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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72965_cuf0 >transcript:BL72965_cuf0-protein ID=transcript:BL72965_cuf0-protein|Name=transcript:BL72965_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=106bp
MGLMMSDDKGISAFPSGDSLFSWTGTLTGPMGTVGLWTRYCDLLCKGSFY
YLYRYSRFQDSFLFIYFDLPHFVDLFKMSSQTGLQDFDHRTPGHAPTLSR
KMWWVL Run BLAST on NCBI mRNA from alignment at Sc0001314:625..7865- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72965_cuf0 ID=transcript:BL72965_cuf0|Name=transcript:BL72965_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=7241bp|location=Sequence derived from alignment at Sc0001314:625..7865- (Branchiostoma lanceolatum)
CGATGGTCAAGCCATTACCGTAAAGCTCAACATCCACTGTGGGGTCAGCC
GCAAGCACTGGACTGATTTTGGCCAGACATGCTTGCGACTTGAAGGTAAT
TTCGCACGCCCCTCTGTGTTTTCGCTGGATCCCTTCGATGTCTGTCGGAT
TCACGCCGTGTTTCGCCAGCAGATCAATCACATCGTTGAATTTGGCATCT
TCCTTCTCGATGAAGGTAACTCCAGCACTTCGTTGTCTCGTAAATTTAGA
CAGAGTTGGCATCTTCAATGCAGGCGTTTAGCTAGAGAGCCTTAACAGTA
TACCAGATGTCGGGGGGTTACGATCGCTGGTCTGCGTGCTTGGCCCTGCT
AACGANCGGGGGGTTACGATCGCTGGTCTGCGTGCTTGACCCTGCTAACG
AGGGGAGGAGACGAGACTGTGACAGCTGGGGTCGCGGTCCGCGTGCCTCG
CCCTGCTAAGCAGGGGAGGGGACGCTTTCTTGACAGCCGGGAGATACCAC
TCTTATTGTTTTGCAGGGGTGTTGGCACACTAAACAAGCCAGAACAATTA
TTTTTAGATGAAGAGCCGATCAGGAACGTATGATCAGAAGCACTAACCTT
AGAAGCAGAAAACTAGAACGCAACACAACTGTTCTCGGCAGCCAGGAGCG
GGGAATCAGGAGTGGAACTGCGAGCCGGTCCTGCAACGTGAGACGGGTGG
GATGGAGGGCCTCGTTTGGCCGAGGCCAGTCCGAGAGAGGACGTCGGTGG
TCGAAAAACTTCCACAGTTCAGTCAAAACTGAGTGTATGGACAAAGTTCA
ACCGCCTAAGGGAGCTCTACGATTTCAGATACATTCCTCAACCGACATCA
CACCAAATGATCAAGCATATCCGCCAAAAACCGACGGAAGAAAGTACTCC
CGTGGCACGGACCCCTCGGACACGTGTGCTTCCACTGACAGCGAAGGGTC
TTTCTGATCCCATGCGACAAGCGGAGTCCTACGACGTAACCGTTTGAGCT
ACCTTGTAGTCGACTAATTTCGATGGTACATTTATGCTTTAAACTCACTA
CATGGTATTATTTATGTTGATTTTTGGTCGTTTTTTTTTTTACAAAATCA
GTTTTTTCTTGTGCAATTTTGTGACCATTTTTCAGGATAGTGAAGTTCTA
AACCACAATGCAATGATATTTCCAAACAGTTGTAGCGTTTTCATTTCGGT
GGATAGTTAAGAGGTTGACAAGATCATCCTTCCAAAATGAATGATGTTTA
CCGACTTAAAGGTTTACTGAGAAAATGTTTCTGGGTAGAAAATATCAAAC
AATTTAAATTATGTATTATTTATTATTTATTACTGATTGATTGTGTGGTA
GCATTCCATACTTCATTTGCATGAAGATGTACCATACTCTCATGCTGATA
TGCGATTTTTCCGAGGAAGAACCCCCCTAACGTACGCACCCCGAATTTGG
CGTCACCCTGGAGCACCTGCTTGCGACTTGAAAAGTTTAAAAAGTGCGTA
CGTAAATAGGGATTTTACGGTAAGGTCTTCTGGTATGTGACACAGTGTTG
AACCAAGTACCATTGATCGAACGATGGACCATCGATGGAAGGTAAGACCC
ACAAAGGCGACAAAAATCAAAAATAATTTAGAAATTGGCCAAGTAGATAG
CAAGAGGTCAGTTTGAACAAATTCCAAGAGGTCAGTCAGCCCCCATAGAA
