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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL69036_cuf0 >transcript:BL69036_cuf0-protein ID=transcript:BL69036_cuf0-protein|Name=transcript:BL69036_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=139bp
FSASQYMDPVSTAANSEGSAISSRTSAGLIGLGAVSALLLIGIVASAAVV
LLKRRRTSSRPKREDNGTSFENFAFDNSDYTDARTNNANDDGTNFYVIND
DSTNRRGPTYGTGQDEEYEMPDEGGEEGAYHTLDPRTLE Run BLAST on NCBI mRNA from alignment at Sc0000001:5140233..5141844- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL69036_cuf0 ID=transcript:BL69036_cuf0|Name=transcript:BL69036_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1612bp|location=Sequence derived from alignment at Sc0000001:5140233..5141844- (Branchiostoma lanceolatum)
ATTTTTCTGCGAGTCAGTACATGGATCCAGTGTCAACCGGTAAGAAAAGC
ATGTCTCATACACTCAATAGTACCGTTGTTCGGGTATTCGTAATATATGA
AAATGTTTGAACATGGTTTCTCTATACAAGTAATGATATAATTTTCATAC
TTTCTTAAGCCGCAAACAGTGAAGGGTCTGCGATTTCTTCACGTACGTCA
GCAGGTATGTATGCGATTTCTTCACATACGTTGGAAGGTGTGTATGCGAT
TTTACCCTAAACCAACGTCTTCATAATACTAACTGTAGGTCATGACTATA
TATGTTCCTTTACATTGAACCAAAGTTAGTGTATCATAAACATACATCCC
GAAAAGCGGCCATATTATGGCCGAACAAGCATTCGAAGTAAAATAAAGGC
TTTGACTTGACTTGATTTGACTTGACTATCTTTTCATCCTGAAATACATA
GACACAGCAGACATGAAAGCAAATGGATAGATGGATGATGCTCAGATAAC
ATAATGCATCATATAAGCAAGACTTCCACCCCAAACTTTTCTTGTACTGA
TTTTGGAAGCAATTAGTGCCGTGGTTTGTCTTCAGCAGGACTGATCGGCC
TTGGTGCAGTATCAGCTCTTCTCCTGATCGGAATTGTTGCCTCAGCAGCT
GTAGTTTTGCTCAAACGAAGGTCAGTAGACAATATCATTCTTTTTTCTAA
CTATGCATCCATCTCAATTTTGAGTTTAATCTTCTACCCCCACTCAATGT
TTTAAAATGGTAGTTTGACAATAGAAGACAATTTGAGATACAACAACAAT
CTAAGTTTAGATTTGTATCCGATAAGAGAGAATTTCTAGAAAGAAAGTAA
GTAAGTTGTACAGTCATAGAAGCCAAACATCCCTCCTTTTCCTTTTTCAT
CCTGTTGGACGATCGGTCCAGCGTCGATGGACTCAGCATGCAATGTTGAA
TTTCTTAAACACTGTTCTTGAGTTGAGCCCTTGACGTGAACAAGAAGGCA
GGGTATAGTGATGACAGCTTGCCTTAGGACTGCCACCACTCTCTCCACCA
TCCATCAGCAGGCAGGAGGCAGAACATATCCGACGTCCCGTCCAAGTTGG
ATGGCCGCATTCGTTGGCCGAACCAGTATGCAATGCAAATTCTGGAACGC
CCTCACCGACACGAAGAGCCGGGTGCAGTTCGTCCGCCCTCTTTCGAGGC
CGTTGACCGTCTACTATTTAACCCTTAGTCAGGTAGATGGTACGATGGTT
AACCATGGTAAGCCAAACATATTGAATGAGATACAGCGATGTAAGGAATT
AAAGTCCTAATTCCATAGAAAACGCAATCTTTAGTTCTGAACACAATCAT
CCTTTCCAGACGGACCAGCTCAAGACCAAAGCGTGAGGATAACGGCACAA
GTTTTGAAAACTTCGCGTTTGACAACTCGGACTACACAGACGCTAGAACA
AACAACGCGAACGACGACGGAACGAATTTTTACGTCATCAATGACGACAG
