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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76969_cuf0 >transcript:BL76969_cuf0-protein ID=transcript:BL76969_cuf0-protein|Name=transcript:BL76969_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=103bp
MSLLTEYTNTYLSLFCHFQTGYYYFYPSLYLYTDAYAQDTGLSGAQYSHR
RSTSYHPYYYCQTFEAQRTGGKGDNSFASVVQPPGHLDAADYAGSCPQYL
SLF Run BLAST on NCBI mRNA from alignment at xfSc0000465:48..5612+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76969_cuf0 ID=transcript:BL76969_cuf0|Name=transcript:BL76969_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=5565bp|location=Sequence derived from alignment at xfSc0000465:48..5612+ (Branchiostoma lanceolatum)
ATGAGATAAGGAGTGCGGAAAAAGTCCCCATCCCTTGACCACCTCCCTCT
CCCTGCACTGGCGAGCCCACATCCCCCTCCTTTTCCCTTTTCCCAATCCT
CACCTCCCAAACCTCTCCCTTTCCCCTAACCTTCTTCACCAGAAGATTTG
TCATTAACGACGCATGACACCTCCGCCTTTCTCAAATTCTTTTAATGCAG
TATAGGATACATTATATTATTCACTGTGAAATGACCCACATCCTTATCTA
TCCCATCCTCTCCTTCCACAGCGGCACAAAACCTTTCAACTCATTCAGAT
CCTTGTACAACTGGATTAAGTTAGCGACGCTTGACACACGTCCGTCAGAA
GTACTCAGGGCTGCTGCCAAGTTCCCTGCTGGGCTATTAGCCTGCATTAC
CTTAGCCAACTTCATATAATGTTCCGCAGTCGGCTCAGCGAACCACCCTA
CATGGGCCATTATATCCTGCTTAGACGACCCCGCAAACGCCAAAGTCAAG
GCACACCCCGTCCTAAAACTATGTCCCGTTTCCCCTTCATCCAGGTTTGC
CGCTCTTAAGTGTACCCTTAATCTGGCCTCTGCTGCCCCAGACGAAAACG
GGTTTTCCGTAATTTCGCCCTTAGCTGAGGTAGCTCTGAATACATACCCC
GTCACAAGGGACAGCCCTACTTCCTTACAAATATCCCAGTACATCTCCAG
GCCACTGACTGGGCAGATAGTCGTGTTTTCCAGTCTCCTGATCCCAAACA
CATTAGGTCTATCGGCCCTGACTGTCTTGCCCTCGGTGTGATTGAACAAT
AGCCCACCTCTATCTGGATATACCATAATTTCATTGACCTTTGTGTGACC
CAACTCGACAAACCTATCACCCGCAAACATGGCCATCTTGAAAAACGCAC
TATCCCTTGCTAGTATATAAATATCCTTTGGGGAGATGTCTTCCTCCACT
AATTTAGCATTGATGTAGAGAGACAACTTTTCCAACTTGTCAGGGAAAAA
AGGGATGGCCTGCTTTGGTATCACTAAAGCACTTGACTGCTCCCTTTTAA
TGGCTGCTAGGTAATCTTTCACCTTCCTATGCGCCGCAGGGTTCCCCAAA
CCCGGACCATCCTTACCCCCTCCGACTCTACCCACAGCTGTGAATATAGC
CCTTAACTTTCCTATCATGGCGTCTACCGTGCCTGCCGCTAGCCTGCGGG
GGCAAACACAATCTGCAGCTTGTGGCAGACCTAAAGACGGACAGTTGTTT
ACATGAACTTTTGTTTTCCCTTTCCCGTCTTTCCAAACTAGAAATCTCAA
CACATCTTGAGGAGAGGCGGACATCACATCTTTAGGTTGTGGGAGCGATG
CCAGAAATACTTCCAATTCCTTATGTAGCGCTGATTTTTGTTTCATGTAT
TTCGTCACCGAATGCTCTACCTGCTTAATCCTAGCATCCAAACTAGCAAT
ATCAATAGGCTGCGACAATGTCGTCTTAAGCATTCCCACACGTTTTCTAG
CGTAACCGCACATTTGGCAAAAGTTAAAAGATTCATCGTTCGGGTGTGCA
CATTCTGGGCATGCCACCGCTGGACTGCAAAATCTTGGGACTCTAGGTAG
AACCTGTAAACAATAAATACAAAGACTCCATATAGTCTGTTGCCTCATAC
