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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80998_cuf1 >transcript:BL80998_cuf1-protein ID=transcript:BL80998_cuf1-protein|Name=transcript:BL80998_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=242bp
MALTIRASATLRSLNLTRVFCTTVRARAPTFWSITQNQASVTFAWLFNKL
GRFSLKKRQSKPPHDYVVPVGNPILRGQALAVDHKNIKSEETQVVLDQLV
KVMRKKGAVGLSAPQVGVGLQIIVVECTRKQLDLVPQEIRKIREMQEFPL
KIFVNPKLKVTDYSTVVFPEGCESLPGYQANVPRYYGVNVTGLDREGMPV
AWQVTGWPARILQHEVEHLRGDLYIDIMDSRTFMDYSWERKK Run BLAST on NCBI mRNA from alignment at xfSc0000446:4438..5503- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80998_cuf1 ID=transcript:BL80998_cuf1|Name=transcript:BL80998_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1066bp|location=Sequence derived from alignment at xfSc0000446:4438..5503- (Branchiostoma lanceolatum)
GTTCAACAGAAGAGAAATGAAAATGTCAACCTCATGTGCACAAACGACTT
TGCAATCAGAGAAGCTACGTATTGCAGCTATAACGTGGTAAGGGGTCGGT
ATTAAGTATTTCAAGGGACATAACATTATGGCATTAACAATAAGAGCTTC
CGCAACTCTACGCTCGTTGAATTTGACTCGTGTTTTCTGTACCACTGTCC
GTGCACGTGCACCAACGTTCTGGAGTATCACCCAAAACCAGGCCTCTGTC
ACATTTGCGTGGCTTTTTAATAAACTTGGCCGCTTTTCACTGAAGAAGAG
ACAATCAAAACCGCCACACGACTATGTGGTACCTGTAGGTAATCCAATTT
TGCGTGGTCAGGCCTTAGCCGTTGATCACAAGAATATCAAATCTGAAGAA
ACCCAGGTAGTGCTGGACCAGTTGGTGAAGGTGATGAGAAAAAAGGGAGC
CGTTGGACTGAGTGCGCCTCAGGTAGGCGTTGGGCTACAGATCATAGTGG
TGGAGTGCACCAGGAAACAGTTGGACCTTGTGCCGCAGGAAATTAGGAAA
ATTCGAGAAATGCAGGAGTTCCCGCTGAAGATCTTCGTTAACCCCAAACT
GAAGGTGACTGACTACTCAACTGTAGTGTTCCCAGAGGGTTGTGAGAGTC
TGCCAGGATACCAGGCCAATGTGCCCAGGTACTATGGTGTAAATGTCACA
GGTGAGTGACGTGGATATCAATAACAAAGTCATAATTTCACATTTCTTTT
CATTAATTTTCTGCCCTAGTGATGTTGAGAAAAACTTTTTATATTAAAGT
TTAACATAATTTTTTTCCTTTTGCTCAGGTCTTGACCGAGAGGGGATGCC
TGTAGCATGGCAGGTGACAGGCTGGCCAGCCAGAATTCTGCAACACGAAG
TAGAACATCTACGGGGAGACCTGTATATCGACATCATGGACTCTAGGACA
TTCATGGACTATAGTTGGGAAAGGAAGAAATGATGATCTTTAAGCAAAAG
TTGTGAAGTGCTTTCTAAGTTGGGTGTGGGCTTGAATAAAGTTCTAAATG
GGAACCATGCGGCTAC Coding sequence (CDS) from alignment at xfSc0000446:4438..5503- >transcript:BL80998_cuf1 ID=transcript:BL80998_cuf1|Name=transcript:BL80998_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1458bp|location=Sequence derived from alignment at xfSc0000446:4438..5503- (Branchiostoma lanceolatum)
ATGGCATTAACAATAAGAGCTTCCGCAACTCTACGCTCGTTGAATTTGAC
TCGTGTTTTCTGTACCACTGTCCGTGCACGTGCACCAACGTTCTGGAGTA
TCACCCAAAACCAGGCCTCTGTCACATTTGCGTGGCTTTTTAATAAACTT
GGCCGCTTTTCACTGAAGAAGAGACAATCAAAACCGCCACACGACTATGT
GGTACCTGTAGGTAATCCAATTTTGCGTGGTCAGGCCTTAGCCGTTGATC
ACAAGAATATCAAATCTGAAGAAACCCAGGTAGTGCTGGACCAGTTGGTG
AAGGTGATGAGAAAAAAGGGAGCCGTTGGACTGAGTGCGCCTCAGGTAGG
CGTTGGGCTACAGATCATAGTGGTGGAGTGCACCAGGAAACAGTTGGACC
TTGTGCCGCAGGAAATTAGGAAAATTCGAGAAATGCAGGAGTTCCCGCTG
AAGATCTTCGTTAACCCCAAACTGAAGGTGACTGACTACTCAACTGTAGT
GTTCCCAGAGGGTTGTGAGAGTCTGCCAGGATACCAGGCCAATGTGCCCA
GGTACTATGGTGTAAATGTCACAGGTCTTGACCGAGAGGGGATGCCTGTA
GCATGGCAGGTGACAGGCTGGCCAGCCAGAATTCTGCAACACGAAGTAGA
ACATCTACGGGGAGACCTGTATATCGACATCATGGACTCTAGGACATTCA
TGGACTATAGTTGGGAAAGGAAGAAATGAATGGCATTAACAATAAGAGCT
TCCGCAACTCTACGCTCGTTGAATTTGACTCGTGTTTTCTGTACCACTGT
CCGTGCACGTGCACCAACGTTCTGGAGTATCACCCAAAACCAGGCCTCTG
TCACATTTGCGTGGCTTTTTAATAAACTTGGCCGCTTTTCACTGAAGAAG
AGACAATCAAAACCGCCACACGACTATGTGGTACCTGTAGGTAATCCAAT
TTTGCGTGGTCAGGCCTTAGCCGTTGATCACAAGAATATCAAATCTGAAG
AAACCCAGGTAGTGCTGGACCAGTTGGTGAAGGTGATGAGAAAAAAGGGA
GCCGTTGGACTGAGTGCGCCTCAGGTAGGCGTTGGGCTACAGATCATAGT
GGTGGAGTGCACCAGGAAACAGTTGGACCTTGTGCCGCAGGAAATTAGGA
AAATTCGAGAAATGCAGGAGTTCCCGCTGAAGATCTTCGTTAACCCCAAA
CTGAAGGTGACTGACTACTCAACTGTAGTGTTCCCAGAGGGTTGTGAGAG
TCTGCCAGGATACCAGGCCAATGTGCCCAGGTACTATGGTGTAAATGTCA
CAGGTCTTGACCGAGAGGGGATGCCTGTAGCATGGCAGGTGACAGGCTGG
CCAGCCAGAATTCTGCAACACGAAGTAGAACATCTACGGGGAGACCTGTA
TATCGACATCATGGACTCTAGGACATTCATGGACTATAGTTGGGAAAGGA
AGAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000446 | genome | xfSc0000446:4438..5503 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80998_cuf1 |
| Biotype | protein_coding |
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