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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82476_cuf0 >transcript:BL82476_cuf0-protein ID=transcript:BL82476_cuf0-protein|Name=transcript:BL82476_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=120bp
NNAVSEVQLKSLDGRWTVISTFTFQSDSTVTVAFSSYIPPHVHGTDNGKH
ENSRTVEVQMTVLSKDSMDPKEVTTMKDATAPDVITTALPVAVTLGAASF
VSFAWAEAWCTIGGMVLVLI Run BLAST on NCBI mRNA from alignment at xfSc0002232:266..2303- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82476_cuf0 ID=transcript:BL82476_cuf0|Name=transcript:BL82476_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2038bp|location=Sequence derived from alignment at xfSc0002232:266..2303- (Branchiostoma lanceolatum)
CAACAATGCAGTGTCTGAGGTTCAACTGAAGAGCCTGGATGGGCGCTGGA
CCGTCATCAGTACCTTCACATTCCAGAGTGACAGCACCGTGACGGTGGCT
TTCAGTTCGTACATCCCGCCACATGTGCATGGAACTGACAATGGCAAGCA
TGAGAACTCACGCACTGTGGAGGTTCAAATGACAGTTTTATCTAAAGGTA
AATTATGTCAGACCTAATATTATATTTGCCTGCTATCATATCATCACCAA
CGTAAGATTTTGAGTGGGTCAAAATAAAGACTCGAAATCTTTATGATATC
TGGTATTACACTCCAGGTGATTCCCAAGGAATTGCAGTTGCACTACCTCA
TAACTTCGCCAAAAATTATAGCCTCATCTTTTAACCATGGGAAGTAATTG
CACTAATGTGCATACTTTATGTGTGATAATGTGGCCTCAACGTAGGCTAA
GTGGCATATGTCACAAATTTGAAGTCTCCACCATTTCTCCACCATGTCAC
AACTAACATTTTTGTAAGGAAGACATATACCGGATATTTGTGTAGCACTC
GTCCTTTATTTTGCTTTCGCAAGATTCCATGGATCCAAAAGAAGTTACCA
CCATGAAAGACGCCACTGCTCCTGACGTCATAACTACAGCTTTGCCTGTT
GCCGTCACTCTTGGGGCAGGTAAGCAAGTAAAGCAAAGTGTCTTTATTCA
AACATACATATATATATATAAGTACATAGCACAACACATTTACAATTTCA
CAAATATACACAGGTACATATTGTTACATGGGCCATTCCCACTGGCTTTT
TTGGCTATGGTGTGCTCCTAGGACTTTTTTGACAGGGGTGTTCCATCCTC
CCTGGGTTCCTGGGCAGGGGTTTCTTCCATGTGGTTTAAATTTAAGACAT
ACAGCTTATCTGTTAAATCTTTAATCTTTGAGAATTACAAATACATTTAC
ATATGAAACATATTTATATATAAAAACATAAGACGCCTTACAAATAGAAA
TCAAAGTAACTACATTATCAAAATTATCAAAGCATTTACAAACAAACATC
AGAGGATTTACTCACATCTATATACAAATGCACAGTCACGCATCAATACA
AATACACAAATATCATAAGATAAGAAGCTTTACAAAAACAGTTAACTTCA
ACAAAAACCCATCAGAACATTCACAGAATCAAAAGTTAGAAATATCAAGA
ACAAAAAAAAAGAACGAGCATGACGGAACTCTCGCAGTGTGGAGGTTCAA
ATTATAGTTTTCTTTGGAGGAAGTATCGTAGTGCTATTCTATATCTCGTG
CACGCTTCAATGTCGTCTACCTTGTGTATCATTCAAAATCCCTTCTCATG
AGGAATGAAGATTCACCAAAGTATTCATCCTAGGCATATCTGTCTTGGGG
TAAGTTTTTGGTCAACAGAAGAGAATAAACTCGTAACAGCAAGTGATCAG
