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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84831_cuf0 >transcript:BL84831_cuf0-protein ID=transcript:BL84831_cuf0-protein|Name=transcript:BL84831_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=532bp
MDEPRRWLPVGESRPGNQNNSREDQTRDMCGYKEDKSTGLPANVGKHTST
SEKPLKCDQCGYSAAKKSALDLHMLEHRGQEPNMCIECGYRTAYKKDLAV
HMRTHTGEKPYKCDQCDYSCTQKSGLDRHVMTQHTDERPYMCEECGYRTG
DRSTLATHRKKHAGGKPHKCNECDYATLWKNALDMHMARHTGEKPYMCEK
CGYRTAYPSNLSVHMRKHTGETPHKCSLCDYATARKDYLVLHIRKHTGEK
PFMCEKCGYRTADKTCLTQHVKTHTGEKPYKCDQCDYSSAQKGHLDRHMA
KHTGEKPHVCWECGFRTADKSSLPKHMRTHTGEKPYKCDQCDYSATQKNQ
LNRHMAKHTGEKPYACGDCDYRTADKSNLARHVKHHMAEKPFKCDQCDYS
TVRQKTFEIHMARHTGEKPYKCEECGFRMADGSSLVKHMRTHTREKPYKC
DQCDYAATQKSQLNRHMVQHTGEKPYACGECNHRTADKSGLAQHLKQHKN
EKAFKCDHCSYSTARKKILIRHMATKHTLINK Run BLAST on NCBI mRNA from alignment at Sc0000004:4870868..4874432- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84831_cuf0 ID=transcript:BL84831_cuf0|Name=transcript:BL84831_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3565bp|location=Sequence derived from alignment at Sc0000004:4870868..4874432- (Branchiostoma lanceolatum)
ACAGGACTTGGAACTGGGTAATCAGGTACAGTGAATCTGTGTTGTGACCT
CTGACCTTTTATTCAATTTGACCGCCATTTTGACTTTTGTTTGGAGCATC
TTCTTTCTCGATTTTACCGTGATTGGCAGGCTTCTCCGTCTCGTATCAGT
CCGGAACCCTCATTAACAAACAGGTAAGATATTTTTCTACGGTCAAAGTT
TGCTTTAGAGTGGTATGTCACAGCTACCGTTGTATTTTGGTGAGAAGCCA
CTGCACACCCTAATTTCTTGTGGGAGGGGGGTGGATAGAAATATTTACTA
CTTCATGACATCATTTCCCCGTCACAAATTAGTCACAAAACAGAGTTGTA
AGACCTCTGCCTACTGTCGAAGTTTATTATAGAGTTGTACGTACTTTAAA
ACTAGGTTTGTATTTTGGTGAGAAGCCACACAACGTAAATTATTTATGGA
GGCGAGCATGAATGCCGTAAGTTTATCGTAAGAGTACTTACTGAAATATA
AACACACTCCTTGAGGCACAACAGCAAAATAGACTAGCAGCTGTAGAACC
ATTGCTGATCAAAAGTCTGATAGATATATCTGTTGTTCTTGCCCCTGTTT
TGTGTCTATTTCTTCACTAGATGTGGTCACAAGGTGCTGTATAAAACTAT
AATATTGATGGCTGCTTCTTCAGTTCTTGGTTGTCATGCTATGTCTGTTG
CTTTACATCTGGTGCTCTGCTCATGCATATTTTGAATGTGTTTATCTAAT
AGTACTCCTTGTTAAATCTTGCTGTGGCTTCTACATATATCTGTAATTAC
ACAAGCAGTAAATATTACTACTACTAGTAAGTGATGATAAACTGTTGTTA
ACTAGTTGTTGTTGTCTCTATTACACCGCTGTCTCGTCAGTCTATGGTCA
CTTGTGCTTTTCCTCTTCCTACTCATGTGCTGCATTTTATCTGATAGACT
TGTGAACCGTAGAGGACACTCTTCACAGCTAAAATTACGTATACCATGGG
CATCTCAGTAAAAAAAACATTCATTCAAAACTGATGTGTGACAGTTTCAC
CATTGTGAGTGTAAATACATGTAAAGTGTGCCATAGACAAATAAAATAAG
AGGGAGGGTGGGAGGGTAAAAAAGAAGACAGTAGATTAGAAAAAAACTGT
