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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82926_cuf0 >transcript:BL82926_cuf0-protein ID=transcript:BL82926_cuf0-protein|Name=transcript:BL82926_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=234bp
MGMIFNCHTHSCCSLLKEASNVVLAEGSPSSSEVSGSSKQPTSPDFIVPE
SPIEQDSLELGTELSPEAMVFRTSTPLKAKRTYNLRKASKTRASGTRQQP
ARQRNQQSNRDMDAPPPKRHRAKNRNTEDESWETRSSYRKKTGNTRTLRT
RRKNSFKSVTPCSVVMPRLSEEDIQSLSRNKSTRRKQQSGNVRKLEKNAK
ERISNKKTTSVQQRKKRSTYDCFKTPKTSAFRYV Run BLAST on NCBI mRNA from alignment at Sc0001583:2047..5007- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82926_cuf0 ID=transcript:BL82926_cuf0|Name=transcript:BL82926_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2961bp|location=Sequence derived from alignment at Sc0001583:2047..5007- (Branchiostoma lanceolatum)
ACATTCTACAGATACCATATTGGAAGTGTAGGTGCCTTTAGAAAAAGTAA
ATACACAGACTATTTTTTTTTAAATAATTTTTTTAATTCTTGCCCTGTCG
CTCCAATTTTCTTCTTAAAAAAATCCGAGAATCAACAAATAAAACTGGTG
TGGTCTCAACATTTTTTCAACAGGACTCTTTTAGAGTACCCACTTAATAC
ACAAACAAGATCAAGACCATATAGAACTGTAAAGGTTACTTTTTTTCTAC
AACAGTTACATTTATGTGATGAGCTACTGTCTTTTTATCCCATGTTTTTA
GCGAAGCTTCAGGAGCGAGCTTAATAGTATATTTTACGCCCGTTTTACAA
GAATTCCTAGAATTATACGGGAATCCGTCCACGCAAACTCTGTGGACACC
CGCCTGTCACTCTATACCTTGTTAGCGGTCTGGCATCCCGGCGCAGCAGA
TGACAGATGACCTACTTACGTAGTGTCCGATTTCGTACTAGTGGGAGCGT
GTCAGGGAGTTATCGGACACCGAATCTAGTGTTCTAGCTTTGAAAAGGGT
TTTCAACCCACCCCAGTTGATCTATTATCACAAGAACTTGTTGAACACCA
TGCCTCCCTCTAAAAAACCTCTGTGGACACCAAAACTGGAGGAGCTCCAA
GCATATATAGAAAGGTTTTTTAACAGAACGATAAAGAACTTGGTTACCGC
TTGGCAGTCTACACTGAACGCTTGACGTGGAGGGGTGCGGTGTCGGAAAA
ACAACAGTAACTCCTCGAAAACACCACGTACAGAGCCAGAATAACAACCA
AAACGATCCTTTGGAGCCCCAGCAAAACGAATTTCTAAACTTTTGGCCTA
GATTCTCACTCCACCTATCCAAAAATGACAGAGAAAGGACACTACACAGG
GAGTGTGCTCCCGCCTTTCGATATCTGTTCTGAATTCCTTGAGTAACCTA
TGGTGCCTTTCTATATCTGCTTGTTATTGGGTAGGCCTACTACTCTCTCT
TCGCAGCCAGGGGCCTCCATTTAACTCCATGTAAAGTGCCGTTCCTAAGC
GCAAGGGCGCAACGTCAACGGGACAAATCAGGAACCCTAGATTCAAACTC
AGTTCATGTACCTCTGGCTTGGCAGACGCCTTACTGATTTCTTAGTGTTT
TTTTAACAAATATTATGGCAGAACTAAGAGTGCTACGTTGATACTTTATT
TACAGTGAAGTAAGATCAACCCAGACACCTTCGCTATGGGAATGATTTTC
AATTGCCACACTCATTCTTGTTGTTCCCTTCTTAAGGAGGCCAGTAATGT
TGTGCTGGCCGAAGGGTCCCCAAGTTCTTCTGAGGTATCTGGAAGTTCCA
AGCAGCCAACTTCTCCAGACTTTATTGTTCCCGAGTCCCCAATAGAACAG
GTAAAGAAAGATGGAATCTCCAAACAAATCTATCAGTGGCAAGGCAGTAT
CGGAAGGGCCAACCAGTATCTAAAAGGCCACCGGAGGTCTATTGGATACT
GGTTGGCCCTTCGGGTTCTTAGTTCTTAGAACATGTTTCAATATCAATAG
AAATGGTGTGATCCCATTGATGTAAGCAGTTTCTGTGGTTAAACTTGTCC
ATTCTTTAACCTAGCTAAATACAGTAAATGCATTTAGGTTTGCGGTGATT
TAATTTTACGGCAGAGAGAAAATGGAGTGATCTCAGTGGTTTTTAGTTCG
CTGTGAAACAAGCTTAAGGTGGTAGGCTGACAGGGGACAGAACAAACATT
TTTGCTGTTAACACGACCACTGCAAACTTAAATGGAATTAAAAGTAGTTG
TCATACTCATAGTTTTACTTTTTTGATCCCGCAGGATTCCTTGGAGCTGG
GTACAGAATTGTCCCCAGAGGCTATGGTTTTCAGAACAAGCACTCCCTTA
AAGGCAAAACGCACTTACAACCTTAGGAAAGCAAGCAAAACAAGAGCTTC
TGGGACAAGACAACAGCCAGCTCGTCAGAGAAACCAGCAATCCAACCGAG
ACATGGACGCTCCACCTCCCAAGCGGCATAGAGCAAAGAACAGAAACACT
