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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80220_cuf0 >transcript:BL80220_cuf0-protein ID=transcript:BL80220_cuf0-protein|Name=transcript:BL80220_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=375bp
MMYTHQNDSSDQCHICSKCSIALEKEKPIANAWTNNMDPGDIPSCLKQLT
RMETRLVSLKYTFLKLVILPGGQYGEQGQAIRFSTNIETSCNLLPRCQDT
SGIVLVHPSETDGSTQRNDPQYIVRYTHMHEALTWLMNNNDLYSDVNITC
FEDWNQASCEFYSTVANNGEIDQSNESSTVTELSSIPCNYTNPNVPLQSL
LQSATDTIPAISLPRETSAPQSIFKEKDLEEHCFPQLYPYGRNGFQETRD
IKMTDLQYFQSRLLNINDCWRKNMSWLFFALNSYEIKKLYSQISIVCRMQ
KQGNVTSQFSCQPLTAGDLRQNIDEDIECTSYTFMKNIRGTAAYFKDQLL
NLLAKINTIGPPTWFLTVSANDLNW Run BLAST on NCBI mRNA from alignment at Sc0000523:94510..96100+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80220_cuf0 ID=transcript:BL80220_cuf0|Name=transcript:BL80220_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1591bp|location=Sequence derived from alignment at Sc0000523:94510..96100+ (Branchiostoma lanceolatum)
AGAAACAAAGAGAAACAGCTAAGCAAAAGGCAGACAGACTTGCAAAGGAA
AGAAAGGGCAACAAAGCCAAGAAACAAAGAGAAACAGCTAAACAAAAGGC
AGACAGACTTGCAAAGCGAAGAGAGCGCAACAAAGCCAAGAAACAAAGCG
AAACAAATGAGCAAAAATTACAAAGGCATCAGAAAGAAAACTTACTGGAC
AAATCCAAAAGAGCAAATGAAAGTCCTCTGCAAAGAGCTAAACGCCTTAA
GAAGTGCCGTGACTACCAGAGGAATGCAGCTGCTTAGAAATATGTCAAAG
AACATAGCACAGATCACGCTGAGCAAACCAATGAAGTTTACAAAGCAGAG
TTCCCAGCATTCCATTGCTACATACAGCAGCAACCAAAACACTACTGCAT
TATATGTAGGAAATTCTTATTTCATGAGCAAGTGAGAACATGTCATATTC
CTATAACAGATGAAATGATGTACACGCATCAAAATGACAGCTCTGATCAA
TGTCATATATGTTCAAAGTGTTCCATTGCTCTTGAAAAAGAGAAACCAAT
AGCCAATGCTTGGACTAACAATATGGACCCAGGTGACATCCCATCATGTC
TTAAACAGCTCACTAGAATGGAAACAAGACTTGTCAGCCTTAAGTACACA
TTTTTAAAGCTGGTTATCCTACCAGGTGGACAATATGGTGAACAAGGCCA
AGCCATACGTTTCTCTACCAACATTGAAACTTCTTGCAATCTGTTGCCAC
GCTGTCAGGACACATCAGGAATTGTACTAGTACATCCCTCTGAGACTGAT
GGTAGTACACAAAGAAATGATCCCCAATACATTGTACGATATACTCACAT
GCATGAAGCACTCACATGGCTGATGAATAATAATGATCTTTACTCAGATG
TGAACATAACTTGTTTTGAAGATTGGAACCAAGCATCATGCGAATTCTAT
TCAACAGTTGCCAACAATGGTGAAATTGATCAATCAAATGAATCTTCTAC
TGTCACAGAGCTGTCTTCTATTCCTTGTAACTACACCAACCCAAATGTTC
CCTTACAATCTCTGTTACAGAGTGCAACAGACACTATACCAGCAATATCA
CTCCCTCGTGAAACATCAGCACCACAAAGTATTTTTAAGGAGAAAGACCT
TGAGGAGCACTGCTTCCCCCAGTTGTACCCATATGGTCGTAATGGCTTCC
AAGAGACAAGAGATATAAAGATGACAGACTTACAGTACTTCCAATCACGG
CTACTTAACATCAATGATTGCTGGAGAAAAAATATGTCTTGGCTCTTCTT
TGCTTTGAACTCATATGAAATCAAGAAACTGTACAGTCAGATATCCATTG
TATGTAGAATGCAGAAGCAAGGAAATGTAACCTCACAATTTTCTTGCCAA
CCTCTGACAGCAGGGGATCTGCGTCAAAATATTGATGAAGACATTGAATG
CACATCATACACTTTCATGAAGAATATCCGTGGAACAGCAGCATACTTTA
AGGACCAACTGCTTAACCTACTTGCAAAGATCAACACAATTGGCCCACCG
ACATGGTTCCTTACTGTCTCAGCAAATGATTTGAACTGGCC Coding sequence (CDS) from alignment at Sc0000523:94510..96100+ >transcript:BL80220_cuf0 ID=transcript:BL80220_cuf0|Name=transcript:BL80220_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1125bp|location=Sequence derived from alignment at Sc0000523:94510..96100+ (Branchiostoma lanceolatum)
ATGATGTACACGCATCAAAATGACAGCTCTGATCAATGTCATATATGTTC
AAAGTGTTCCATTGCTCTTGAAAAAGAGAAACCAATAGCCAATGCTTGGA
CTAACAATATGGACCCAGGTGACATCCCATCATGTCTTAAACAGCTCACT
AGAATGGAAACAAGACTTGTCAGCCTTAAGTACACATTTTTAAAGCTGGT
TATCCTACCAGGTGGACAATATGGTGAACAAGGCCAAGCCATACGTTTCT
CTACCAACATTGAAACTTCTTGCAATCTGTTGCCACGCTGTCAGGACACA
TCAGGAATTGTACTAGTACATCCCTCTGAGACTGATGGTAGTACACAAAG
AAATGATCCCCAATACATTGTACGATATACTCACATGCATGAAGCACTCA
CATGGCTGATGAATAATAATGATCTTTACTCAGATGTGAACATAACTTGT
TTTGAAGATTGGAACCAAGCATCATGCGAATTCTATTCAACAGTTGCCAA
CAATGGTGAAATTGATCAATCAAATGAATCTTCTACTGTCACAGAGCTGT
CTTCTATTCCTTGTAACTACACCAACCCAAATGTTCCCTTACAATCTCTG
TTACAGAGTGCAACAGACACTATACCAGCAATATCACTCCCTCGTGAAAC
ATCAGCACCACAAAGTATTTTTAAGGAGAAAGACCTTGAGGAGCACTGCT
TCCCCCAGTTGTACCCATATGGTCGTAATGGCTTCCAAGAGACAAGAGAT
ATAAAGATGACAGACTTACAGTACTTCCAATCACGGCTACTTAACATCAA
TGATTGCTGGAGAAAAAATATGTCTTGGCTCTTCTTTGCTTTGAACTCAT
ATGAAATCAAGAAACTGTACAGTCAGATATCCATTGTATGTAGAATGCAG
AAGCAAGGAAATGTAACCTCACAATTTTCTTGCCAACCTCTGACAGCAGG
GGATCTGCGTCAAAATATTGATGAAGACATTGAATGCACATCATACACTT
TCATGAAGAATATCCGTGGAACAGCAGCATACTTTAAGGACCAACTGCTT
AACCTACTTGCAAAGATCAACACAATTGGCCCACCGACATGGTTCCTTAC
TGTCTCAGCAAATGATTTGAACTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000523 | genome | Sc0000523:94510..96100 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80220_cuf0 |
| Biotype | protein_coding |
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