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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL64812_cuf0 >transcript:BL64812_cuf0-protein ID=transcript:BL64812_cuf0-protein|Name=transcript:BL64812_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=151bp
EVTVRQPDLETASSDVQLTVVDYQIVGYIKGIVLASGTQVTLSATVSGSN
TPCQNSWTLNGNQPLNNAVSEDRWKGPDEHWTVISTFTFQSDSTVTVAFS
SYIPPPVNATDNDTHANSRTVVVQMPIIFEGKLQYVLMEYVIEAIICMIY
A Run BLAST on NCBI mRNA from alignment at xfSc0003083:476..1960- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL64812_cuf0 ID=transcript:BL64812_cuf0|Name=transcript:BL64812_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1485bp|location=Sequence derived from alignment at xfSc0003083:476..1960- (Branchiostoma lanceolatum)
TGAGGTAACAGTACGTCAGCCTGACCTGGAGACGGCCTCCTCAGATGTGC
AACTGACAGTTGTTGGTAAGAAATCATCCGACAATATGTAACCATCATGA
CCCCTTGAAATTGATATTGTCCATAAAGTCATCGACTTGATATCTTGTAC
TAGTATCTAGTTCTCGGTTTTTCGAAGAACAATAATGACAGGGCGGTAGA
AAAAAAAGGAAACATATACATCCTGTGATAGACCAAAATGAAAACACAGG
ATAGCATCAGAATTAACATAACAAGCTGGCGTTTCAAAAAATAACATCGT
AATTCCCAACTTGTAATGAATTGATAAATAGAAAAACTGTAGCAACTTTT
CCATCTTTACTTTTTCAAAACCCTTTTGAAACAGCAGACGAGAGAACCAA
AACATTAAGCTGTTTTGGACAATTGGCTCACTCCGACTCACTCACTCACA
CTAGTAGCTATGTTCCTATATATTATCAGAATCGCACATGTCAAGTAATG
TAACATCACTTAAAGCCAGGTAGCTGAAACTATAAAACGTCTGCTGTTTC
CAAAATCATATCCAGTTGCTTACTGTTATTTGGCGTATCTTATTACCTGG
ATGTCTAACTTTCGTCGACCGTAGGTAGTCTGTATAACGCAAACTCCAGC
TGTCCTAGGAGGCTTGATTGAATTCAGGCTAGACCGTAGGTAGCTAAATT
GTTTCAGTTGATACGATTTTTTCTTACTATACATGTAGCATATTGATATG
ACAATATATGTACCGAGCGGTCTGTAAATGAAGACAAAACATCCGAGCTA
TTAGAACAATTGTCCAGCACCAAACAATGCATTTTGCATTCATTGCAGAC
TATCAAATCGTGGGCTACATCAAGGGAATCGTGTTGGCAAGCGGCACACA
AGTGACTCTCTCGGCCACAGTCTCCGGCAGCAACACCCCCTGTCAGAACT
CCTGGACACTGAATGGAAACCAGCCACTCAACAATGCAGTCTCTGAGGAT
AGATGGAAGGGCCCTGATGAGCACTGGACCGTCATCAGTACCTTCACATT
CCAGAGTGACAGCACCGTGACGGTGGCTTTCAGTTCGTACATCCCGCCAC
CTGTCAATGCAACTGACAATGACACGCATGCAAACTCACGCACTGTGGTG
GTCCAAATGCCGATTATCTTTGAGGGTAAGTTACAATATGTTCTCATGGA
ATATGTAATTGAGGCCATTATTTGTATGATATATGCCTAATGAAGTTAAC
ATAACGTCCCAATTCCGCAAGTTTGAAATATCCGTCATTTTGTACTATTT
TGTTATCTAGCATTTTTTTTACATTTAGTATGATGCATTTCATTTCTTTT
ATATATACATACATATATCTTCATGGACAGTTTCAAATGTTTGGCAGTCA
GGAAATATATTCAACAAATCCTTCGGTTTACATAATATAATTTATATACA
AAAATGAACAAGACGTGCCCAGCCTTGTATTATCT Coding sequence (CDS) from alignment at xfSc0003083:476..1960- >transcript:BL64812_cuf0 ID=transcript:BL64812_cuf0|Name=transcript:BL64812_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=912bp|location=Sequence derived from alignment at xfSc0003083:476..1960- (Branchiostoma lanceolatum)
GAGGTAACAGTACGTCAGCCTGACCTGGAGACGGCCTCCTCAGATGTGCA
ACTGACAGTTGTTGACTATCAAATCGTGGGCTACATCAAGGGAATCGTGT
TGGCAAGCGGCACACAAGTGACTCTCTCGGCCACAGTCTCCGGCAGCAAC
ACCCCCTGTCAGAACTCCTGGACACTGAATGGAAACCAGCCACTCAACAA
TGCAGTCTCTGAGGATAGATGGAAGGGCCCTGATGAGCACTGGACCGTCA
TCAGTACCTTCACATTCCAGAGTGACAGCACCGTGACGGTGGCTTTCAGT
TCGTACATCCCGCCACCTGTCAATGCAACTGACAATGACACGCATGCAAA
CTCACGCACTGTGGTGGTCCAAATGCCGATTATCTTTGAGGGTAAGTTAC
AATATGTTCTCATGGAATATGTAATTGAGGCCATTATTTGTATGATATAT
GCCTAAGAGGTAACAGTACGTCAGCCTGACCTGGAGACGGCCTCCTCAGA
TGTGCAACTGACAGTTGTTGACTATCAAATCGTGGGCTACATCAAGGGAA
TCGTGTTGGCAAGCGGCACACAAGTGACTCTCTCGGCCACAGTCTCCGGC
AGCAACACCCCCTGTCAGAACTCCTGGACACTGAATGGAAACCAGCCACT
CAACAATGCAGTCTCTGAGGATAGATGGAAGGGCCCTGATGAGCACTGGA
CCGTCATCAGTACCTTCACATTCCAGAGTGACAGCACCGTGACGGTGGCT
TTCAGTTCGTACATCCCGCCACCTGTCAATGCAACTGACAATGACACGCA
TGCAAACTCACGCACTGTGGTGGTCCAAATGCCGATTATCTTTGAGGGTA
AGTTACAATATGTTCTCATGGAATATGTAATTGAGGCCATTATTTGTATG
ATATATGCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003083 | genome | xfSc0003083:476..1960 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL64812_cuf0 |
| Biotype | protein_coding |
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