GAGGACGAAAGTTGGGAAACCAGGAGTTCCTACAGAAAGAAGACCGGTAA
CACCAGGACATTGAGGACAAGACGAAAGAACAGTTTCAAGTCTGTGACGC
CGTGTTCGGTCGTGATGCCCAGGCTTAGCGAAGAAGACATACAGAGTTTG
TCTAGGAATAAGTCAACCAGACGGAAACAACAGTCAGGCAATGTCAGGAA
GCTTGAGAAGAATGCAAAGGAACGCATCAGTAACAAGAAAACGACGTCAG
TGCAGCAGAGAAAGAAACGTTCAACATATGATTGCTTCAAAACACCCAAA
ACATCTGCTTTTCGGTATGTCTAATATAGATCATACCAACTTAGTTACAG
GCAAGCGCAAAGTCGCTGGGTACAAGGGGCTTGAAATACCTTTAAAACTA
AAGGCAGGTTGCCTGAAATCTAGATTGCCCATTAACAAATAAGCAATCAG
GGATTTGGAAGAGAAATCTTGTGTGCCCAGTTTAATCAAGGCAACAAACA
ATGGATCTTGAATGGATCTTGCCCAAATTCATTGCGTCCATGCTTGGATT
GCATGATGCTTGCATTGTGCTGTCGACCTTCCATATCCTGAAAAATGGCC
ATATTTCATCATTGCCACAAAAATGCACAAGAAGAAACTGATTTTGCCAA
GAAAACGACCAAAAATCCACAAAAATGATACCATGTAGTGAGGTTAAAAC
ATCATTATCTTTAGAAATTGCTGATCAAATGGCTAGTTACAAGTTAGCTC
AATCGGTTACGTCGTAGGACTGCGCTTTTGGTATGAGTCCCCGGTTCGAT
ACCGAGTGTGGACATCTTTCTTTTTTTCTTTTTAAACAGCCATTTAATAT
TTAGAACGCCTTTGTCTTATGAACAGAACTTCATAGATTCCAAACTCGGC
TTTTGAAAANN Coding sequence (CDS) from alignment at Sc0001583:2047..5007- >transcript:BL82926_cuf0 ID=transcript:BL82926_cuf0|Name=transcript:BL82926_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1410bp|location=Sequence derived from alignment at Sc0001583:2047..5007- (Branchiostoma lanceolatum)
ATGGGAATGATTTTCAATTGCCACACTCATTCTTGTTGTTCCCTTCTTAA
GGAGGCCAGTAATGTTGTGCTGGCCGAAGGGTCCCCAAGTTCTTCTGAGG
TATCTGGAAGTTCCAAGCAGCCAACTTCTCCAGACTTTATTGTTCCCGAG
TCCCCAATAGAACAGGATTCCTTGGAGCTGGGTACAGAATTGTCCCCAGA
GGCTATGGTTTTCAGAACAAGCACTCCCTTAAAGGCAAAACGCACTTACA
ACCTTAGGAAAGCAAGCAAAACAAGAGCTTCTGGGACAAGACAACAGCCA
GCTCGTCAGAGAAACCAGCAATCCAACCGAGACATGGACGCTCCACCTCC
CAAGCGGCATAGAGCAAAGAACAGAAACACTGAGGACGAAAGTTGGGAAA
CCAGGAGTTCCTACAGAAAGAAGACCGGTAACACCAGGACATTGAGGACA
AGACGAAAGAACAGTTTCAAGTCTGTGACGCCGTGTTCGGTCGTGATGCC
CAGGCTTAGCGAAGAAGACATACAGAGTTTGTCTAGGAATAAGTCAACCA
GACGGAAACAACAGTCAGGCAATGTCAGGAAGCTTGAGAAGAATGCAAAG
GAACGCATCAGTAACAAGAAAACGACGTCAGTGCAGCAGAGAAAGAAACG
TTCAACATATGATTGCTTCAAAACACCCAAAACATCTGCTTTTCGGTATG
TCTAAATGGGAATGATTTTCAATTGCCACACTCATTCTTGTTGTTCCCTT
CTTAAGGAGGCCAGTAATGTTGTGCTGGCCGAAGGGTCCCCAAGTTCTTC
TGAGGTATCTGGAAGTTCCAAGCAGCCAACTTCTCCAGACTTTATTGTTC
CCGAGTCCCCAATAGAACAGGATTCCTTGGAGCTGGGTACAGAATTGTCC
CCAGAGGCTATGGTTTTCAGAACAAGCACTCCCTTAAAGGCAAAACGCAC
TTACAACCTTAGGAAAGCAAGCAAAACAAGAGCTTCTGGGACAAGACAAC
AGCCAGCTCGTCAGAGAAACCAGCAATCCAACCGAGACATGGACGCTCCA
CCTCCCAAGCGGCATAGAGCAAAGAACAGAAACACTGAGGACGAAAGTTG
GGAAACCAGGAGTTCCTACAGAAAGAAGACCGGTAACACCAGGACATTGA
GGACAAGACGAAAGAACAGTTTCAAGTCTGTGACGCCGTGTTCGGTCGTG
ATGCCCAGGCTTAGCGAAGAAGACATACAGAGTTTGTCTAGGAATAAGTC
AACCAGACGGAAACAACAGTCAGGCAATGTCAGGAAGCTTGAGAAGAATG
CAAAGGAACGCATCAGTAACAAGAAAACGACGTCAGTGCAGCAGAGAAAG
AAACGTTCAACATATGATTGCTTCAAAACACCCAAAACATCTGCTTTTCG
GTATGTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001583 | genome | Sc0001583:2047..5007 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82926_cuf0 |
| Biotype | protein_coding |
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