CGTTTTTTAGAAGTATGATTTGCAACCTCCAAACTGTAGGCAGTTCCTTG
TGAAACCGTTTGCTCTGTCAAATCTTTTTGGTAAGGTGTCTTTAAGTTTA
GATTTCACAAGGTTGGAAGTTTATACCTTCTGTCTCCTCTTATTTTCAGG
TTGCAACAAGAACTAATGGGACTAATGGTAAGATCATTTTGCCATAACTT
TTATCATTCCTTAACAAATCTTCTTTGAGGCAATTCTCTAACAAGAATTC
TCTATAGAGCCTGACTAAGACTGTTGAGTAGAGGATTTTCGGTTGTGTTA
GAAGAACTTGACCTCTGATGTTGTGTTTCCTTCTCCCCAGATGTCTGATG
ACAAAGGCATCTCAGCATTCCCCAGTGGAGACAGTCTGTTCAGCTGGACA
GGGACTCTCACAGGACCCATGGGAACGGTAGGTTTGTGGACTCGATACTG
TGATCTGCTCTGCAAAGGCAGCTTTTATTACTTGTACCGGTATTCCAGAT
TTCAGGACAGTTTTTTATTTATTTATTTTGATTTACCACATTTTGTGGAC
CTTTTCAAGATGTCATCCCAGACGGGACTGCAAGATTTTGACCATCGCAC
ACCGGGGCATGCCCCTACTCTTTCTCGAAAGATGTGGTGGGTTCTTTAAC
GTGCGCGGGGTGTGGCTCTCCCCAAACACGGGACCTCTATTTAACGTCCT
AACCGAGGGACGTCCCTAACCCTAGATGAGCTAGGTACTCATTTACACTT
GAGTGAAGTGAGGAAAGTCGTGTTAAGAGCCTTTCCCAAGGGCACAACGT
CGGGGCGGAAGTTCGGACATGTCTCTGGGCACAACCCGGGATTAGATCCC
GGGTCCCATTGTTTGACAGCTGCGCGCTCTACACTTGCGCCACACAACGC
CACAACCATCTTAACACAATGTAGAGCATGTTTTGCCATCACAAGTTTGT
GGTGAGAGCTCTGACCCTGCAATACTTACGACGTAATTATGATACAATAA
AGTCCTGCAATGCTTGTGATATTTTTATGTTTGCAGTTTTCTCTGTGATG
GTCAGAGCTTTCACCACAAACTTGTAATGGCAAAACATGCTCTGCATTGT
ATTAAGATGGTTCTTTCAACTCAGGGCTCCAGACTAACTTTTAGACCTAG
GAGGACTGTGCTCCTAACTCAAAAAAGTTAGGAGCACCAGCAAAAATCTA
GGAGCACCACTACAAAAAGTTGGAAGAACAAGCAAAAGTCCAGAAGCGCA
CGGCCGGCGCTAGCGTTCACTTTCATCGGAAAATTCCGGCGTTTGAAACA
TTTTACAAATCAAACAAATACATCACAAAGGAGAGAAACTTATATCCTTT
ATTTCTATGGGTAATTTTGCCACTAGGAACGGATAGTTTTTGTACCGCGG
GCGTGGGAATATGATAGAAAATTCACCGACGATTTTCGCGGTAGGGTTGG
AATACCTAAATATTTTCAGCTTACCGCTTACTTCTGCAGCCAATATCCTG
CCGCAGGTCTGAATTTTTGATTGTCGCACCGTGCGACCGTGATTTTAAAT
CTAGTCGCATTCTCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGTATGCGATTTTTCCGAGGAAGAACCCCCCTAACGT
ACGCACCCCGAATTTGGCGTCACCCTGGAGCACCTGCTTGCGACTTGAAA
AGTTTAAAAAGTGCGTACGTAAATAGGGATTTTACGGTAAGGTCTTCTGG
TATGCGACACAGTGTTGAACCAAGTACCATTGATCGAACGATGGACCATC
GATGGAAGGTAAGACCCACAAAGGCGACAAAAATCAAAAATAATTTAGAA
ATTGGCCAAGTAGATAGCAAGAGGTCAGTTTGAACAAATTCCAAGAGGTC
AGTCAGCCCCCATAGAACGTTTTTTAGAAGTATGATTTGCAACCTCCAAA
CTGTAGGCAGTTCCTTGTGAAACCGTTTGCTCTGTCAAATCTTTTTGGTA
AGGTGTCTTTAAGTTTAGATTTCACAAGGTTGGAAGTTTATACCTTCTGT
CTCCTCTTATTTTCAGGTTGCAACAAGAACTAATGGGACTAATGGTAAGA
TCATTTTGCCATAACTTTTATCATTCCTTAACAAATCTTCTTTGAGGCAA
TTCTCTAACAAGAATTCTCTATAGAGCCTGACTAAGACTGTTGAGTAGAG
GATTTTCGGTTGTGTTAGAAGAACTTGACCTCTGATGTTGTGTTTCCTTC
TCCCCAGATGTCTGATGACAAAGGCATCTCAGCATTCCCCAGTGGAGACA
GTCTGTTCAGCTGGACAGGGACTCTCACAGGACCCATGGGAACGGTAGGT