ATTTGTCTTTTATTTCATAGAATTCACACACATTATGTACATTGATAGCC
CCAAAGTCACTAACAAAAAAACCCTCTATACTACGTGACAAATTACCACC
TAATCTCCCATGCCCATAGGTCCCATTCTAAAGGGCATGGAGACCACCCT
GCGGGCGAGGGAACATTCACCACCCCAAACTCCCCTTTGCGCCCCAACCG
GGTGCGCTTAACTGCCGCTGCTGCCAAAATTGGCCACCAATACTTGACGG
GTGAAGTCTGCGGCGCTACCACCAAACATGGATATCGGCATTGCCTTAGG
TGGTTTATCACTTGCCCCACCAAGGTCACCGGCGGGAACACATATCCATT
ACCACACTTGCGAAGATCCTCCCCAAACTGTTGGGCGAAAAAATCCACTG
CCGTTGCCCCCCGAGCTGGGAACGGAGCGATAAAGTTGGCCAACTTGGCA
TTGGATGGTACTGCCATACAGTCTATACCATATGTACACCCTTCTGTCAC
CAACTTCTTCCACGCCTTCTCAGTAAGTGTCATGTCCCCCTCCGAATAAG
ACCTAGACGGCATATCCGCGGGGTTGTCCTTAGACCTTATGTATGCCATG
GACACGGAGCAGTTCAGGTTCAAGGATAGGAAAAATATGTCTTTCAATAC
ATCAAAGATCTGTTTCGACTTCCTTCCTTGAGCCCTCCATGCGTACAATA
ATGCCTGATTATCCACCTGCACATGAACCCTAGCATTTTTACACTTATCC
ACAGCCGCTTCCATAACATACTTAACCGCCAATGCTTCCTTTACATTGAT
ATGGAGAGCTTTCTCCTGCTGTGACCAAGCATCACCCACTACCATCTGGG
ATTCCCTCCCCGGGTCTATCACACCACCCCAACGAGAATCGGAGGCATCT
GACGCCAACTGTATGGTCAGATGTCGTTCCTCTCTCCAAGGAAACGTTCC
CTGCCACTCATCCAAGAAGCCCCAATGCTCCACTTCCTTCCTCAGATCTC
CCCGTATATAAATCATCTTATCCGACCGAATCGCCTGAGCAATAGCCAGA
TTGCACTCCCTCGTAAACAACATAGCCCCAGGCACCGCTACCGCAAACGA
AACTATCTTCCCTACGAATTTTTGCAACGTCTTCACTGGGACTCTCCCAT
CCTTAAGTATCTGCAATCTTAAATCCTTAAAGCTTCCCTTCTTTACCTCC
GGGATTGCAAAGGCCATCAACAAAGAATTTACTATCATCCCTAGGAATGT
CAGAACTTGGGTTGGGACCAGAACTGATTTTCCCAGATTTAAGAAATATC
CCAACCTGACTAACATTGTAGTCAACAAAAAGATGGCCTGCTCCGCCCTC
CTGAAACAAGTAGCATCGTCTGCCACTACATTCTGACCTGGCGTTACCAA
CTGCCCCGCATGCCTGTCATCGATGTACTGCGTAGAGGGGACCCCTACTC
GCCTGACATAACCTGTCACCGCTAAACCCAAAGTGTTATAAATCCACGCT
GACAAGGACCAGCCAAATGGTATACATGTGCAAACAAATATGAAACCGCC
CCATTCGAAGCCTAGCAACCTTCTGGACTGTTGGCAAACTGACACATGAT
CGTACCCCGACTTATCATCACATTTAGTCTGATAACTCCCTCTATGTACA
TAACGCGTAACATCCATCAACTTGTCTAACGAGAATGGTATGGCCCTAGT
GAAAAGGTTGAGGAAACGCATATCGCAACAAAGACGCGGCTTGGACGGTT
CAACTGTCAAAGGCATGACTAGATGCGGTGGTTCCACCTCCCCCACTTTC
CCCCATAACTGAACCGCCCCTGTTAACAAACGCTCCTCAATCGTCTCACT
TATGAACCTCACAAAACTCTTGCATGACAGCCCATTCGGGAAGATCTTTC
TTGGGGGAAATGATGCATCATAATGCTGCCCCTGCCAAACCCCTTTATAA
GGTACGATAAAATCCTCTACATTGACACCCTTAGTAATCCAAGTTAACAA
CATGTCCTTATTCGTGTGTTCCATTAATACCAACTCCCATTCTTCGACAT
AGTTATGGATATTGCCTGCTATAAAGTCATTAGGGTTTCTAAACTTGACC
ATGGCAGCGTTGCCATGACTAACACCCTCTACAACGTCGCTGAAGGTAGG
AGCTGGCGGGCTGGTGTTGTCCCAAGGCTGACTGTTGCTATTCACCCACG
AGTAACTCTCCCGTTTATTGCGAACAGCTGCTTCTGGGTCGAAGAGAGGG
TCACATTCCCACTCTGGCACATCAAACAAACCCTTGGAGCGATAGAGCTG
TAAAGAACCAACGAACCAATATAAATACCTTTTACACTTTTAAAAACTTT
TTTTAAAGTCAGCCCTGGGAAACACCAACCCACAAAGGTGGGGATAAGGG
