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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73300_cuf2 >transcript:BL73300_cuf2-protein ID=transcript:BL73300_cuf2-protein|Name=transcript:BL73300_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=147bp
MRTYSCCVGMVTAVWTLGNTARRYQVIATVNKPFVMAATIDYKHSSAPSL
KFVLDITECSNIPINKTLFAFDWDLTLKVYNRVSQDMFVRGREESVDVLH
HLKQEGGRLVVVTARDPSPLVWETVNIELSALDLPELFDDGVKGXMA Run BLAST on NCBI mRNA from alignment at Sc0000001:8125656..8128036+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73300_cuf2 ID=transcript:BL73300_cuf2|Name=transcript:BL73300_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2381bp|location=Sequence derived from alignment at Sc0000001:8125656..8128036+ (Branchiostoma lanceolatum)
ATTGCAGACAAAATGGCGGAAAAAACGTCGTAGATGAGTTTGAAAGAGAA
ACGTTGTCAAACTGTGACGTTTTTCTAACGACAGAAACATGTGGGTGATA
AGTAAGAAAGTCCAGGAGTATCTACTGTTGTTGGTAAGTATGTATCAATA
TATTTGGGGGGACATATTCAATATTTGGGCGCGTGACCCCAACTAATTAG
GGGTGTTGCCATCTATCCAGAACCAGAAATTCTGGTTCGGAATACATGTA
GATACTGGGCAACACCCTTTAGTAATTTTAGTAAGTAGCTGACGTTACCT
TATCGCATCTTTTCTGTGCCTCCTCTTGGACATGTCTCTAGAGTAGAGTA
GAGTAGAATTTTCGGTCAGGTAGGACTGCTCCAGTTTAGACCGCTCTTCA
TTGTTGAATTCCATTTCACTCAACTGTCATGGTGGGTTTGTGTGGATGTT
CCAAAGCTCTGTGGTTGTACTTTACGGGGTGAACTTCCATGTACCTGTCG
AATCTGGCTTTGAAGGCATTAACTGAGGGAGCGTTGATTACTTCTTCTGG
GAGTCGATTCCACCAGGGGACCACCCTGTATCTACATATATAGATGTTGC
TGTGATATGTAGACATCATGGTACAATTTATCACAGTACTACTAGTAGTA
CACAAACCAAAAAGTACTTTTGAATGTTTTAGGTCTTACCCATTTATAGG
GCCCTATGCTATTGAGACTTTACACTCACAAGTGAGTGTATTTTACACAC
ATGCGTGATATTATTGATAGGCATATATCCTCATCTACAGTGATTATTAC
CATGATGATTTATATTGTTTCTCAATTCTCAGCTCCTTTCTGCCATTGTG
CTGCTGGCCTGGGGGTTTGTCATCTATGCAGGGCGTATTTCTGCACTGCG
CTTGATCACACAGACTCTTCAGAACTGACGGGAACTGTCAATCAATCAAT
CAATCAACCTGGCCTGATGTGAGTTGGAAGGAGGAGAGGAAAGCATGAGG
ACCTATAGCTGCTGTGTTGGAATGGTAACAGCAGTTTGGACCCTTGGTAT
GTGTGCAAAGTCTTCATAAAGATCATCGCTTCATCATGGTCTGATATGGA
CAGAAATGTATATGAAAAGTACTTCCTCATTTCTAATATTGAGTGAGGAA
TGCTCAAATATTTTCATAGTAATGATCCATATGGTGTTATGAGAAAAAGA
CTTGCTATATCCTAGAATAGTGAATAATTTTACACTGTAAAATTCTTTTG
TTAAACTTAGAATGTCTGTATTACTTTATATCTTTTCTGTGAATGTTGTG
AAGATCATAAGTGGAATTCTTGACTAATCTGTTGTAGGGAATACTGCAAG
ACGTTATCAAGTTATTGCAACTGTGAACAAACCTTTCGTAATGGCAGCTA
CTATAGACTATAAACACTCTTCTGCACCCAGTCTAAAGTTTGTACTGGAC
ATAACAGAATGTTCTAACATTCCTATAAACAAAACTCTGTTTGCCTTTGA
