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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL64834_cuf1 >transcript:BL64834_cuf1-protein ID=transcript:BL64834_cuf1-protein|Name=transcript:BL64834_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=211bp
FRCENGPAIISHWQHWLPTFLGTKRTQYSGEAANLIANLKADWSEEVAAL
ATNNRTANQQGREGHGKSLDMLMEHYNRILKTVLRSSGGHLTCQHAKEVS
LAIPLLDEARKFCDRLFNIKRTVRHTSPSAQKDIEVMTKAIVEGKVYSPT
PGRLLFPGKGFEDPVVKGMQKVTEDGWLETFLQKGSTIEEDGQQSALEEH
EDADLDALMDE Run BLAST on NCBI mRNA from alignment at xpSc0039703:24898..30729- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL64834_cuf1 ID=transcript:BL64834_cuf1|Name=transcript:BL64834_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=5832bp|location=Sequence derived from alignment at xpSc0039703:24898..30729- (Branchiostoma lanceolatum)
TTTTCAGGTGCGAGAATGGTCCAGCTATCATATCGCACTGGCAGCATTGG
CTTCCAACTTTCCTGGGAACGAAGCGTACCCAGTACAGCGGCGAAGCAGC
CAACCTTATCGCAAACCTCAAAGCGGACTGGTCAGAGGAGGTAGCAGCTC
TGGCAACCAACAACCGCACAGCAAATCAACAAGGCAGGGAAGGGCACGGG
AAATCCCTTGACATGCTTATGGAGCACTACAACAGGTATGTTCACTTAAG
CTATCCAACAATTACGTTGGAATAAAACTCTTATTAGCAATCTCATACAA
CATGAAAAGTATGGTATTACTGTATCTGTAATGCATACACAACTTGTTTC
TTATACAGAACATTGACAATTGGCTCATGCACTTACATCTGAAGTACACT
ACACTAAATTAACTACAGCCTATGACATGTACATGCAACTGCGTTGACAA
CATGTATATACAAATGTACAATCTGTAGACAACATGACATGTGGTAGACA
CCGGATAGAAGTTCATGTGCACTGTAATGTACACAACTGTACTGTTAAAT
AGTGATTATACATGTACATACAACAACTTCAAAAGTGATTGACACTAAAA
ACTGTCATGTCCATTATATATTACAGGATTCTGAAGACAGTTCTAAGGTC
TTCTGGAGGTCACCTGACATGCCAACACGCCAAGGAAGTGTCTCTAGCAA
TACCATTGCTGGATGAAGCCAGGAAGTTCTGCGACAGGCTCTTCAACATC
AAGAGGACTGTCAGGCACACCTCACCTTCGGCACAAAAGGACATCGAGGT
CATGACAAAGGCCATTGTGGAAGGTAAAGTCTACAGTCCTACACCAGGAA
GACTGCTGTTTCCTGGGAAGGGATTTGAAGACCCGGTGGTTAAGGGAATG
CAGAAGGTCACTGAGGACGGCTGGCTGGAGACCTTCCTGCAGAAAGGCAG
CACCATAGAGGAGGATGGACAGCAATCAGCCCTCGAGGAACATGAAGATG
CAGACCTCGACGCCCTTATGGATGAGTAAGGTAAGTTAGATGGTGTTTGT
GATGTCTCGTAGAACCCGGGGGTTGCGATTTCTTCTTCTGACTCTCTTCT
CTGGGACTTCTTTTTCAGGGATCAAATTGTCAATCACTGACAGGATCAAC
TGCCTGTAAGCTTTTGGCACACCCTTTATTTTGTCAAAATCCTCCAAAGT
ATGCATTTTATAGCATTCCTTTACAATGTTGCCTAGTGTATTATCTGACA
TGATGGCACAGGGCCCAATAAAGACAAATTGCGGATTTTGTGCAAACAAC
