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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77215_cuf5 >transcript:BL77215_cuf5-protein ID=transcript:BL77215_cuf5-protein|Name=transcript:BL77215_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=121bp
CLSFEILRKVSPMEANLLKDPSFQVRVRFRFAGSDFPPEIVFKVFIHTGG
QGVNYVSGKRVIKPATNAAADSCRLMGHRKFYDQMIRDACQHEKDRVTDE
IDIITMKDYMQYLSNMDETPA Run BLAST on NCBI mRNA from alignment at Sc0000011:1253240..1254945- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77215_cuf5 ID=transcript:BL77215_cuf5|Name=transcript:BL77215_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=1706bp|location=Sequence derived from alignment at Sc0000011:1253240..1254945- (Branchiostoma lanceolatum)
TGCCTGTCGTTTGAGATCCTGAGGAAGGTGACAGACAGTCACAGAAATGC
CTTTAAGTACCAGAGTTATAAACCAAGGATTGATGTGTTCAAAAATTCGT
TTTTCCCGAGAACCATAGTAGAATGGAACTCGTTGTCATCAGATGCTGTA
GGAACACCTTCACTAAATAGCTTCAAAGAACGATTGCAGTCTGATGAGCA
AAAGTTAGGTGTGACAGGCCGTTCAGTGTAATATAACCAGCTGCTGCTGC
GCCGCGTGCCTGCGAAGCTGGTGTGTTACGCCGAAGGGCGGTTATACCGG
CTATACAGATACAGATACAGAAATGTCTGCTAGTCATTAACGCAATTGGT
TGTGTACAGAGAGCATTGTTGTCCGGAGCTGAGCAGTGTTTGACTTGTCG
CCCCCCTCCCCCTTACAGGAACACTGCCTGTCATTTGAGATCCTGAGGAA
GGTCAGTCCGATGGAGGCCAACCTACTGAAGGACCCCAGCTTCCAGGTCA
GGGTCAGGTTCAGGTCAGTACCCTGCAGTAACCTCTAGGTAACATAATAC
ATGGCAGCCATATTAGAGTGTGAGAGTTTATCTCAATCAAAATTACAGTT
TTTTCCGTAACTCTGAATTGAGGTTTGAAAACGATACCTGAGATGTGAAA
GCCAAAAAGAGCTGCATGGTCCTTTTGGATGGGGACATAAAGCTGGCAGC
CCTGTGTATAAGGGAGCTTATGGCGTCAAACCTCTGCATGTAAAAGAACC
CAAAGGAGTCCATGGGCCAGACCTAAAAATTTTACATATCAGTAACTATG
ATAACTATAACACATTTCACAGTTTTACGTCTGTTATGTTGATGCGAATG
TTCTGTGTTTCTCCCCAGATTTGCGGGCAGCGACTTCCCTCCTGAGATCG
TGTTTAAAGTCTTCATCCACACCGGAGGTCAGGGGGTCAACTACGTCAGC
GGGAAGAGGGTCATCAAACCCGCCACAAACGTAAGGAGTTCACTTGACCA
CACTGGACGCCTTAGAAATGTCTAAGATGAAACTGATATAATTCATGACC
CTAGTCATGTCCCTTTTCTCCTTTTTTGTGTGCATAGTCTTCACTTGATG
GGTCAAATACTCTAACTTTTACATTGAGTTTTGTAAGAAAAAAGTTTTTC
ATCAGATTTTCATTGCCAACATATTCTCATATTTTGCAGTTGTTCTGTGT
ACGAAGGACTTCATTTGTGGCAGCTTGTAAGTGCTGCATTGTACCGTGCC
TGCTCTTTTTATTGGATGGTCCACTATGATTTCTGTCGTTAACTCTTGTG
AACTCCAGGTAGATTAGTGTTTCTCTATGTAACACTAATGGAGATCTAAA
TAAAACAAACAAATAAATGAAGTTCAAGTTCATTAATAGTTCATGTGCCA
TTCCCCCAGGCGGCTGCGGACTCGTGTCGGCTGATGGGCCACCGCAAGTT
CTACGACCAGATGATCCGCGACGCCTGCCAGCACGAGAAGGATCGGGTTA
CGGACGAGATCGACATCATCACCATGAAGGACTACATGCAGTACCTCAGC
AACATGGACGAGACGCCAGCCTACATGGGCGGCAAGGAGAACCTGTGGAG
GAAACTGTCACTGGAAGGTGAGAGGCGGTTGCCTAGCAACACAGTATCTT