TTTTTCATTATATTAATTATTTTCTGCATTCCTCAGACAGGTGTAGAAAT
GGACGAGCCGAGACGCTGGCTTCCCGTTGGAGAATCACGTCCTGGAAACC
AGAATAACAGCAGAGAGGACCAGACAAGAGACATGTGTGGGTATAAGGAA
GACAAAAGCACAGGCCTGCCTGCTAATGTTGGAAAACATACTAGTACTAG
TGAGAAACCCCTCAAATGTGACCAGTGTGGCTATTCTGCAGCAAAGAAAT
CTGCTCTAGACCTGCACATGTTGGAACACAGGGGTCAGGAACCTAACATG
TGCATAGAGTGTGGGTACAGGACGGCCTATAAAAAGGACCTAGCCGTACA
CATGAGAACGCATACAGGAGAAAAACCCTACAAGTGTGACCAGTGCGACT
ATTCTTGTACTCAAAAATCTGGTTTAGACCGACACGTCATGACCCAACAC
ACGGATGAGAGGCCCTACATGTGCGAGGAGTGCGGATACAGAACTGGTGA
TAGGTCTACTCTTGCCACACACAGGAAAAAACATGCAGGGGGAAAGCCTC
ACAAGTGTAATGAATGTGACTATGCAACTCTATGGAAAAATGCTCTGGAC
ATGCACATGGCCAGACACACTGGGGAGAAACCATACATGTGTGAAAAATG
TGGATACAGGACAGCGTATCCTTCTAACCTCTCTGTGCACATGAGAAAAC
ATACAGGTGAAACGCCCCACAAATGTAGCCTGTGTGACTATGCTACAGCA
CGGAAAGACTATCTGGTCCTACACATAAGGAAACACACTGGTGAGAAACC
TTTCATGTGTGAGAAGTGTGGATACAGGACAGCTGACAAAACTTGCCTCA
CCCAGCATGTTAAAACTCACACTGGTGAGAAACCCTACAAATGTGACCAG
TGCGACTATTCTTCTGCACAGAAAGGCCACTTAGATCGACACATGGCTAA
ACACACCGGTGAGAAACCCCACGTGTGTTGGGAGTGCGGATTCAGGACTG
CCGATAAGTCTTCCCTACCCAAACACATGAGAACCCACACAGGAGAAAAA
CCCTACAAATGTGACCAGTGTGACTATTCCGCTACACAGAAAAACCAATT
AAACCGACACATGGCCAAACACACTGGTGAGAAACCTTACGCATGTGGAG
ACTGTGACTATAGGACAGCTGACAAGTCCAACCTAGCTCGCCATGTGAAA
CACCACATGGCTGAAAAACCATTCAAATGTGACCAGTGCGACTATTCTAC
TGTGCGACAGAAAACTTTCGAAATACACATGGCTAGACACACTGGAGAGA
AACCTTATAAGTGCGAGGAGTGTGGATTCAGGATGGCTGATGGGTCTTCC
CTAGTCAAACACATGAGAACCCACACAAGAGAAAAACCCTACAAATGTGA
CCAGTGTGACTATGCTGCTACACAGAAAAGCCAATTAAACCGACACATGG
TCCAACACACTGGTGAGAAACCTTACGCATGTGGAGAGTGCAACCACAGG
ACAGCTGACAAGTCTGGCCTAGCTCAACATCTGAAACAACATAAGAATGA
AAAAGCTTTCAAGTGTGACCACTGCAGCTATTCCACTGCGCGGAAAAAAA
TACTAATCCGACACATGGCTACGAAACACACACTTATTAATAAGTAACAG
GCTCAGTGGAAGTGTATATGAACAAAATAAGAAACTGCCCAGTGCCACCT
ACTTTAAAAATATCCAGCCAAACATGTCTCCATCACTTTGACGCCAGCAA
TGTTTTATTCAAGGTCATCAAATGGTGTCGAATGGTGGAGGGCAGGAAGT
AGCTACCTAAATGAACTTTGCCATCTGACTAGTGAGATTGGACTATGAAT
CATAGTATGATTTATGGACACCGATTCTGTTTTGAACTGAATAATTATGT
ACTTTCTTTAGCAGTATACATGTAGTGTTTGTATGTTCACCGTGACTATA
GAAAGACATGGGTGCGATTCCCATTTTGATTGATGTTGCAGCGTTGCAAA
TGAGCTGTAAGTTAGTTGCTTATTTCAGTGGTTGTTCAGGCACCAGACAT
ATACAGTCATGAGAACAGATGTAGCTGATAGATTCGTATCCAGTATAAAC
AAGGTTCTTCTTGTGAATATGCCGTACAAACTTGATTCTATTGATGGCTT
TGCAATTGAGTGCTTGTGTGTTTGATAATGTATGTCTTGTAGAGCTGAAG
CAAAAAATTAACGCGCATGTTTTTATGTAACCTTAGTTCTTATTAAGAAT
TTATGTTTAGAAAAGGGGGCTAAAATTTTTTCTAGAATTTCTTGATGTTC
