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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72711_cuf0 >transcript:BL72711_cuf0-protein ID=transcript:BL72711_cuf0-protein|Name=transcript:BL72711_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=395bp
ENVAFMKIHKCGSSTTQNIFLRFGHVHRLLVALPKEKDKPQIGRFGKITE
HDYEAPPRGSRWNVFAHHAVYNRTGILRHMPENTKFVAILREPVSRFLSA
FYYFDMAKYFPGMTGRRRRLSIPEKRNPWLGRIHLSRQKSHPRTSNSSIL
QYLQNPTKWDNVYHPAGPKDPNYEHACVRNCMVRDLGFPESSYENSTAID
DFIEGIEQDFTLVMILQYFDQSLVLLKRKMCWSIRDILYDHRHRTKKAKA
AKPNITDEMKQTFLKHNKADSVLYQHFNNSLWRQIKQEGEDFHAEVRHFQ
QVNMDVTKYCCDKNKLKDLVVTNSTWNEKFEITPTFCSMLGRKRQSWDDI
LRSQYDSSTLEILRKAVASSRYRGTYRRVKMYKKHVSLVHGHAGN Run BLAST on NCBI mRNA from alignment at Sc0000055:748763..750204+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72711_cuf0 ID=transcript:BL72711_cuf0|Name=transcript:BL72711_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1442bp|location=Sequence derived from alignment at Sc0000055:748763..750204+ (Branchiostoma lanceolatum)
TGAAAACGTGGCCTTCATGAAAATCCACAAATGTGGGTCTTCAACGACTC
AAAATATTTTCCTGCGATTCGGACACGTCCATCGTTTACTAGTGGCGTTG
CCAAAAGAAAAGGACAAGCCACAGATCGGGCGCTTTGGCAAAATCACGGA
ACACGACTACGAAGCGCCCCCTAGGGGTTCACGTTGGAACGTCTTTGCTC
ACCACGCTGTGTACAATAGAACTGGCATTCTCCGACACATGCCTGAAAAC
ACCAAGTTTGTGGCGATTTTGCGAGAGCCAGTTTCTCGGTTCCTGTCGGC
ATTTTACTACTTCGATATGGCGAAATACTTTCCAGGAATGACAGGTCGCA
GGCGTCGCTTGAGTATCCCAGAAAAACGGAATCCGTGGCTAGGACGAATA
CATCTATCGCGCCAAAAAAGTCACCCCAGAACATCAAATTCCTCCATTCT
ACAATACTTACAAAACCCAACCAAATGGGACAACGTATATCATCCCGCGG
GACCGAAAGATCCTAACTACGAACACGCATGCGTCAGGAATTGTATGGTG
CGAGATCTCGGGTTTCCCGAGAGTTCGTACGAGAACTCGACAGCCATCGA
CGATTTCATTGAAGGCATCGAGCAGGACTTTACATTGGTGATGATTCTCC
AATACTTTGACCAGTCTTTAGTGCTTTTAAAACGGAAGATGTGTTGGTCT
ATTCGTGATATTCTCTACGACCATCGACATCGAACTAAAAAAGCCAAAGC
GGCCAAGCCAAATATCACTGACGAAATGAAACAAACGTTCCTAAAACATA
ACAAAGCAGACTCCGTCTTGTATCAACATTTTAATAACTCCTTATGGCGG
CAGATCAAACAAGAAGGGGAGGATTTCCATGCGGAAGTACGTCATTTTCA
ACAAGTAAACATGGACGTCACAAAGTATTGTTGCGATAAAAATAAGCTAA
AAGATCTCGTAGTCACAAATAGCACCTGGAACGAAAAATTTGAAATAACA
CCTACCTTCTGCTCAATGCTGGGTCGAAAAAGGCAATCGTGGGACGACAT
TTTGCGAAGTCAATATGACAGTAGTACTCTGGAGATACTGCGGAAAGCGG
TTGCGTCATCCCGGTACAGGGGAACATATAGAAGAGTGAAGATGTACAAG
AAGCATGTAAGCTTGGTGCATGGCCATGCGGGGAATTAATTAATGACGAA
AGAACAAACGTTGTTGCTCAACATAGGTGAATAGTTTCATCAGGTTGGTA
AGTTACAGAATAACAAAACTCCTTGTACACAGCCAAGTGTCTTATACACA
CCGACGTTTCAATATAATGACCATCTGTCACCTTCCTCGTGACAATTCTG
ACTGGTTTATCGTTGACATTCCATTTAACTAGAATCAACAACGTTTCTGT
TGGCAGCGCTAAGCTACCTCGTCTGAACTAGAGTAAAATAGG Coding sequence (CDS) from alignment at Sc0000055:748763..750204+ >transcript:BL72711_cuf0 ID=transcript:BL72711_cuf0|Name=transcript:BL72711_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1188bp|location=Sequence derived from alignment at Sc0000055:748763..750204+ (Branchiostoma lanceolatum)
GAAAACGTGGCCTTCATGAAAATCCACAAATGTGGGTCTTCAACGACTCA
AAATATTTTCCTGCGATTCGGACACGTCCATCGTTTACTAGTGGCGTTGC
CAAAAGAAAAGGACAAGCCACAGATCGGGCGCTTTGGCAAAATCACGGAA
CACGACTACGAAGCGCCCCCTAGGGGTTCACGTTGGAACGTCTTTGCTCA
CCACGCTGTGTACAATAGAACTGGCATTCTCCGACACATGCCTGAAAACA
CCAAGTTTGTGGCGATTTTGCGAGAGCCAGTTTCTCGGTTCCTGTCGGCA
TTTTACTACTTCGATATGGCGAAATACTTTCCAGGAATGACAGGTCGCAG
GCGTCGCTTGAGTATCCCAGAAAAACGGAATCCGTGGCTAGGACGAATAC
ATCTATCGCGCCAAAAAAGTCACCCCAGAACATCAAATTCCTCCATTCTA
CAATACTTACAAAACCCAACCAAATGGGACAACGTATATCATCCCGCGGG
ACCGAAAGATCCTAACTACGAACACGCATGCGTCAGGAATTGTATGGTGC
GAGATCTCGGGTTTCCCGAGAGTTCGTACGAGAACTCGACAGCCATCGAC
GATTTCATTGAAGGCATCGAGCAGGACTTTACATTGGTGATGATTCTCCA
ATACTTTGACCAGTCTTTAGTGCTTTTAAAACGGAAGATGTGTTGGTCTA
TTCGTGATATTCTCTACGACCATCGACATCGAACTAAAAAAGCCAAAGCG
GCCAAGCCAAATATCACTGACGAAATGAAACAAACGTTCCTAAAACATAA
CAAAGCAGACTCCGTCTTGTATCAACATTTTAATAACTCCTTATGGCGGC
AGATCAAACAAGAAGGGGAGGATTTCCATGCGGAAGTACGTCATTTTCAA
CAAGTAAACATGGACGTCACAAAGTATTGTTGCGATAAAAATAAGCTAAA
AGATCTCGTAGTCACAAATAGCACCTGGAACGAAAAATTTGAAATAACAC
CTACCTTCTGCTCAATGCTGGGTCGAAAAAGGCAATCGTGGGACGACATT
TTGCGAAGTCAATATGACAGTAGTACTCTGGAGATACTGCGGAAAGCGGT
TGCGTCATCCCGGTACAGGGGAACATATAGAAGAGTGAAGATGTACAAGA
AGCATGTAAGCTTGGTGCATGGCCATGCGGGGAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:748763..750204 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72711_cuf0 |
| Biotype | protein_coding |
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