TCATCCCTGAGTTGATAGAGTCTTTTTTTCAGTTCGTCCTCGTTGTTTGT
GTCTTTCCTCCTATCTAACCTCTTCTGTGCAGTCTTGCGCTTTACTCCCC
TGTTCTCCTTTTCTTTTGGTGCCGTGAAAATACACGTGTTTTCTTTCTTA
TCACATGCACTGCAACATCGCATGTGTTCTTCTTCCTCGCCTTCTTCCAT
GTGCTGTTCTTCGCCTTCTTCTCCCATGTTCTCCTCCAACTGCTCTTCAT
CTTCTCCCATGTTCTCCAACTGCACTTCATCCAACTGCTCTTCATCTTCT
CCCATGTTCTCCAACTGCACTTCATCCAACTGCTCTTCATCTTCTCCCAT
GTTCTCCAACTGCACTTCATCCAACTGCTCTTCATCTTCTCCCATGTGTT
CCTCCAACTGCTCTTCATCTTCTCCCATGTGTTCCTCCAACTCCTCTTCA
TCTTCTCCCATGTTCTCCTCCAACTGCACTTCATCTTCCCCATCTTCGTT
TGCCAACTGTTTGAGAAGTTCCTTTCGAATACAACCCTTTGTCTGCACTA
TCGCCTTTAGTCCTTCCTCCTTGTTTTTGTCCCCCTGTCCACTGAAGATA
ATCGCATGTGCTTCATCACCCCGTCTGCCTGCTCTTTCGATTTGCTGTTA
AATGGATAAAATGTAAATGTAACATCTTTCAACATTCACAAAGTACATCA
TAGGTTCTTTCAAACATCAGGCGATACGCAAAGAACACTGCAAACTACGT
TTTATTCCACTTGACAGGACTGGCACCCTTCTCGGGCCCATCTCTCAGTC
AACGCTCTGTTAACTGATACCAGACCTTTCCCAGCCCAAACCCTTTATCC
CCCCCCCCCCAGGTTCTGGGACATACCATTATCTGGTGTCGGGGTGACAC
CTATCATGACAGACCGATCTGTGTTTCTAACAATAATTCGAATCAGGCTA
TTAGAATCAGACCCGCCCTTAGTTTGCTGCCGTGTTTCGACTGGAAATTC
TTGTAAATGTAATTCTTCTTAGGAGTAGAAGCTTAAGCTCTGAACTGAAT
GCTAAAAATACTTATGGTCTTGTCCAAAGCAATTCCAGATTTATGTAAAC
AAAAGTTTCATAAAATCACCTGGTAAAGCTGTCCAACCGTTGATGGCAGC
CCGTATACTACAACACCCTTGACATCAGGGATGTCAATACCCTGTAATAG
AATTGTGTATGAGAAATTTATTTCTTTTTCATGAACCCTTACATATTTAC
ATGTATTCTTTCACTTATAGTCATTATCAGAGCTATCAGAGATGGATAAG
AAAATGCCATTGTTAGATAATTATAAGGGGTTTAGCTGTATACATGCAGG
TGATTTATTCATCTCCTTGATTGGACTCAATAAACTCACCTAACAAATAC
AATAATACATGACCACAGCCGTTGTGCATACCTGGGCCTTTATTCTTAGC
TACAGTGTTCTCTTTTATTATGATTTTGTCATTGACTGTTAACGGCATGT
TTGATAAAATTCAATCAACTCAGCCAAACAAGTATAAAGATGAAGTTAGG
ATCCATATCTAATATATACATACCATGCCAAAGGCAATTGATGCCACGAC
CACCCTTATGGTGCCATCCCGGAAACCAGCCAGCACCTGGTCTCTTGCAT
CTGTGGACATGTCTGCGTGAAAGGTTCTCACCGCCCCCTTTGTGTCTTGG
CAGCACTCAAGTTTTAACATCGCCCACACGTCCATCAATTTTTTCTTCTC
TGGCAGGTATACGAGATGCTTGTCGATGTCTGATGGTTGTCTAGCACGCT
TAACAACTTCCATCAAGGGTCCGAGATCAGCCTGTTGTACCAAAAATGAG
AAAAGGAATATAGATCTGCAAAACATTGTCTTCACAATAGTCACAACAAA
ACAGTAGCTTAAATCAATAGACAGGTTTGTTGTTTGCTAATTACCCACTT
TCCAAAATGCATCCAGAGTGATTTTAACTTCATTAGCCTTCATTAGCCTC
CATTCAATAGGCAATACCCCCACCCCCAGTAGATATGATTAAGATCTTGG
GCTACCCTAGACTACCCTCCAAGCAGAGGTCATGAGGGAAGATTGTAACC
