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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81018_cuf0 >transcript:BL81018_cuf0-protein ID=transcript:BL81018_cuf0-protein|Name=transcript:BL81018_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=559bp
NYFNNYYIDKIKAHRTETDTELPTPTVTDLIDQHIMHDKECHLNFHTVSR
DDILKLLADIPMSATCGVDQMENKLMRLSSLHIAAPVCHIVNQSLITGCF
PSQWKAAKVRPLPKNSRMPLTGKNSRPISLLPVLSKVLERVVRDQILQYV
TINSIVSTAQHAYRPNHSTTTAMVKMTDDWLSAMDRGELVGVVYIDFSAA
FDLVDHSILLAKLKSYGFQPGVLSWFKSYLQDRTQLVYINGQFSEPLGLE
CGVPQGSCLGPLLFTLYTNDLPLAVSQCTTEMYADDTSLYKAAKSVSTIV
AALQPDLLKVVKWVRANRLVMNVLKTKCMLFGTARRLALLPDTSLNLVIG
SEKVEQVIESALLGLHMDPSLSWNLHIKHLMAKLSSNLAYVRRYACYLPD
TMCKVVVQALVLSILNYCSPVLASVPDSCTKKLQVIQNKACRLALRCSFD
TPIAKMHSELGWFSVRNRFDVSTLKLFFKIVMIGEPYEIYKALVPVHASH
SYSTRQSVHNYYLFKPKNNSGKRMFSYRSVMLWNALPSEFKIVSDVRHFK
KLVDQLYAT Run BLAST on NCBI mRNA from alignment at Sc0000038:882537..884405- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81018_cuf0 ID=transcript:BL81018_cuf0|Name=transcript:BL81018_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1869bp|location=Sequence derived from alignment at Sc0000038:882537..884405- (Branchiostoma lanceolatum)
TAACTACTTTAACAACTATTACATAGATAAGATCAAAGCCCATAGAACAG
AAACAGATACAGAGCTTCCAACTCCTACTGTAACGGATCTGATAGATCAA
CATATTATGCATGACAAGGAATGCCATCTGAATTTCCACACTGTTAGTAG
GGATGACATCCTGAAGCTGTTGGCCGACATTCCCATGTCAGCAACATGCG
GTGTGGACCAAATGGAAAACAAACTAATGAGATTGTCCTCTTTGCATATT
GCTGCACCTGTTTGCCACATTGTCAATCAGTCATTAATCACCGGCTGTTT
CCCCAGTCAATGGAAGGCAGCAAAAGTACGCCCCTTACCAAAAAACTCAA
GAATGCCGCTTACTGGAAAAAACAGCCGGCCAATTAGTCTCCTTCCAGTG
TTAAGCAAAGTGTTAGAAAGAGTAGTTCGTGATCAGATTTTGCAATATGT
AACCATTAACAGCATTGTGTCAACTGCACAACATGCCTATCGTCCTAATC
ATTCAACCACTACTGCAATGGTTAAGATGACAGATGACTGGCTGTCAGCT
ATGGATAGAGGGGAGCTTGTGGGTGTAGTGTACATAGATTTTAGTGCCGC
GTTTGACCTGGTTGACCACAGTATTCTGCTAGCCAAACTTAAATCTTACG
GTTTTCAACCAGGTGTTCTGTCATGGTTCAAAAGCTACTTACAAGATAGA
ACGCAACTTGTTTACATCAATGGTCAGTTTTCCGAGCCACTAGGGCTTGA
ATGTGGAGTGCCACAGGGCAGTTGTTTGGGTCCGTTATTGTTTACCCTTT
ATACAAATGATCTTCCGTTAGCTGTATCCCAATGCACGACTGAAATGTAT
GCCGATGATACGTCACTTTACAAGGCAGCCAAGTCAGTTAGTACTATTGT
GGCAGCTTTACAACCGGATCTTTTAAAGGTGGTAAAATGGGTCCGTGCAA
ATCGTTTAGTTATGAATGTTTTGAAAACAAAGTGTATGTTATTTGGTACT
GCACGCAGGCTTGCTCTTTTGCCAGACACTTCCCTGAACCTAGTTATTGG
TTCAGAGAAGGTTGAACAGGTAATTGAATCAGCCCTCCTGGGTTTGCATA
TGGACCCATCGCTTTCCTGGAACCTTCACATTAAACATCTCATGGCTAAG
CTATCATCAAACCTAGCCTATGTTAGAAGGTATGCCTGTTATCTACCTGA
TACAATGTGCAAGGTTGTTGTTCAAGCACTAGTGTTATCAATCTTGAACT
ATTGCTCACCTGTATTGGCTAGTGTACCAGATTCATGTACTAAGAAGTTA
CAAGTGATACAAAACAAAGCCTGCAGACTGGCCCTTAGATGTTCATTTGA
CACTCCAATCGCGAAAATGCACTCTGAACTTGGTTGGTTTTCAGTAAGAA
ATAGATTTGACGTCAGCACTCTTAAGTTATTCTTCAAGATTGTTATGATA