TTGTGGACTCGATACTGTGATCTGCTCTGCAAAGGCAGCTTTTATTACTT
GTACCGGTATTCCAGATTTCAGGACAGTTTTTTATTTATTTATTTTGATT
TACCACATTTTGTGGACCTTTTCAAGATGTCATCCCAGACGGGACTGCAA
GATTTTGACCATCGCACACCGGGGCATGCCCCTACTCTTTCTCGAAAGAT
GTGGTGGGTTCTTTAACGTGCGCGGGGTGTGGCTCTCCCCAAACACGGGA
CCTCTATTTAACGTCCTAACCGAGGGACGTCCCTAACCCTAGATGAGCTA
GGTACTCATTTACACTTGAGTGAAGTGAGGAAAGTCGTGTTAAGAGCCTT
TCCCAAGGGCACAACGTCGGGGCGGAAGTTCGGACATGTCTCTGGGCACA
ACCCGGGATTAGATCCCGGGTCCCATTGTTTGACAGCTGCGCGCTCTACA
CTTGCGCCACACAACGCCACAACCATCTTAACACAATGTAGAGCATGTTT
TGCCATCACAAGTTTGTGGTGAGAGCTCTGACCCTGCAATACTTACGACG
TAATTATGATACAATAAAGTCCTGCAATGCTTGTGATATTTTTATGTTTG
CAGTTTTCTCTGTGATGGTCAGAGCTTTCACCACAAACTTGTAATGGCAA
AACATGCTCTGCATTGTATTAAGATGGTTCTTTCAACTCAGGGCTCCAGA
CTAACTTTTAGACCTAGGAGGACTGTGCTCCTAACTCAAAAAAGTTAGGA
GCACCAGCAAAAATCTAGGAGCACCACTACAAAAAGTTGGAAGAACAAGC
AAAAGTCCAGAAGCGCACGGCCGGCGCTAGCGTTCACTTTCATCGGAAAA
TTCCGGCGTTTGAAACATTTTACAAATCAAACAAATACATCACAAAGGAG
AGAAACTTATATCCTTTATTTCTATGGGTAATTTTGCCACTAGGAACGGA
TAGTTTTTGTACCGCGGGCGTGGGAATATGATAGAAAATTCACCGACGAT
TTTCGCGGTAGGGTTGGAATACCTAAATATTTTCAGCTTACCGCTTACTT
CTGCAGCCAATATCCTGCCGCAGGTCTGAATTTTTGATTGTCGCACCGTG
CGACCGTGATTTTAAATCTAGTCGCATTCTCAAAATACTGGTCGCATACA
TGTTGTATGCGAGTCGCACTCACGAGCGCTGCAACTGCAAACTTGAAACT
AAGGGACAGTACGAAATTTAGCGGGGGGAGGGCCAAGGGAG Coding sequence (CDS) from alignment at Sc0001314:625..7865- >transcript:BL72965_cuf0 ID=transcript:BL72965_cuf0|Name=transcript:BL72965_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=642bp|location=Sequence derived from alignment at Sc0001314:625..7865- (Branchiostoma lanceolatum)
ATGGGACTAATGATGTCTGATGACAAAGGCATCTCAGCATTCCCCAGTGG
AGACAGTCTGTTCAGCTGGACAGGGACTCTCACAGGACCCATGGGAACGG
TAGGTTTGTGGACTCGATACTGTGATCTGCTCTGCAAAGGCAGCTTTTAT
TACTTGTACCGGTATTCCAGATTTCAGGACAGTTTTTTATTTATTTATTT
TGATTTACCACATTTTGTGGACCTTTTCAAGATGTCATCCCAGACGGGAC
TGCAAGATTTTGACCATCGCACACCGGGGCATGCCCCTACTCTTTCTCGA
AAGATGTGGTGGGTTCTTTAAATGGGACTAATGATGTCTGATGACAAAGG
CATCTCAGCATTCCCCAGTGGAGACAGTCTGTTCAGCTGGACAGGGACTC
TCACAGGACCCATGGGAACGGTAGGTTTGTGGACTCGATACTGTGATCTG
CTCTGCAAAGGCAGCTTTTATTACTTGTACCGGTATTCCAGATTTCAGGA
CAGTTTTTTATTTATTTATTTTGATTTACCACATTTTGTGGACCTTTTCA
AGATGTCATCCCAGACGGGACTGCAAGATTTTGACCATCGCACACCGGGG
CATGCCCCTACTCTTTCTCGAAAGATGTGGTGGGTTCTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0001314 | genome | Sc0001314:625..7865 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72965_cuf0 |
| Biotype | protein_coding |
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