TTTTTTAGCCTGAGTGTCATCCTGTTTCAGTTCCAGGCTTTACCTTTGAA
GGTAGAGCCTGGAACTGAAACAGGATGACACTCAGGCTAGACCTTTTATC
ATATGCCTCGTTTTTTGTCCGCCATCTCCCACTAACGCTTAGTGAAGGAT
AGCTGACAAAGAATGAGGCATATGATAAAAAGGTCACATTCTTCCCCCAC
GACCTCTGCTTGGAGAGTACTCTAGACATGTTGATTGCTAATATGTGTGG
TTCTAATTGTACCTTCATTGTGTGTTTTTTTTGGCAGACAAGGAAGATGT
TTCTCCTGTCCAGGCTGCCCTTCACAATCTTTGGCTTCTTAAGGTGGAGG
CTCTTGATGGTGGCATTCCGGACCTTCTTTGTTGCCGTCGCTGTTAAGGC
CATGAAGGGGACACCTTTCAAGATAGCCCGAAGACCTCCCATGTTGCTGA
ACGCTATCCTGAAGTCTTCTCCCCTGTTAATGATAATTTCAACTGTTGTT
AGTGCAAATATATATAGTGATAGCAGAGGAATAGTACTCAGGAATATTTA
TACAGATGATTTTGTACATGTACCTTGTTTGAAAAGTTCTGTTTTTGAAG
CTACACTTATGCATGCTGGATTGTAGATTGTTTGATAAAGAGAATGATAA
GGCCTACTGTGCCATACATTCATCATGATGGGAAAGTGTTATTGATCTAT
ACACACCACAAGGGTCTTATAGTATCTTGAATATATGTAAAGATGAGTTT
GTACTTGTACCTGGTTTGAAAAGTTCTGTTTTTGAAGCCACACTTATGCA
TGCTGGATTGTAGATTGTTTGATTAAGAGAACGATAAGGCCTACTGTGCC
ATACATTCATCATGATGGGAAAGTGTTATTGATCTTTACACCAATAGGGT
TATTCTCCAAGCAGAGGTTTTGGTCGGCTGGGGTAGTAGTGGCCGGGGGT
TTTTAGTCTGGCCTCCCGTAACCTCTTACCTTCTACATAGTTCGGCAATT
GTAGAAACCGTATTTCCTTTTTTTTTTGAAAACTCTTCCCTACATGATCT
ACTGTATACATGTCATTAAGTCATTTTGTGGGTGACAACATACCATTCTG
GTATGCAGTGTGCCTCATCCACTGCCACCAGTGCTATAGGCAATGGTGGC
TTCTGAAGCAGGTGTCGCCCTTCTTTCGAGACCGCTTGCTCTGGAGCCAT
GAAGACTGTAATGAAAGTACAATGCAGTTACAAACTTGTAAGACCTGCCT
TATTGAGATCTCATTCTCCTCTTGTTAAAAGGAAGTTTAAGTTAAGACAT
ATCGCTACTCTGTACCATGGACAAGGAAGCCACCAGGGTCCATGAGGATT
TCTTTATTGTTTGATATTGATATGTTGCAATACCACTGTGACTCATGCTG
AGATTTGTATTGTTAATTGTTGACATGCTGCAAAAGAAGCCACTGGTTTA
TTCTGTGGATATGTACTATTGTTGAGTTGCAAAGAAAACATTGGTTCATT
CAGGAATATGTATTTTTGATATGTTGAAAAATCCACTTGTTTATTCTCAT
GGTAATGTATTGTCGATATGGTAAGAACACAAAGTGGTATATTCAGGGAC
ATGTATTGTTGATAACAACATTGGTTTGTTTAGAGATATGTTTTGTTGAT
ATGTTGCAAAAAAACACTTGTTTGTTCATGTTATGTATTATTAACATGTA
CATTCTGGGATATGCACCGTTGATGTGTTGAAAAAACAAAACATGATTCA
GTCAGGGACAGGTATTTTTTATACTTACCCATTCGGACATTGTTGACTGG
CGTTTGTTGGAATTCTTGGATCTCTGCCACTGTTCTCAGATGTACGCCTT
TGTAGCCAGTAACTGTCTCATATCGATGGACCTGAAATAATAACAAATGT
GTTGTTTAGAAAAGTGGTACACCCTCCAAGGAGAAAATATATCAAATCGG
GAGGGGGAGGGGGGGGGGGCGTTCGTGATTGAATAAACACTGGCACGTCG
CTTTTCAAGTANGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGCGTTCGTGATTGAATAAACACTGGCACGTCGCTTTTCAAGTAATGAG
