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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80072_cuf0 >transcript:BL80072_cuf0-protein ID=transcript:BL80072_cuf0-protein|Name=transcript:BL80072_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=150bp
AVFAAANVMSRNVLDQLKIAKGPGEQRYVDFSEASFWNLVFLWAISMLSF
LNIIKFLHLVRFNPTISILAACIRQMSTEVMGFFAYFSIVFCAFAQLGRL
LLGTQLSEYRTFVETGKSLFTSVLGGFDFDGVRETRLGPIFLLAFLLCLL Run BLAST on NCBI mRNA from alignment at Sc0000078:395856..396749- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80072_cuf0 ID=transcript:BL80072_cuf0|Name=transcript:BL80072_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=894bp|location=Sequence derived from alignment at Sc0000078:395856..396749- (Branchiostoma lanceolatum)
GCTGTCTTTGCTGCGGCGAACGTTATGTCAAGGAATGTTCTGGACCAGTT
AAAAATCGCTAAAGGTAAAACATTCTCATTACAATGACAATGCCGGTACT
ATTGCCAAGTCTGTCAATAATGTGCATCCCTTTAGACGACTGTTAAGACA
ACTAAAAGGAGTGTAAATTTATTTTGTTTCTTTAGCACTTGTAAGACGGT
TTTGCATCGAATGAATTGCATCGAAAGTGACTGTACTGTGGCATTTGTTT
TCAGGGCCAGGGGAACAGCGCTATGTTGACTTCAGTGAAGCATCTTTCTG
GAACCTAGTGTTCCTGTGGGCAATTTCCATGCTCTCATTTCTCAACATCA
TAAAGTTCCTTCACCTGGTGCGTTTTAACCCAACCATCTCCATCCTGGCT
GCATGCATACGTCAAATGTCAACTGAAGTCATGGGCTTCTTCGCGTACTT
CTCCATCGTCTTCTGTGCCTTTGCACAGCTAGGTCGTCTACTGCTTGGCA
CCCAGCTGTCGGTATGTACACATTTGAGAACAGTGTTCATGTATGTATGT
GTGCATTACAATGTGCATTTACATTTGCAATTTTGCAACAAAATTTGAGC
TACTATAGGTCATCAATTCGGCCTACAATGTTTACCAAACTGTGTTTGTA
AGCTTAAAACGGTATGGCAGGAACCTTTTCTTGATACACATGCAGCTTCG
TGGTTTTCGGGATTTGTGTTTGTAAATGTTTTACATTTTTGTATGGCACT
TTTTGTGACACAGGAATACCGCACCTTTGTTGAAACGGGAAAAAGTCTGT
TTACATCAGTACTTGGGGGTTTCGACTTCGACGGGGTCAGAGAAACGAGA
CTTGGACCCATCTTTCTCCTGGCGTTTTTGCTTTGCCTGCTGCT Coding sequence (CDS) from alignment at Sc0000078:395856..396749- >transcript:BL80072_cuf0 ID=transcript:BL80072_cuf0|Name=transcript:BL80072_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1350bp|location=Sequence derived from alignment at Sc0000078:395856..396749- (Branchiostoma lanceolatum)
GCTGTCTTTGCTGCGGCGAACGTTATGTCAAGGAATGTTCTGGACCAGTT
AAAAATCGCTAAAGGGCCAGGGGAACAGCGCTATGTTGACTTCAGTGAAG
CATCTTTCTGGAACCTAGTGTTCCTGTGGGCAATTTCCATGCTCTCATTT
CTCAACATCATAAAGTTCCTTCACCTGGTGCGTTTTAACCCAACCATCTC
CATCCTGGCTGCATGCATACGTCAAATGTCAACTGAAGTCATGGGCTTCT
TCGCGTACTTCTCCATCGTCTTCTGTGCCTTTGCACAGCTAGGTCGTCTA
CTGCTTGGCACCCAGCTGTCGGAATACCGCACCTTTGTTGAAACGGGAAA
AAGTCTGTTTACATCAGTACTTGGGGGTTTCGACTTCGACGGGGTCAGAG
AAACGAGACTTGGACCCATCTTTCTCCTGGCGTTTTTGCTTTGCCTGCTG
GCTGTCTTTGCTGCGGCGAACGTTATGTCAAGGAATGTTCTGGACCAGTT
AAAAATCGCTAAAGGGCCAGGGGAACAGCGCTATGTTGACTTCAGTGAAG
CATCTTTCTGGAACCTAGTGTTCCTGTGGGCAATTTCCATGCTCTCATTT
CTCAACATCATAAAGTTCCTTCACCTGGTGCGTTTTAACCCAACCATCTC
CATCCTGGCTGCATGCATACGTCAAATGTCAACTGAAGTCATGGGCTTCT
TCGCGTACTTCTCCATCGTCTTCTGTGCCTTTGCACAGCTAGGTCGTCTA
CTGCTTGGCACCCAGCTGTCGGAATACCGCACCTTTGTTGAAACGGGAAA
AAGTCTGTTTACATCAGTACTTGGGGGTTTCGACTTCGACGGGGTCAGAG
AAACGAGACTTGGACCCATCTTTCTCCTGGCGTTTTTGCTTTGCCTGCTG
GCTGTCTTTGCTGCGGCGAACGTTATGTCAAGGAATGTTCTGGACCAGTT
AAAAATCGCTAAAGGGCCAGGGGAACAGCGCTATGTTGACTTCAGTGAAG
CATCTTTCTGGAACCTAGTGTTCCTGTGGGCAATTTCCATGCTCTCATTT
CTCAACATCATAAAGTTCCTTCACCTGGTGCGTTTTAACCCAACCATCTC
CATCCTGGCTGCATGCATACGTCAAATGTCAACTGAAGTCATGGGCTTCT
TCGCGTACTTCTCCATCGTCTTCTGTGCCTTTGCACAGCTAGGTCGTCTA
CTGCTTGGCACCCAGCTGTCGGAATACCGCACCTTTGTTGAAACGGGAAA
AAGTCTGTTTACATCAGTACTTGGGGGTTTCGACTTCGACGGGGTCAGAG
AAACGAGACTTGGACCCATCTTTCTCCTGGCGTTTTTGCTTTGCCTGCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:395856..396749 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80072_cuf0 |
| Biotype | protein_coding |
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