TGGAGACATTAAGTGTGAGGAAGATGTATATTTAAAAGGCAATAAGAGAC
ATTGTCTTTTCTAGAGAAGTATTATGTGTTGAGAACATATTGTTAAATGA
AGATCTGATAGTGAC Coding sequence (CDS) from alignment at Sc0000004:4870868..4874432- >transcript:BL84831_cuf0 ID=transcript:BL84831_cuf0|Name=transcript:BL84831_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1599bp|location=Sequence derived from alignment at Sc0000004:4870868..4874432- (Branchiostoma lanceolatum)
ATGGACGAGCCGAGACGCTGGCTTCCCGTTGGAGAATCACGTCCTGGAAA
CCAGAATAACAGCAGAGAGGACCAGACAAGAGACATGTGTGGGTATAAGG
AAGACAAAAGCACAGGCCTGCCTGCTAATGTTGGAAAACATACTAGTACT
AGTGAGAAACCCCTCAAATGTGACCAGTGTGGCTATTCTGCAGCAAAGAA
ATCTGCTCTAGACCTGCACATGTTGGAACACAGGGGTCAGGAACCTAACA
TGTGCATAGAGTGTGGGTACAGGACGGCCTATAAAAAGGACCTAGCCGTA
CACATGAGAACGCATACAGGAGAAAAACCCTACAAGTGTGACCAGTGCGA
CTATTCTTGTACTCAAAAATCTGGTTTAGACCGACACGTCATGACCCAAC
ACACGGATGAGAGGCCCTACATGTGCGAGGAGTGCGGATACAGAACTGGT
GATAGGTCTACTCTTGCCACACACAGGAAAAAACATGCAGGGGGAAAGCC
TCACAAGTGTAATGAATGTGACTATGCAACTCTATGGAAAAATGCTCTGG
ACATGCACATGGCCAGACACACTGGGGAGAAACCATACATGTGTGAAAAA
TGTGGATACAGGACAGCGTATCCTTCTAACCTCTCTGTGCACATGAGAAA
ACATACAGGTGAAACGCCCCACAAATGTAGCCTGTGTGACTATGCTACAG
CACGGAAAGACTATCTGGTCCTACACATAAGGAAACACACTGGTGAGAAA
CCTTTCATGTGTGAGAAGTGTGGATACAGGACAGCTGACAAAACTTGCCT
CACCCAGCATGTTAAAACTCACACTGGTGAGAAACCCTACAAATGTGACC
AGTGCGACTATTCTTCTGCACAGAAAGGCCACTTAGATCGACACATGGCT
AAACACACCGGTGAGAAACCCCACGTGTGTTGGGAGTGCGGATTCAGGAC
TGCCGATAAGTCTTCCCTACCCAAACACATGAGAACCCACACAGGAGAAA
AACCCTACAAATGTGACCAGTGTGACTATTCCGCTACACAGAAAAACCAA
TTAAACCGACACATGGCCAAACACACTGGTGAGAAACCTTACGCATGTGG
AGACTGTGACTATAGGACAGCTGACAAGTCCAACCTAGCTCGCCATGTGA
AACACCACATGGCTGAAAAACCATTCAAATGTGACCAGTGCGACTATTCT
ACTGTGCGACAGAAAACTTTCGAAATACACATGGCTAGACACACTGGAGA
GAAACCTTATAAGTGCGAGGAGTGTGGATTCAGGATGGCTGATGGGTCTT
CCCTAGTCAAACACATGAGAACCCACACAAGAGAAAAACCCTACAAATGT
GACCAGTGTGACTATGCTGCTACACAGAAAAGCCAATTAAACCGACACAT
GGTCCAACACACTGGTGAGAAACCTTACGCATGTGGAGAGTGCAACCACA
GGACAGCTGACAAGTCTGGCCTAGCTCAACATCTGAAACAACATAAGAAT
GAAAAAGCTTTCAAGTGTGACCACTGCAGCTATTCCACTGCGCGGAAAAA
AATACTAATCCGACACATGGCTACGAAACACACACTTATTAATAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000004 | genome | Sc0000004:4870868..4874432 - |
Properties
| Property Name | Value |
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| Transcript id | BL84831_cuf0 |
| Biotype | protein_coding |
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