AAACAATTAACGTTAACAGTATGCAAATATACGTTACCTGATCAGATACA
AGTGCTTGGAGAGGCGAAATCACGATGACGATCGTTGGTACTTTAGAGAT
CGATGGCAAAATCTGATAGCAGAGGGATTTGCCTTGTCCCGTAGCCAATC
CAACAAAACAATCTTGCCCCCGGCAGGCGGCACGGATGGCTTCCAGCTGG
CCTTCCCTCAGCCCTGTAAAGCCCCACAAGTCCTTTGCCACCTGTACTGC
CCTTGACCCGACGTCATCCATCGTCAAGTAGAGACGGTAAGTGTTCTGTT
TTGAATTGACGGGTTTTGAACTGGCTGTGACC Coding sequence (CDS) from alignment at xpSc0039703:24898..30729- >transcript:BL64834_cuf1 ID=transcript:BL64834_cuf1|Name=transcript:BL64834_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1272bp|location=Sequence derived from alignment at xpSc0039703:24898..30729- (Branchiostoma lanceolatum)
TTCAGGTGCGAGAATGGTCCAGCTATCATATCGCACTGGCAGCATTGGCT
TCCAACTTTCCTGGGAACGAAGCGTACCCAGTACAGCGGCGAAGCAGCCA
ACCTTATCGCAAACCTCAAAGCGGACTGGTCAGAGGAGGTAGCAGCTCTG
GCAACCAACAACCGCACAGCAAATCAACAAGGCAGGGAAGGGCACGGGAA
ATCCCTTGACATGCTTATGGAGCACTACAACAGGATTCTGAAGACAGTTC
TAAGGTCTTCTGGAGGTCACCTGACATGCCAACACGCCAAGGAAGTGTCT
CTAGCAATACCATTGCTGGATGAAGCCAGGAAGTTCTGCGACAGGCTCTT
CAACATCAAGAGGACTGTCAGGCACACCTCACCTTCGGCACAAAAGGACA
TCGAGGTCATGACAAAGGCCATTGTGGAAGGTAAAGTCTACAGTCCTACA
CCAGGAAGACTGCTGTTTCCTGGGAAGGGATTTGAAGACCCGGTGGTTAA
GGGAATGCAGAAGGTCACTGAGGACGGCTGGCTGGAGACCTTCCTGCAGA
AAGGCAGCACCATAGAGGAGGATGGACAGCAATCAGCCCTCGAGGAACAT
GAAGATGCAGACCTCGACGCCCTTATGGATGAGTAATTCAGGTGCGAGAA
TGGTCCAGCTATCATATCGCACTGGCAGCATTGGCTTCCAACTTTCCTGG
GAACGAAGCGTACCCAGTACAGCGGCGAAGCAGCCAACCTTATCGCAAAC
CTCAAAGCGGACTGGTCAGAGGAGGTAGCAGCTCTGGCAACCAACAACCG
CACAGCAAATCAACAAGGCAGGGAAGGGCACGGGAAATCCCTTGACATGC
TTATGGAGCACTACAACAGGATTCTGAAGACAGTTCTAAGGTCTTCTGGA
GGTCACCTGACATGCCAACACGCCAAGGAAGTGTCTCTAGCAATACCATT
GCTGGATGAAGCCAGGAAGTTCTGCGACAGGCTCTTCAACATCAAGAGGA
CTGTCAGGCACACCTCACCTTCGGCACAAAAGGACATCGAGGTCATGACA
AAGGCCATTGTGGAAGGTAAAGTCTACAGTCCTACACCAGGAAGACTGCT
GTTTCCTGGGAAGGGATTTGAAGACCCGGTGGTTAAGGGAATGCAGAAGG
TCACTGAGGACGGCTGGCTGGAGACCTTCCTGCAGAAAGGCAGCACCATA
GAGGAGGATGGACAGCAATCAGCCCTCGAGGAACATGAAGATGCAGACCT
CGACGCCCTTATGGATGAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| xpSc0039703 | genome | xpSc0039703:24898..30729 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL64834_cuf1 |
| Biotype | protein_coding |
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