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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL69649_cuf0 >transcript:BL69649_cuf0-protein ID=transcript:BL69649_cuf0-protein|Name=transcript:BL69649_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=144bp
MVVKNDEDNPYRFLTCWKNMQETNPWNTCFTAGVIHLFSTNSVYLHMSCD
GCVIKLHHDATFFGALKLFSGQHKSLSANVHGEKFPSDDATPVKIPPYIA
HRVQATKSNIEKLTKNNFLTILHELRNGHKYRITKRGKIVLKRR Run BLAST on NCBI mRNA from alignment at Sc0000087:356876..359032+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL69649_cuf0 ID=transcript:BL69649_cuf0|Name=transcript:BL69649_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2157bp|location=Sequence derived from alignment at Sc0000087:356876..359032+ (Branchiostoma lanceolatum)
AAACTGTCCTCACAAAGCAATGGGAACAGTTTGAACCATCCGACAAGTTC
CGCTTTCACAGCGGCATACTGACTGTTTTGGAGGAGGGTGACTATTATAT
CTACAGCCAGGTAAGATATGCCTAACTAAAATAGACATTGATCAGTAGAA
ACAGAATGTTTCACTGCTTTTTTTGTTGTTCTGATACATGTAGAATGGAC
CCATTCCTCAAGCTAACCGACATCTATCGCACAGTAGTTTTCTCTCAGTA
AGACATCCCATTCACTCACTCAGTCACTGACTCAGTAACTCAGTCACTCA
GTCACTCACTCATCTCCGCCGCTGTTCCGTCTTTCACTGAGGCAATCACT
GAGATGTCAATCCAAGACATCTGGAGCCGCATAGTTCCCGTTTAGAACTT
TTGCTCAGTCTGTATCTTGTCACCTTGTTACAATAAATAACAAATCTATT
AACATGAACTAATGAATATACTTTTGATGGTCGATTTTCAAGGTGGTCAA
ATTCATGCTCAGAAACTCCCCTGTCCAGCCGAATTCGAACGCCGTTCCAT
GATGTTCGAAATGACGGCGTTCGAATTGGGGCACCTGCGGTCATTGCATG
TTTTTTTTTCTGTAAACACGCGCGGTCGGGCCCATTTTCCCCGAATCAGG
AGAAAAACTTCCTTTTTCACAAATTGTACCTGTTTCCTGGAGACCATATC
TATGCTGGCACTTTATTGTGAACATCCAACATGTAACGAAGCTACTGGCG
TAGTTTTTGCAAACCTTGAATATTAGAAGGATTGTTTACGCCGGTGTCAA
TTACCCCTCCCCCTATCCGTGCGGCATGACATGCGTTCAAACATCGTAAA
GGATTAGCTTCAAAAAGCATCCTCCTTACCTCATTAACGGCTCGAAATGA
CCGTAACAGTTTTCCCGAGGTTTGCGTTTTTGGGATTTTTGAAAAATGCC
CTTGATTTATAATTATGGGTAATTCAGCACGAAAAATGTCCAAAAATGCC
TTTTTTTCACAGATTTGTTGATATCAACAACTATACGAATCAGAAATTAA
AAAATCCCCCAAAACAAAGTTTTGTTTTGTTCCTGGTCGACGAAAAATAT
GAAAATAAGAGATATTATTTGACATTTGAAGCCAGGCCTTTGCGATGTGT
GCCTGAAAAAAAGGTCGAACGCGCGTAGCAACGGGAAAGAATACACTAGT
GACAGACCACCGTGTTTAGTCAGAAACAAATATCCATAATGTATATACAA
TTTGTTTCATACTATTATAACATGTCCAAATAATTACCAAATCTCCCTAA
AAACAAACATGTCCATTTTCAGGTTTACTACTGGCCTGGTTTAACGACAA
AAAATCGCCAGCAACCAGCCATTCTGTAATGGTTGTAAAAAACGATGAAG
ACAACCCATACCGTTTCTTGACATGCTGGAAGAACATGCAGGAGACGAAT
CCCTGGAACACCTGCTTTACCGCAGGTGTCATTCACCTGTTCAGTACCAA
CAGCGTGTACCTGCACATGTCATGTGATGGGTGTGTCATCAAACTGCATC
ATGACGCAACCTTTTTTGGAGCCCTGAAACTTTTCAGCGGTCAGCACAAA
AGTCTCTCTGCGAACGTACATGGAGAAAAGTTCCCCTCAGATGACGCCAC
CCCAGTTAAAATCCCGCCATACATTGCCCATCGTGTTCAAGCAACAAAGT
CAAATATTGAAAAACTGACGAAAAACAACTTCTTAACCATACTACATGAG
CTACGGAATGGACATAAGTATCGGATTACGAAAAGAGGCAAAATAGTGCT
AAAGCGAAGATAACTACTATGGGTAATCATTAAAGTTTATATCCATTGTA
ACGTACTTTTTTATATATCTGCTATAATGGTACTCATATCACTGTTATCT
ATCGATTTATTGAGAATGCAGCTCTTTAAGGTCTCATTCCTGTATTACTA
CGAGTGGGTACTAAAAGAATCCGTGCCCCAAAAAATGAACGGCTGCATGA
GTGTGTGTCTATATCGGTGGGATATTTCCTTTTAGGTAGCCCTGCTGATC
TCAAGCGTCTGACTGATGAAAGCTTGTTTGTAACTGAAGACATTAGCTGG
CAAAGTTCGGCAGCCGCGCGCGAGGTCGGAGGTACACAGCCCGGGCATTG
TGTGTGA Coding sequence (CDS) from alignment at Sc0000087:356876..359032+ >transcript:BL69649_cuf0 ID=transcript:BL69649_cuf0|Name=transcript:BL69649_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=435bp|location=Sequence derived from alignment at Sc0000087:356876..359032+ (Branchiostoma lanceolatum)
ATGGTTGTAAAAAACGATGAAGACAACCCATACCGTTTCTTGACATGCTG
GAAGAACATGCAGGAGACGAATCCCTGGAACACCTGCTTTACCGCAGGTG
TCATTCACCTGTTCAGTACCAACAGCGTGTACCTGCACATGTCATGTGAT
GGGTGTGTCATCAAACTGCATCATGACGCAACCTTTTTTGGAGCCCTGAA
ACTTTTCAGCGGTCAGCACAAAAGTCTCTCTGCGAACGTACATGGAGAAA
AGTTCCCCTCAGATGACGCCACCCCAGTTAAAATCCCGCCATACATTGCC
CATCGTGTTCAAGCAACAAAGTCAAATATTGAAAAACTGACGAAAAACAA
CTTCTTAACCATACTACATGAGCTACGGAATGGACATAAGTATCGGATTA
CGAAAAGAGGCAAAATAGTGCTAAAGCGAAGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000087 | genome | Sc0000087:356876..359032 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL69649_cuf0 |
| Biotype | protein_coding |
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