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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72964_cuf0 >transcript:BL72964_cuf0-protein ID=transcript:BL72964_cuf0-protein|Name=transcript:BL72964_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=100bp
MYASNEPRERDTLNAYMSAFQIVGVILSALIQQGTFALFHADLGYNPCSN
GTHNSTNHGPSRDTEKTAYMVAAAVGSGLLVLFGLAAVFGVPERKGKETF Run BLAST on NCBI mRNA from alignment at Sc0001245:12..4736- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72964_cuf0 ID=transcript:BL72964_cuf0|Name=transcript:BL72964_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=4725bp|location=Sequence derived from alignment at Sc0001245:12..4736- (Branchiostoma lanceolatum)
AAAAAAAATAATATTAGGGACAATAAAAGAACATCGATATCAATGTGATA
TTTCTGCGAGAGCAGCGCTGTTAGAATGGCATAGCTAAAAGGATTGGCTC
AAATCCTTTCTCTGATCTTTGTCTTAATTTTCTTTTCATTGCCCAGGGGT
ATGGCAATGCCAGGGACACACTAGTGATGTATGCCAGCAACGAACCGAGA
GAAAGAGACACCCTGAACGCGTACAGTACGTACTATCTTACCATTACAAG
TGTCTTTAGCCATATTTTCCAACACTTTTTCTTCTCATATCTCAGATTTC
AAGATACTCAGTGCCACAGAAAAATTTAACTATATCTTTAGATGCAACAG
TTCATACAGTGTTGAAATAGGCAAATATATAAAACATTGTTTGTTATTAG
AAAAAATATGATACTCAAATTAGCTCAACCGGAATCATGTAAAACCTAAG
ATAGTCATTTTGATGTAATGAATAGTCATATTCCATTCCTATGTCTTGTT
CTGTGTTTACTGTTGTTGACATAATCCACTACAGTATATATATCGTGCAA
TGAATCTAAAGTTCTTCTATCTTATTTTAACGTACAATGGTGCCATTCTC
CGTAGTAACCGCTTGTGGTTAGCAAGTGAAAATATTGAGCCATCGGTTGC
TTCTGGGGATGGCAACCAGGTTAATTCTAACTCAAACTCTCATGTATCAG
TAAAATGTTAGTGTGACAAATAAAACTTCGACAAAAAAATCAAAATTTAT
GTCAACAAATTTGCACAAGCTGTGCTCTTAAATAATTTTGGGTACGTTTT
ATGCTTTTGTTGTCTTTTATATCATACTTTTCGTTCCCAAAGATGACCCG
ACCAGGCCCCAGATTGGAAATGTGACCCTAGCATAAGACAGTATAATCTG
GCTTTCCTTTGTGTCGCAGTGTCGGCCTTTCAGATTGTTGGTGTCATACT
CTCGGCACTGATCCAACAAGGGACGTTCGCACTGTTCCATGCCGACCTGG
GATACAATCCGTGTAGCAATGGGACCCACAACAGTACAAACCACGGTCCA
TCAAGAGATACTGAGGTAAGTGTCATTTCGCCCAAACAAGGTAAAGGTAA
AGCAGCCATCCTCAAGCATGATGCATGATGTTTATTCAAGTAGCTAGTAG
TGCAATGCGGCTTCGCCACGGCTCGCGTTTTGGGCCAAGCACACCGGGTC
AACCCCATTCTTCTCCATAAGTGTGTTGGGTTCTTTTACGTGCAGAGGTT
TGACACTTGACGCTTATGCCTAAAGCTCCCTCTCACACGGGGCCGCCGGC
TTTACGTCACCATCCAAAATGACAAAGGCAATCTCTTACAACATATCAGC
GTCCGAGCTCAGGAGTCGACCCTTAGGATCGAAATCGGGCCCTAAGATTG
CGCCACGAGAAATAAAAGATCCCATGCACCCGTGAAATATTTTTAGTTTA
