTACTACAGACATGGCAGCTGAACGGCACA
TTAAGACCGCTGCAGTGTGTCCAAGGGGTTGAGCAAGCTTTCGGACTAGA
TTCTGCACAAGTTTTCCAGCAGATTTACCACTTGAGACCTTGAATTGGCC
TTCAGGTCCTGTGACGTGGTGGCCACTAAACATTGTCTATAAGTGGTCTC
CTGACCTCGCACTGAGCAAACACCAAAAATTGGTGCACCACACAACCACC
CTGTTTTCTGACTACAGAAGTAGACCTGCGGGATATGCTATTTGGAAGAT
TACGTGATTGGTGCTCAATTTGTTGACAATTGTAGCTGCTAACGGCAAGA
GAAATTAGAACGCGTTTTGCAAACGAAAATGTGTATTTTGTTACTTTCAG
TGTAGGACTCTGTTAACAAATACCTTGTTAAACATTTCAGTTACACGCTT
TATCCAGAGTCAGGCTTCTCACAGCTCTTCAGCGTAGAAAGCGCCAAGAG
GAACCCTCACACTACAAACATGGCAGAAGAGCACATAAGACCGTTGCAAT
GTGTCCAAGAAGTTCAACAAGCCTTCAGACTGGACTTGGCAAGTTTTCCC
CATGCAGATGATGAAGATTTACCAATTGAGACCTGGATGACGGTTTACAA
CGAAGAAAGAAGTCTTTTGCTTGGATACTTTAAGAGTGAAGAGCTCTTAG
GTCTCATCGGTGCATCAATGAGCGATGCTGATCATTACACGAAGGAAGCT
TTGCGCACCCATGTATCTCATGGTGAAACTATATGCATAAATTCTCTTTG
CGTTGATCAGAATGTACAGCGCCAGGGAATAGCAACAAGACTACTCCATA
AGTTCGTTCTCAATGTGAAAGGAAGTTTTCCCAAGGCTAAGAGAATATGT
CTGATATGTCCCGAGTATCTGATCCCTTTTTATACCAAGGCAGGATTTGT
TCTGGTCGGACTGTCTGAAGTTGTGATTGGTAAACAACCAGTCTTTGAAT
GTACGATGGAGTTATGATTCTGCTTGTACTTGACGCCCGTGTCACACATT
CAGTCTTTAGCACTAGTGCTTGTCAGAGTTGTAGTTAGTATGGATTTTTT
TTGCTAGCTGTAAGTATTTCCCGACAGTTCAAGTGACCACGCAAAGCAAA
CGTAAGCTCACACAGACACTGTCCATATGTCCAGATGTGATTGAAAATAA
ACGTCACTTTATCAAGAATCTTCCAAAATATAGTGATAAACACTCAGAGT
TATTCATCTTTCTTTTCACGTGCTCAAAGGATTGTATAATTGATGATCAA
TTTTATAGATAAATTCAATCATGTGTTACGATTAGACTATTGTTACAGTG
TACAAAGGACAACTACATTTAAGAATATCTAGATCGTAG Coding sequence (CDS) from alignment at xfSc0001587:1..2789- >transcript:BL60781_cuf1 ID=transcript:BL60781_cuf1|Name=transcript:BL60781_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1206bp|location=Sequence derived from alignment at xfSc0001587:1..2789- (Branchiostoma lanceolatum)
ATGCTATTTGGAAGATTACGTGATTGTTACACGCTTTATCCAGAGTCAGG
CTTCTCACAGCTCTTCAGCGTAGAAAGCGCCAAGAGGAACCCTCACACTA
CAAACATGGCAGAAGAGCACATAAGACCGTTGCAATGTGTCCAAGAAGTT
CAACAAGCCTTCAGACTGGACTTGGCAAGTTTTCCCCATGCAGATGATGA
AGATTTACCAATTGAGACCTGGATGACGGTTTACAACGAAGAAAGAAGTC
TTTTGCTTGGATACTTTAAGAGTGAAGAGCTCTTAGGTCTCATCGGTGCA
TCAATGAGCGATGCTGATCATTACACGAAGGAAGCTTTGCGCACCCATGT
ATCTCATGGTGAAACTATATGCATAAATTCTCTTTGCGTTGATCAGAATG
TACAGCGCCAGGGAATAGCAACAAGACTACTCCATAAGTTCGTTCTCAAT
GTGAAAGGAAGTTTTCCCAAGGCTAAGAGAATATGTCTGATATGTCCCGA
GTATCTGATCCCTTTTTATACCAAGGCAGGATTTGTTCTGGTCGGACTGT
CTGAAGTTGTGATTGGTAAACAACCAGTCTTTGAATGTACGATGGAGTTA
TGAATGCTATTTGGAAGATTACGTGATTGTTACACGCTTTATCCAGAGTC
AGGCTTCTCACAGCTCTTCAGCGTAGAAAGCGCCAAGAGGAACCCTCACA
CTACAAACATGGCAGAAGAGCACATAAGACCGTTGCAATGTGTCCAAGAA
GTTCAACAAGCCTTCAGACTGGACTTGGCAAGTTTTCCCCATGCAGATGA
TGAAGATTTACCAATTGAGACCTGGATGACGGTTTACAACGAAGAAAGAA
GTCTTTTGCTTGGATACTTTAAGAGTGAAGAGCTCTTAGGTCTCATCGGT
GCATCAATGAGCGATGCTGATCATTACACGAAGGAAGCTTTGCGCACCCA
TGTATCTCATGGTGAAACTATATGCATAAATTCTCTTTGCGTTGATCAGA
ATGTACAGCGCCAGGGAATAGCAACAAGACTACTCCATAAGTTCGTTCTC
AATGTGAAAGGAAGTTTTCCCAAGGCTAAGAGAATATGTCTGATATGTCC
CGAGTATCTGATCCCTTTTTATACCAAGGCAGGATTTGTTCTGGTCGGAC
TGTCTGAAGTTGTGATTGGTAAACAACCAGTCTTTGAATGTACGATGGAG
TTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0001587 | genome | xfSc0001587:1..2789 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL60781_cuf1 |
| Biotype | protein_coding |
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