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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78231_cuf0 >transcript:BL78231_cuf0-protein ID=transcript:BL78231_cuf0-protein|Name=transcript:BL78231_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=328bp
HTGEEPPMKVKKPYVCGRCNKEFTLLGSLKNHMHTHDEEERYKCEECGKC
FRLPCRFKYHMMTHTGEKLKTYTCKECGKQFSRSDSLNVHMRTHTGERPY
KCEICSKSFRGCGDLKRHMMIHTGEKPYSCGECSMKFTRPNYLKSHMQTH
TGEKPHQCKECNKTFHRACHLKRHMLTHSGEKPNRCEECGKTFSLPDALK
IHMRTHTGEKPYKCENYSRCFSVRSDLERHMLTHTGEKPYRCGECNMQFT
RPNHLKAHMQTHTGEKPFMETHAGEELTPETHTGEVPYMETHTDEKTDIQ
THTEEKPYQCGRCGEEFDQLGVLDKHVR Run BLAST on NCBI mRNA from alignment at Sc0000081:1167257..1168244- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78231_cuf0 ID=transcript:BL78231_cuf0|Name=transcript:BL78231_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=988bp|location=Sequence derived from alignment at Sc0000081:1167257..1168244- (Branchiostoma lanceolatum)
ATCACACTGGTGAGGAACCACCAATGAAAGTTAAGAAGCCCTATGTGTGT
GGCAGATGCAACAAGGAGTTTACTCTCTTGGGTTCTCTGAAAAACCACAT
GCACACCCACGATGAGGAAGAACGCTACAAGTGTGAGGAGTGTGGCAAGT
GCTTTCGCCTTCCGTGCCGCTTCAAGTATCACATGATGACTCACACAGGG
GAGAAACTCAAAACGTACACTTGTAAGGAGTGCGGCAAGCAGTTTAGCAG
GTCGGATAGCCTGAACGTCCACATGCGCACTCACACTGGTGAGAGACCCT
ACAAATGTGAGATTTGTAGTAAGTCCTTTAGAGGATGTGGTGATCTTAAG
AGACACATGATGATTCACACTGGTGAGAAACCCTACAGTTGTGGGGAGTG
CAGTATGAAGTTCACCCGACCCAACTATCTAAAATCCCACATGCAGACTC
ACACTGGAGAGAAACCGCACCAGTGTAAGGAGTGCAACAAGACCTTTCAC
CGTGCTTGCCATCTTAAAAGACACATGCTGACTCACTCAGGTGAGAAACC
CAACAGGTGTGAGGAGTGTGGCAAGACGTTTAGTTTACCAGATGCCCTAA
AGATCCACATGCGGACTCACACTGGAGAGAAACCCTACAAGTGCGAGAAC
TACAGCAGATGCTTTAGTGTACGCAGTGATCTGGAGAGACACATGCTAAC
TCACACTGGTGAGAAACCCTACAGGTGCGGGGAGTGCAACATGCAATTCA
CCAGACCCAATCATCTAAAGGCCCACATGCAAACTCACACAGGTGAGAAA
CCCTTCATGGAAACTCACGCTGGTGAAGAACTCACACCGGAAACTCACAC
AGGTGAGGTACCCTACATGGAAACTCACACTGATGAAAAAACAGACATTC
AAACTCACACAGAAGAGAAACCGTACCAATGCGGCAGATGCGGTGAGGAA
TTTGATCAACTGGGTGTTCTAGACAAGCATGTCCGCAG Coding sequence (CDS) from alignment at Sc0000081:1167257..1168244- >transcript:BL78231_cuf0 ID=transcript:BL78231_cuf0|Name=transcript:BL78231_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=984bp|location=Sequence derived from alignment at Sc0000081:1167257..1168244- (Branchiostoma lanceolatum)
CACACTGGTGAGGAACCACCAATGAAAGTTAAGAAGCCCTATGTGTGTGG
CAGATGCAACAAGGAGTTTACTCTCTTGGGTTCTCTGAAAAACCACATGC
ACACCCACGATGAGGAAGAACGCTACAAGTGTGAGGAGTGTGGCAAGTGC
TTTCGCCTTCCGTGCCGCTTCAAGTATCACATGATGACTCACACAGGGGA
GAAACTCAAAACGTACACTTGTAAGGAGTGCGGCAAGCAGTTTAGCAGGT
CGGATAGCCTGAACGTCCACATGCGCACTCACACTGGTGAGAGACCCTAC
AAATGTGAGATTTGTAGTAAGTCCTTTAGAGGATGTGGTGATCTTAAGAG
ACACATGATGATTCACACTGGTGAGAAACCCTACAGTTGTGGGGAGTGCA
GTATGAAGTTCACCCGACCCAACTATCTAAAATCCCACATGCAGACTCAC
ACTGGAGAGAAACCGCACCAGTGTAAGGAGTGCAACAAGACCTTTCACCG
TGCTTGCCATCTTAAAAGACACATGCTGACTCACTCAGGTGAGAAACCCA
ACAGGTGTGAGGAGTGTGGCAAGACGTTTAGTTTACCAGATGCCCTAAAG
ATCCACATGCGGACTCACACTGGAGAGAAACCCTACAAGTGCGAGAACTA
CAGCAGATGCTTTAGTGTACGCAGTGATCTGGAGAGACACATGCTAACTC
ACACTGGTGAGAAACCCTACAGGTGCGGGGAGTGCAACATGCAATTCACC
AGACCCAATCATCTAAAGGCCCACATGCAAACTCACACAGGTGAGAAACC
CTTCATGGAAACTCACGCTGGTGAAGAACTCACACCGGAAACTCACACAG
GTGAGGTACCCTACATGGAAACTCACACTGATGAAAAAACAGACATTCAA
ACTCACACAGAAGAGAAACCGTACCAATGCGGCAGATGCGGTGAGGAATT
TGATCAACTGGGTGTTCTAGACAAGCATGTCCGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000081 | genome | Sc0000081:1167257..1168244 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78231_cuf0 |
| Biotype | protein_coding |
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