TCAAATAGACCGATCCCAAAGCCACGCCCCTTGTTCTATTTCGAATACCT
CCGTCAAAAACAGGGCTTGACGGACAAGAAATGGCCGCCGCGGCCAAGTT
GAAAATAATGTCGACTGACTTTTGTTAAGTTTTTGGCTCTAAAACACTTT
CAAAGCGGGTCAAAGAAAACTGCGCTGCATTCTTTGTTGAAGTCCGTATC
CATCGAGTATAGTTGTTTGAGGCCGAGGAGGGGGTGCACGTAATTACAGC
GAGAGCCTACTGTTTTCGGTCAATGCTGAAGCAGTAGGTGCCGCATATCA
TTACCATGTTGGTGGGCATCAGCTCCCGGGTTTTGACAAACAGCCGATGC
ATGTGTAAAACAGGGTACATATATCTGTAACAGGGTTCCCACTGTCCTGA
CTGCATGCACAAAAGCTGCATGATCTTCAGTAAATAAGAGTTTAAATACG
CTTCTTTTACTTCCCTGTTCACCGGTAAATTAATCACTATCACACACCAG
TACGGAAGAGGCGAAACTATACGCTAGCAGGCGCTGTAGTAGCTGCCAAT
GTGGTACAAGCTCCCTCCAATTGAGTGTCCGCAGCCTTTTATAGACTATA
CCACACTACTTTCAAGAAGGGGGTGTCGTCCTGTGATACTACAGTACTTT
AAAATTCATACAAATCTGTCAAAAGGATCTTTGGCTTATAGGTGCGAACA
GGCATACACAACCTAAAACAACCCCGTCACCCGAAACTAGTGCTGTGTAC
CGGTACTGTGTAAAAATTGATTAGGTACAGGTCCGAAATACCGGATCATG
AAGTACCGGTACTTTGCCGATGTAGATTTACACCAAGCATGTGCTTATTT
TGTGACTGATATCCTAACCTCATGGCCTCATGCAACACCAATCGTGACCA
AAATGACACATTGGAACAACGTAACTAATATACAACAGATCATTTAGGCA
GGACGGGAGTTTTGATAGCAAGGCCAAGGGAGTTTGGCAGTAGGAAACCT
ACTTATGTTCTTTGAATAAAGATACTGACAGGTTGTAAACAATTTAATTA
TGTTTCTGTCATTATTGAAGAAGTTCAGTAAAACACAAGTTAATTTTTTT
AATTGTTCAGGTACAGGTCCGGACCTGTACCTAACCTTTGTACCGGTACC
TGTACCTGTACCTGATATTACGTTTAGGTACGCAGCACTTGCCGGAACTC
CTTCCCTGAGGTAGTTGAATTGCCGCAAGAATCTTATCCAATGTGAGGCC
ATGTGATTTGAACATCACAGCATTCGGCCAGTACACGTGGTAGCAAATGT
ATCGTGACAGCTCAATCTGAATATGCAGCACTTAAAAAAGCTTTTATACA
CATGTTGTCTACAGAAAACAGCCTACATGGTTGCAGCAGCTGTTGGATCT
GGACTCCTTGTACTTTTTGGACTGGCGGCAGTTTTCGGTGTTCCAGAGAG
AAAAGGAAAGGAAACATTTTGATACATTGAATATGTAAAGACCTGTAAAA
GATCACAATTCTACTAATACAAGAGGAACAAGACAAAACAACAAGATAAC
TCTTTATCACTCTACTTTAGGGCGAGTACATACTACTAATTATACTTTCT
CATTCATTATGTCGTCGTCGTATAAATCAATATAGGTCCCATCATTGTAT
GATAAAAAATATGTTGCTATAGGAAATGGCAAGGGCTACTTTTAATTTTT
TTTTTCAGATATCAGGGGACAACAACAGTCGTCCTGTTTCCCCATTGATG
ACATTAAACAGCTGGCCCGCCATCGTCCTTTTCTCGTGCTGTTTGTGATA
GAAGCCTTGTTGGAGCTGGGCATTTATGTAAGTTATTTCACGTTGCTATA
TTGTTGTTAGATACGTATCGTAAATAACTTGAATTCGAAACAGACAAATG
TAACGTTGTTAACCTTTATTTTTTTAAATTAGTGAGTCCCAAATGTCAGT
CAATAACACAATTTACATAAACCACTTATTCAATAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTTTGCATTAATTATGCAAATTAGGAATTC
ATTTGCATAATTGGTATCTGTTGATGCTCCACTTTCCATAAACTACATAT