CACCAATCGCCGAGGACCGACCTATGGGACTGGCCAAGATGAAGAGTATG
AGATGCCTGATGAGGGTGGTGAAGAAGGGGCCTATCATACCCTGGACCCG
CGCACACTAGAG Coding sequence (CDS) from alignment at Sc0000001:5140233..5141844- >transcript:BL69036_cuf0 ID=transcript:BL69036_cuf0|Name=transcript:BL69036_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1668bp|location=Sequence derived from alignment at Sc0000001:5140233..5141844- (Branchiostoma lanceolatum)
TTTTCTGCGAGTCAGTACATGGATCCAGTGTCAACCGCCGCAAACAGTGA
AGGGTCTGCGATTTCTTCACGTACGTCAGCAGGACTGATCGGCCTTGGTG
CAGTATCAGCTCTTCTCCTGATCGGAATTGTTGCCTCAGCAGCTGTAGTT
TTGCTCAAACGAAGACGGACCAGCTCAAGACCAAAGCGTGAGGATAACGG
CACAAGTTTTGAAAACTTCGCGTTTGACAACTCGGACTACACAGACGCTA
GAACAAACAACGCGAACGACGACGGAACGAATTTTTACGTCATCAATGAC
GACAGCACCAATCGCCGAGGACCGACCTATGGGACTGGCCAAGATGAAGA
GTATGAGATGCCTGATGAGGGTGGTGAAGAAGGGGCCTATCATACCCTGG
ACCCGCGCACACTAGAGTTTTCTGCGAGTCAGTACATGGATCCAGTGTCA
ACCGCCGCAAACAGTGAAGGGTCTGCGATTTCTTCACGTACGTCAGCAGG
ACTGATCGGCCTTGGTGCAGTATCAGCTCTTCTCCTGATCGGAATTGTTG
CCTCAGCAGCTGTAGTTTTGCTCAAACGAAGACGGACCAGCTCAAGACCA
AAGCGTGAGGATAACGGCACAAGTTTTGAAAACTTCGCGTTTGACAACTC
GGACTACACAGACGCTAGAACAAACAACGCGAACGACGACGGAACGAATT
TTTACGTCATCAATGACGACAGCACCAATCGCCGAGGACCGACCTATGGG
ACTGGCCAAGATGAAGAGTATGAGATGCCTGATGAGGGTGGTGAAGAAGG
GGCCTATCATACCCTGGACCCGCGCACACTAGAGTTTTCTGCGAGTCAGT
ACATGGATCCAGTGTCAACCGCCGCAAACAGTGAAGGGTCTGCGATTTCT
TCACGTACGTCAGCAGGACTGATCGGCCTTGGTGCAGTATCAGCTCTTCT
CCTGATCGGAATTGTTGCCTCAGCAGCTGTAGTTTTGCTCAAACGAAGAC
GGACCAGCTCAAGACCAAAGCGTGAGGATAACGGCACAAGTTTTGAAAAC
TTCGCGTTTGACAACTCGGACTACACAGACGCTAGAACAAACAACGCGAA
CGACGACGGAACGAATTTTTACGTCATCAATGACGACAGCACCAATCGCC
GAGGACCGACCTATGGGACTGGCCAAGATGAAGAGTATGAGATGCCTGAT
GAGGGTGGTGAAGAAGGGGCCTATCATACCCTGGACCCGCGCACACTAGA
GTTTTCTGCGAGTCAGTACATGGATCCAGTGTCAACCGCCGCAAACAGTG
AAGGGTCTGCGATTTCTTCACGTACGTCAGCAGGACTGATCGGCCTTGGT
GCAGTATCAGCTCTTCTCCTGATCGGAATTGTTGCCTCAGCAGCTGTAGT
TTTGCTCAAACGAAGACGGACCAGCTCAAGACCAAAGCGTGAGGATAACG
GCACAAGTTTTGAAAACTTCGCGTTTGACAACTCGGACTACACAGACGCT
AGAACAAACAACGCGAACGACGACGGAACGAATTTTTACGTCATCAATGA
CGACAGCACCAATCGCCGAGGACCGACCTATGGGACTGGCCAAGATGAAG
AGTATGAGATGCCTGATGAGGGTGGTGAAGAAGGGGCCTATCATACCCTG
GACCCGCGCACACTAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:5140233..5141844 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL69036_cuf0 |
| Biotype | protein_coding |
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