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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL62484_cuf0 >transcript:BL62484_cuf0-protein ID=transcript:BL62484_cuf0-protein|Name=transcript:BL62484_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=252bp
MKDILAKCLAGRENDWDRILPHVALAYNTSLHTTTKRSPFYLVHGREARL
PVDVACRLPATTAHLADLTTAITSVRDAIAQSHQTQDQQQAPRVNYHQYR
VGDRVWLHHPPSALYKLRLPWTGPFTVMATLPPGEPAPILYRIQHDTGRQ
RQQVVHHNRLKPYVAPTRRLLPAPPAAAPDNRRRLPDAGHLGFAGFLQQH
HLRPPDLPAAQPDPPPPAPVPVQLPAVPAPAVRTRSGRISRPPTLFMDLD
YN Run BLAST on NCBI mRNA from alignment at Sc0000108:366698..368085+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL62484_cuf0 ID=transcript:BL62484_cuf0|Name=transcript:BL62484_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1388bp|location=Sequence derived from alignment at Sc0000108:366698..368085+ (Branchiostoma lanceolatum)
GATGAAAGACATACTCGCGAAGTGTTTAGCAGGGCGCGAGAACGACTGGG
ACAGAATACTACCCCACGTCGCCCTGGCCTACAACACCAGCCTCCACACC
ACCACCAAGCGCTCTCCATTCTACCTTGTCCACGGCCGAGAAGCCCGCCT
CCCAGTGGACGTCGCCTGTCGGCTACCTGCCACGACAGCTCACCTGGCTG
ACCTGACGACAGCCATCACGTCAGTCCGCGACGCCATCGCCCAGTCCCAT
CAGACGCAAGACCAACAACAAGCCCCCCGTGTCAACTACCACCAGTACAG
AGTCGGCGATCGCGTCTGGCTTCACCATCCACCTTCCGCACTGTACAAAC
TACGCCTGCCTTGGACTGGACCGTTCACGGTCATGGCCACACTACCACCC
GGTGAGCCAGCGCCCATCCTGTATCGTATACAACATGACACCGGTCGCCA
GCGCCAACAAGTAGTCCATCACAACAGACTAAAGCCGTACGTCGCTCCTA
CCCGCCGACTCCTGCCAGCACCACCCGCTGCCGCACCCGACAACAGACGT
CGTCTACCCGACGCGGGACACCTTGGCTTCGCAGGCTTCCTGCAGCAACA
TCACCTCCGCCCACCTGATCTACCTGCCGCCCAGCCCGACCCTCCACCTC
CCGCTCCCGTTCCTGTCCAGCTGCCAGCCGTTCCCGCACCAGCCGTCAGA
ACGCGATCCGGCCGCATCAGCAGACCCCCTACCCTCTTTATGGACTTGGA
CTATAATTAATGAACTCAATTCCGCCAAAAGACACTAGATTTCTCAAATG
CATAATGATCGGACGGCACATGAATTGTATGGCCATTTGTACCCTACCAT
TTTCTTTTATTATTTGTATTTTTGTTGCTTCCATGTAAGAAACTTGTAAT
ATTGAGCTTGTACCGCCATTGCCATGTTGTGTTCATGACGGACACTACTT
CTGTATACATGTGTTAGTGTATGGAATGTACGATATTGTAGTTTTTTACT
ACCGCTCTTGTAATAGCGACCTTATTCTTGTGCATTGTTTGTTAGATGCC
TATTGTTTATTTTCCATGTATTTTGTGCCCACGTGTGACCTCCCATTGCG
TACTACGTTAGCCTTGCCCGGTTGTTATTGTTATTGTTGCTCTTTCGTTC
AGCCAACCCGTGGCTATCGCCTCCGCCGGCTCCCTGTAATTAAACTGTGG
AGTCGGGACGCCTCCAGATTAGGGGAGGGCCAGTGTAGTATTCACCAAAT
ATGGGGGGATGACACAATTGACATCTGGGACGAGTTAGGGCACTGTCCCT
GATTAATAAACCTCCGGCCATGCGGCCCGGAGTCAGTCTGAAGTCCATCT
ACGTGTGTGCGGCTGTCCCTCTCTTAGCCTTGTTATCA Coding sequence (CDS) from alignment at Sc0000108:366698..368085+ >transcript:BL62484_cuf0 ID=transcript:BL62484_cuf0|Name=transcript:BL62484_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=759bp|location=Sequence derived from alignment at Sc0000108:366698..368085+ (Branchiostoma lanceolatum)
ATGAAAGACATACTCGCGAAGTGTTTAGCAGGGCGCGAGAACGACTGGGA
CAGAATACTACCCCACGTCGCCCTGGCCTACAACACCAGCCTCCACACCA
CCACCAAGCGCTCTCCATTCTACCTTGTCCACGGCCGAGAAGCCCGCCTC
CCAGTGGACGTCGCCTGTCGGCTACCTGCCACGACAGCTCACCTGGCTGA
CCTGACGACAGCCATCACGTCAGTCCGCGACGCCATCGCCCAGTCCCATC
AGACGCAAGACCAACAACAAGCCCCCCGTGTCAACTACCACCAGTACAGA
GTCGGCGATCGCGTCTGGCTTCACCATCCACCTTCCGCACTGTACAAACT
ACGCCTGCCTTGGACTGGACCGTTCACGGTCATGGCCACACTACCACCCG
GTGAGCCAGCGCCCATCCTGTATCGTATACAACATGACACCGGTCGCCAG
CGCCAACAAGTAGTCCATCACAACAGACTAAAGCCGTACGTCGCTCCTAC
CCGCCGACTCCTGCCAGCACCACCCGCTGCCGCACCCGACAACAGACGTC
GTCTACCCGACGCGGGACACCTTGGCTTCGCAGGCTTCCTGCAGCAACAT
CACCTCCGCCCACCTGATCTACCTGCCGCCCAGCCCGACCCTCCACCTCC
CGCTCCCGTTCCTGTCCAGCTGCCAGCCGTTCCCGCACCAGCCGTCAGAA
CGCGATCCGGCCGCATCAGCAGACCCCCTACCCTCTTTATGGACTTGGAC
TATAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000108 | genome | Sc0000108:366698..368085 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL62484_cuf0 |
| Biotype | protein_coding |
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