GTTACATGTATTTGAGTCTTAATATGGAAAACACTGAAAATATAGATTTT
CCTCATCAGCTATGCAAATTAAGTCCAATTAGCAAAATTTGCACTTCAAT
GTGTACACCTCTGTCTAAGCTACCCGCATACTAAATATCATGGAAATCCG
TCGTTCCTTTGTTCAGTTATTCTCCTTAGAAGATTTTCACAATAACGCCC
CTGCAGTTCCAGAGCGAGCTGCTAGGGGGTCCAAGCCCACACCAATTCTT
CATTACACCACAAGCTATCTGCCACCAAAAAATCAAGACCATAGCACGTC
CAGGTCAAGAGATACAAAAATGGAATTTCTGCTGCAGTACCAAGGTCACA
TACCAGGGGGCCCAAAATCGACCTTGAATTTTGGCTTCACAACACCTGCC
CACATACCAAATATCATCGTAATCCATCAAGAGGTTCTTGAGTTATGCTG
ACTACAGTAGTCCGGAAACACAAACAAACAGACACACAGACACGCCCAAA
ACTATATCTCCATTTTTCATGGAGATAATAAATGGTGAATGCACTGATCA
ATAACGTTAGAAGTTGAAGGTGGCGTGCTTTGTAATAGATTCAGTTATCA
TTTGACCATGCATGTTGAATTATCCCACATACACTGCAGACGAAGCAGAT
AAACACTGCCTTGATGCTACAGTACACATTCGGCATGTCCGGTCAGGTGT
TCTACGTCCTTTTCGTGTATATGGT Coding sequence (CDS) from alignment at Sc0001245:12..4736- >transcript:BL72964_cuf0 ID=transcript:BL72964_cuf0|Name=transcript:BL72964_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=909bp|location=Sequence derived from alignment at Sc0001245:12..4736- (Branchiostoma lanceolatum)
ATGTATGCCAGCAACGAACCGAGAGAAAGAGACACCCTGAACGCGTACAT
GTCGGCCTTTCAGATTGTTGGTGTCATACTCTCGGCACTGATCCAACAAG
GGACGTTCGCACTGTTCCATGCCGACCTGGGATACAATCCGTGTAGCAAT
GGGACCCACAACAGTACAAACCACGGTCCATCAAGAGATACTGAGAAAAC
AGCCTACATGGTTGCAGCAGCTGTTGGATCTGGACTCCTTGTACTTTTTG
GACTGGCGGCAGTTTTCGGTGTTCCAGAGAGAAAAGGAAAGGAAACATTT
TGAATGTATGCCAGCAACGAACCGAGAGAAAGAGACACCCTGAACGCGTA
CATGTCGGCCTTTCAGATTGTTGGTGTCATACTCTCGGCACTGATCCAAC
AAGGGACGTTCGCACTGTTCCATGCCGACCTGGGATACAATCCGTGTAGC
AATGGGACCCACAACAGTACAAACCACGGTCCATCAAGAGATACTGAGAA
AACAGCCTACATGGTTGCAGCAGCTGTTGGATCTGGACTCCTTGTACTTT
TTGGACTGGCGGCAGTTTTCGGTGTTCCAGAGAGAAAAGGAAAGGAAACA
TTTTGAATGTATGCCAGCAACGAACCGAGAGAAAGAGACACCCTGAACGC
GTACATGTCGGCCTTTCAGATTGTTGGTGTCATACTCTCGGCACTGATCC
AACAAGGGACGTTCGCACTGTTCCATGCCGACCTGGGATACAATCCGTGT
AGCAATGGGACCCACAACAGTACAAACCACGGTCCATCAAGAGATACTGA
GAAAACAGCCTACATGGTTGCAGCAGCTGTTGGATCTGGACTCCTTGTAC
TTTTTGGACTGGCGGCAGTTTTCGGTGTTCCAGAGAGAAAAGGAAAGGAA
ACATTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001245 | genome | Sc0001245:12..4736 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72964_cuf0 |
| Biotype | protein_coding |
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