AACAGGAAGCCCCTGGTGCTTGCCATGGCGCTACATTTTACAAAAACAAA
AATACCACGAAAATAACGCTAATTCTAATGTACCAAAACACACATTATAA
GTCAGAGTCCAATATATGCATCAACCACTCAAACTTTATTCGCAAATCCT
GTCCGGTCCGGTCCGTTACACACCGAAATATTCAAATCACGGTACAAGTA
CCTTTGAGAAAAACAAACTTCTTCACATTTCTTCTTTCTGTGTCACAATT
CAGGTACCATGCAAATATTTCAGTTTCTTCACATTTCGCCTTTCCGTGTC
GCTTGACGTTTCAACCACACATTTCCAACTTTCTTCACAATTCCTCTTTC
TATGCCTAAAAAATACACATTTCAGCTACAGAAATTCAGACACAATACAA
ACTATTTCACTTCTCTTTCCGTATTGCTATACGTTTTGTATCAAAACTTT
CTTCACATTTCCTTTTCCTGCCTTGTTAATCACTTACAAAATACAAAATA
CATATTTCCAACTTTTCTGACATTTTCCCTATCAGAATGATACAGCGAGT
CTACATTTCATCTTTCTGCATTGTGACACATTCACGTCTACACATTTCAA
ACTTTCACATTTCCTTTACTTCTGCATTGACACAGGCCCACCAAACCACA
TCAAGCCTTTCCTTTTTTTTCCACATTTCTTTTCTTATTTGCAATGTCAT
TACTCACAGAATACACAAATACATATCTCAGTCTTTTTTGTCATTTTCAG
ACAGGGTACTATTATTTCTATCCCTCTCTCTACCTCTATACTGACGCCTA
CGCACAGGACACCGGGCTATCAGGTGCTCAGTACTCCCACAGGCGTAGCA
CCTCCTATCACCCCTATTATTATTGCCAAACATTCGAGGCTCAGAGGACT
GGTGGTAAGGGTGATAACTCCTTTGCGTCTGTTGTACAGCCACCAGGCCA
CCTTGACGCTGCTGACTATGCTGGGTCGTGCCCACAATACCTGTCACTCT
TTTAGTCACTTTTCTTGTTGCATCAGTAGAATACACCTCACGGATAGCTA
GTTTCAAGTTCGGATCATGGCGGTGTAAACGCAGAACTTCGGCCGCAGCC
TGGTAGTCTTCCGACTTTCTATGGCCCTCACGCTTTGCTGCCGCCGCCAG
GTCTTCTACGAGTTGCATGGCTGACCCGGGATCGAACAACGAGTCCGGCC
GTTGAACGATGCTTCTTAAATCACGGAGGATAGCCCTCACCCCGGCCTGT
CCCCTCTGGAACCCCTCCACGGTGGCTTGCAGCGATCTCACAAGCTGGAA
GAGTTCCTACACAAACAACATATAAGGTGTCATCCATAAATAGGCTAACA
CTCCACGTGTCTTTGACCACACAGGCTATCACCCCCAACAGCCATACAGT
CCATCGCGCAATAACACTTCCACCACACAGGTTATCACCACATAAGCTCT
CTCTCCACTCATGTTATCCCTCCACGGGGTAACTTTCCACAGGTTAATCC
CCACACAAACTCACG Coding sequence (CDS) from alignment at xfSc0000465:48..5612+ >transcript:BL76969_cuf0 ID=transcript:BL76969_cuf0|Name=transcript:BL76969_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=312bp|location=Sequence derived from alignment at xfSc0000465:48..5612+ (Branchiostoma lanceolatum)
ATGTCATTACTCACAGAATACACAAATACATATCTCAGTCTTTTTTGTCA
TTTTCAGACAGGGTACTATTATTTCTATCCCTCTCTCTACCTCTATACTG
ACGCCTACGCACAGGACACCGGGCTATCAGGTGCTCAGTACTCCCACAGG
CGTAGCACCTCCTATCACCCCTATTATTATTGCCAAACATTCGAGGCTCA
GAGGACTGGTGGTAAGGGTGATAACTCCTTTGCGTCTGTTGTACAGCCAC
CAGGCCACCTTGACGCTGCTGACTATGCTGGGTCGTGCCCACAATACCTG
TCACTCTTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| xfSc0000465 | genome | xfSc0000465:48..5612 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76969_cuf0 |
| Biotype | protein_coding |
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