TTGGGACCTAACATTAAAAGTGTACAATAGAGTCTCCCAGGACATGTTTG
TCAGAGGAAGGGAGGAATCAGTCGATGTTCTACACCACCTGAAACAGGAG
GGAGGAAGACTGGTTGTTGTAACAGCCCGCGACCCCAGCCCTTTAGTCTG
GGAGACTGTTAACATTGAACTCTCGGCACTCGACCTTCCAGAACTATTTG
ATGATGGCGTGAAAGGAGNGATGGCGTAAAAGGAGAGAAAAAAGGATGCA
TTCCTATGAAGACTGCTTCAGACACATCTATGTATGTCGGCCATGGCATC
ATTGTCGCTGGATATGAAAAAGCAGAAGCCTTAGATCAATATTGTAAAAG
CCAGGATATGGAATCAGAGCATCTGGTTTTCGTGGATGATTTCGTGGTTA
ATGCCTACAACGTTGGTGCATATTTCGGCCAGACGGAAAAGTCAGGATTG
TTCAAGAAAGTGACAACAGTTTGGTGGGACCCAAAAGCCTTGGTACCACA
TGACTTACCAAGTCTTCCAAATAGTGAGAACTCCTATTCAGACTATCTGA
TAGAGTATAGGAAGGTGTTTGGTGTAGACTGATTATTCATAATTGCTTAT
AGCCTTTTACAACTTTGTAGAAGTGTTCTTTTTTTTCATATTGGTAGAAG
TGGAGGTAAAAAAACTTACAATGCAAGTAAACTGTTACTACTAGTGGGAA
TCATTTGATTGATATGACTTATATGATAGATAGATCATACAAAATATGAA
GAATAAATCAAAGGTTTATTTTAGAACATTCAAGTTTGAATGGTGAATTA
CTTCTTACAGTATTTGCCAAAGCTTTCATTTTTTTTGTTTCAAACAATAA
AAAGCAGCACAAGTAGTTTCAACAGCAGTAA Coding sequence (CDS) from alignment at Sc0000001:8125656..8128036+ >transcript:BL73300_cuf2 ID=transcript:BL73300_cuf2|Name=transcript:BL73300_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=888bp|location=Sequence derived from alignment at Sc0000001:8125656..8128036+ (Branchiostoma lanceolatum)
ATGAGGACCTATAGCTGCTGTGTTGGAATGGTAACAGCAGTTTGGACCCT
TGGGAATACTGCAAGACGTTATCAAGTTATTGCAACTGTGAACAAACCTT
TCGTAATGGCAGCTACTATAGACTATAAACACTCTTCTGCACCCAGTCTA
AAGTTTGTACTGGACATAACAGAATGTTCTAACATTCCTATAAACAAAAC
TCTGTTTGCCTTTGATTGGGACCTAACATTAAAAGTGTACAATAGAGTCT
CCCAGGACATGTTTGTCAGAGGAAGGGAGGAATCAGTCGATGTTCTACAC
CACCTGAAACAGGAGGGAGGAAGACTGGTTGTTGTAACAGCCCGCGACCC
CAGCCCTTTAGTCTGGGAGACTGTTAACATTGAACTCTCGGCACTCGACC
TTCCAGAACTATTTGATGATGGCGTGAAAGGAGNGATGGCGTAAATGAGG
ACCTATAGCTGCTGTGTTGGAATGGTAACAGCAGTTTGGACCCTTGGGAA
TACTGCAAGACGTTATCAAGTTATTGCAACTGTGAACAAACCTTTCGTAA
TGGCAGCTACTATAGACTATAAACACTCTTCTGCACCCAGTCTAAAGTTT
GTACTGGACATAACAGAATGTTCTAACATTCCTATAAACAAAACTCTGTT
TGCCTTTGATTGGGACCTAACATTAAAAGTGTACAATAGAGTCTCCCAGG
ACATGTTTGTCAGAGGAAGGGAGGAATCAGTCGATGTTCTACACCACCTG
AAACAGGAGGGAGGAAGACTGGTTGTTGTAACAGCCCGCGACCCCAGCCC
TTTAGTCTGGGAGACTGTTAACATTGAACTCTCGGCACTCGACCTTCCAG
AACTATTTGATGATGGCGTGAAAGGAGNGATGGCGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:8125656..8128036 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73300_cuf2 |
| Biotype | protein_coding |
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