ACCAACCGTATTTTAGATCATGCAGTACCTCAGCAACATGGATGAAACGC
CCGCGT Coding sequence (CDS) from alignment at Sc0000011:1253240..1254945- >transcript:BL77215_cuf5 ID=transcript:BL77215_cuf5|Name=transcript:BL77215_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=1815bp|location=Sequence derived from alignment at Sc0000011:1253240..1254945- (Branchiostoma lanceolatum)
TGCCTGTCGTTTGAGATCCTGAGGAAGGTCAGTCCGATGGAGGCCAACCT
ACTGAAGGACCCCAGCTTCCAGGTCAGGGTCAGGTTCAGATTTGCGGGCA
GCGACTTCCCTCCTGAGATCGTGTTTAAAGTCTTCATCCACACCGGAGGT
CAGGGGGTCAACTACGTCAGCGGGAAGAGGGTCATCAAACCCGCCACAAA
CGCGGCTGCGGACTCGTGTCGGCTGATGGGCCACCGCAAGTTCTACGACC
AGATGATCCGCGACGCCTGCCAGCACGAGAAGGATCGGGTTACGGACGAG
ATCGACATCATCACCATGAAGGACTACATGCAGTACCTCAGCAACATGGA
TGAAACGCCCGCGTGCCTGTCGTTTGAGATCCTGAGGAAGGTCAGTCCGA
TGGAGGCCAACCTACTGAAGGACCCCAGCTTCCAGGTCAGGGTCAGGTTC
AGATTTGCGGGCAGCGACTTCCCTCCTGAGATCGTGTTTAAAGTCTTCAT
CCACACCGGAGGTCAGGGGGTCAACTACGTCAGCGGGAAGAGGGTCATCA
AACCCGCCACAAACGCGGCTGCGGACTCGTGTCGGCTGATGGGCCACCGC
AAGTTCTACGACCAGATGATCCGCGACGCCTGCCAGCACGAGAAGGATCG
GGTTACGGACGAGATCGACATCATCACCATGAAGGACTACATGCAGTACC
TCAGCAACATGGATGAAACGCCCGCGTGCCTGTCGTTTGAGATCCTGAGG
AAGGTCAGTCCGATGGAGGCCAACCTACTGAAGGACCCCAGCTTCCAGGT
CAGGGTCAGGTTCAGATTTGCGGGCAGCGACTTCCCTCCTGAGATCGTGT
TTAAAGTCTTCATCCACACCGGAGGTCAGGGGGTCAACTACGTCAGCGGG
AAGAGGGTCATCAAACCCGCCACAAACGCGGCTGCGGACTCGTGTCGGCT
GATGGGCCACCGCAAGTTCTACGACCAGATGATCCGCGACGCCTGCCAGC
ACGAGAAGGATCGGGTTACGGACGAGATCGACATCATCACCATGAAGGAC
TACATGCAGTACCTCAGCAACATGGATGAAACGCCCGCGTGCCTGTCGTT
TGAGATCCTGAGGAAGGTCAGTCCGATGGAGGCCAACCTACTGAAGGACC
CCAGCTTCCAGGTCAGGGTCAGGTTCAGATTTGCGGGCAGCGACTTCCCT
CCTGAGATCGTGTTTAAAGTCTTCATCCACACCGGAGGTCAGGGGGTCAA
CTACGTCAGCGGGAAGAGGGTCATCAAACCCGCCACAAACGCGGCTGCGG
ACTCGTGTCGGCTGATGGGCCACCGCAAGTTCTACGACCAGATGATCCGC
GACGCCTGCCAGCACGAGAAGGATCGGGTTACGGACGAGATCGACATCAT
CACCATGAAGGACTACATGCAGTACCTCAGCAACATGGATGAAACGCCCG
CGTGCCTGTCGTTTGAGATCCTGAGGAAGGTCAGTCCGATGGAGGCCAAC
CTACTGAAGGACCCCAGCTTCCAGGTCAGGGTCAGGTTCAGATTTGCGGG
CAGCGACTTCCCTCCTGAGATCGTGTTTAAAGTCTTCATCCACACCGGAG
GTCAGGGGGTCAACTACGTCAGCGGGAAGAGGGTCATCAAACCCGCCACA
AACGCGGCTGCGGACTCGTGTCGGCTGATGGGCCACCGCAAGTTCTACGA
CCAGATGATCCGCGACGCCTGCCAGCACGAGAAGGATCGGGTTACGGACG
AGATCGACATCATCACCATGAAGGACTACATGCAGTACCTCAGCAACATG
GATGAAACGCCCGCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000011 | genome | Sc0000011:1253240..1254945 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77215_cuf5 |
| Biotype | protein_coding |
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