TAGATATCACGCATAGCTTAATTCATATGGAATTCGACAATGCGTACGTG
TACGTATTTCTCTTCCTTTTTCTAAATCGCACGTGTGCTATAAATTATTC
GCTTTTTTTGGCCAAACCGTCTTTAATTTGGTTTGCTGACTGCTTTAGCC
GCTTACGGGAAATCATAAGGGAACGACAATAGGTTTAATAGCCTGGCACA
ATTCTTCACCACAGACCTCTGTATAAATCAGTCACACGGCGTGAAACCGG
CGGAGCAAAAGTTACAGACCATGGCCACCATGTATTGTTCTTGTCAAAGA
GCTGATATTTCTTCCCACCGGGGTTAAACATTTGGCTCTGTCAGAGTCTG
TCTGAGAATGGAGTTTTGAACAAATCGGACGACATTGGGCAGCGTTGTAT
ACGTTGTCTTATAATGTTACGCGTTTAAGAATAGAATTCTCTCTGCCTGC
TTTTACATCTCCACCGAGGTAACATTTGGAGTGGATGATCACAATTATGT
TATTGATATTTCTCATTAGCCTCATTTGTCTCGTTTGCTTGGGCTGAGGC
TTGGTGTACCATCGGTGGAATGGTCCTGGTTCTGATTG Coding sequence (CDS) from alignment at xfSc0002232:266..2303- >transcript:BL82476_cuf0 ID=transcript:BL82476_cuf0|Name=transcript:BL82476_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1080bp|location=Sequence derived from alignment at xfSc0002232:266..2303- (Branchiostoma lanceolatum)
AACAATGCAGTGTCTGAGGTTCAACTGAAGAGCCTGGATGGGCGCTGGAC
CGTCATCAGTACCTTCACATTCCAGAGTGACAGCACCGTGACGGTGGCTT
TCAGTTCGTACATCCCGCCACATGTGCATGGAACTGACAATGGCAAGCAT
GAGAACTCACGCACTGTGGAGGTTCAAATGACAGTTTTATCTAAAGATTC
CATGGATCCAAAAGAAGTTACCACCATGAAAGACGCCACTGCTCCTGACG
TCATAACTACAGCTTTGCCTGTTGCCGTCACTCTTGGGGCAGCCTCATTT
GTCTCGTTTGCTTGGGCTGAGGCTTGGTGTACCATCGGTGGAATGGTCCT
GGTTCTGATTAACAATGCAGTGTCTGAGGTTCAACTGAAGAGCCTGGATG
GGCGCTGGACCGTCATCAGTACCTTCACATTCCAGAGTGACAGCACCGTG
ACGGTGGCTTTCAGTTCGTACATCCCGCCACATGTGCATGGAACTGACAA
TGGCAAGCATGAGAACTCACGCACTGTGGAGGTTCAAATGACAGTTTTAT
CTAAAGATTCCATGGATCCAAAAGAAGTTACCACCATGAAAGACGCCACT
GCTCCTGACGTCATAACTACAGCTTTGCCTGTTGCCGTCACTCTTGGGGC
AGCCTCATTTGTCTCGTTTGCTTGGGCTGAGGCTTGGTGTACCATCGGTG
GAATGGTCCTGGTTCTGATTAACAATGCAGTGTCTGAGGTTCAACTGAAG
AGCCTGGATGGGCGCTGGACCGTCATCAGTACCTTCACATTCCAGAGTGA
CAGCACCGTGACGGTGGCTTTCAGTTCGTACATCCCGCCACATGTGCATG
GAACTGACAATGGCAAGCATGAGAACTCACGCACTGTGGAGGTTCAAATG
ACAGTTTTATCTAAAGATTCCATGGATCCAAAAGAAGTTACCACCATGAA
AGACGCCACTGCTCCTGACGTCATAACTACAGCTTTGCCTGTTGCCGTCA
CTCTTGGGGCAGCCTCATTTGTCTCGTTTGCTTGGGCTGAGGCTTGGTGT
ACCATCGGTGGAATGGTCCTGGTTCTGATT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0002232 | genome | xfSc0002232:266..2303 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82476_cuf0 |
| Biotype | protein_coding |
|