GGTGAGCCATATGAGATTTACAAAGCACTTGTACCAGTCCATGCATCGCA
CAGCTACTCTACTAGGCAATCAGTGCACAATTATTATCTTTTCAAACCTA
AGAACAACAGCGGAAAGAGAATGTTCAGCTACAGATCCGTAATGTTATGG
AATGCACTACCTAGCGAATTCAAGATCGTATCGGATGTTAGACACTTCAA
GAAATTGGTTGATCAATTGTATGCGACGTAATGGTTTTAACTTGATGATG
GATTGATAGTTTGATTTGTAAATAGTTAGCAATTGTAGAAATTTGCAGGT
ATGTTTTTATTGCAGTATGTAAATATGTAATTATGTGTGTATGTATGTAT
GTATTTTGTGATGTACATGTAGTGTTTATGAGCCCTGGAAGATTAGCCCC
CTAGAGGGGCTAAAGGGTA Coding sequence (CDS) from alignment at Sc0000038:882537..884405- >transcript:BL81018_cuf0 ID=transcript:BL81018_cuf0|Name=transcript:BL81018_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1680bp|location=Sequence derived from alignment at Sc0000038:882537..884405- (Branchiostoma lanceolatum)
AACTACTTTAACAACTATTACATAGATAAGATCAAAGCCCATAGAACAGA
AACAGATACAGAGCTTCCAACTCCTACTGTAACGGATCTGATAGATCAAC
ATATTATGCATGACAAGGAATGCCATCTGAATTTCCACACTGTTAGTAGG
GATGACATCCTGAAGCTGTTGGCCGACATTCCCATGTCAGCAACATGCGG
TGTGGACCAAATGGAAAACAAACTAATGAGATTGTCCTCTTTGCATATTG
CTGCACCTGTTTGCCACATTGTCAATCAGTCATTAATCACCGGCTGTTTC
CCCAGTCAATGGAAGGCAGCAAAAGTACGCCCCTTACCAAAAAACTCAAG
AATGCCGCTTACTGGAAAAAACAGCCGGCCAATTAGTCTCCTTCCAGTGT
TAAGCAAAGTGTTAGAAAGAGTAGTTCGTGATCAGATTTTGCAATATGTA
ACCATTAACAGCATTGTGTCAACTGCACAACATGCCTATCGTCCTAATCA
TTCAACCACTACTGCAATGGTTAAGATGACAGATGACTGGCTGTCAGCTA
TGGATAGAGGGGAGCTTGTGGGTGTAGTGTACATAGATTTTAGTGCCGCG
TTTGACCTGGTTGACCACAGTATTCTGCTAGCCAAACTTAAATCTTACGG
TTTTCAACCAGGTGTTCTGTCATGGTTCAAAAGCTACTTACAAGATAGAA
CGCAACTTGTTTACATCAATGGTCAGTTTTCCGAGCCACTAGGGCTTGAA
TGTGGAGTGCCACAGGGCAGTTGTTTGGGTCCGTTATTGTTTACCCTTTA
TACAAATGATCTTCCGTTAGCTGTATCCCAATGCACGACTGAAATGTATG
CCGATGATACGTCACTTTACAAGGCAGCCAAGTCAGTTAGTACTATTGTG
GCAGCTTTACAACCGGATCTTTTAAAGGTGGTAAAATGGGTCCGTGCAAA
TCGTTTAGTTATGAATGTTTTGAAAACAAAGTGTATGTTATTTGGTACTG
CACGCAGGCTTGCTCTTTTGCCAGACACTTCCCTGAACCTAGTTATTGGT
TCAGAGAAGGTTGAACAGGTAATTGAATCAGCCCTCCTGGGTTTGCATAT
GGACCCATCGCTTTCCTGGAACCTTCACATTAAACATCTCATGGCTAAGC
TATCATCAAACCTAGCCTATGTTAGAAGGTATGCCTGTTATCTACCTGAT
ACAATGTGCAAGGTTGTTGTTCAAGCACTAGTGTTATCAATCTTGAACTA
TTGCTCACCTGTATTGGCTAGTGTACCAGATTCATGTACTAAGAAGTTAC
AAGTGATACAAAACAAAGCCTGCAGACTGGCCCTTAGATGTTCATTTGAC
ACTCCAATCGCGAAAATGCACTCTGAACTTGGTTGGTTTTCAGTAAGAAA
TAGATTTGACGTCAGCACTCTTAAGTTATTCTTCAAGATTGTTATGATAG
GTGAGCCATATGAGATTTACAAAGCACTTGTACCAGTCCATGCATCGCAC
AGCTACTCTACTAGGCAATCAGTGCACAATTATTATCTTTTCAAACCTAA
GAACAACAGCGGAAAGAGAATGTTCAGCTACAGATCCGTAATGTTATGGA
ATGCACTACCTAGCGAATTCAAGATCGTATCGGATGTTAGACACTTCAAG
AAATTGGTTGATCAATTGTATGCGACGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000038 | genome | Sc0000038:882537..884405 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81018_cuf0 |
| Biotype | protein_coding |
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