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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86446_cuf0 >transcript:BL86446_cuf0-protein ID=transcript:BL86446_cuf0-protein|Name=transcript:BL86446_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=107bp
KKVVRRAGSVSFAWSTNRKNSVRKMSFFNHLLAVFGTLLVTTGTTWDSFR
DPNIVRPPGLDKAGFNVLVGCSVCVGLVIIAVMVAICYHVYIKPRRREFH
LTETTEL Run BLAST on NCBI mRNA from alignment at Sc0000045:1159100..1161918- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86446_cuf0 ID=transcript:BL86446_cuf0|Name=transcript:BL86446_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2819bp|location=Sequence derived from alignment at Sc0000045:1159100..1161918- (Branchiostoma lanceolatum)
CAAAAAAGTCGTCAGACGAGCCGGATCAGTCTCTTTTGCCTGGTCAACAA
ACAGGAAGAACTCTGTGAGGAAAATGTCGTTTTTTAACCATCTGTTGGCT
GTGTTCGGGACGCTTCTGGTGACGACTGGGACAACATGGGGTGAAGGTAA
GGAAACTTGGTCGTTCTCGGGTTAAACTAGTTTCGTAAAAAAGGAGAAGC
AAAGAGATGTACAAGGAAGGCTCATTAAAAAATCACCTGACCAATTATAA
CTATTGTTAGAAACTGAAACTAAACATGTATAAAACTGCATATATACCTA
TTAGCCACATTGTTTTTGTTTTGTTTTTCTATACTAAAATCCAATCAGTT
TCTTTTTTCGTTGTTGAATGAATGAATATAACTTTATCGTTCGACAATTG
TACATGGCACAATGTATGGCAAGAATTACAATACAATCAATACAATGAGT
ACTATACTAGTCTATTCTATTCTGAAAACTATAATCACAAGGATATGAAC
GTAAATGGCGTAATGATGTAATATACGTTAAACGTTTCAGTCTGTTACAA
TACATTCTCTCTTTCGTAAAGCGCTACATATGTATTGGCCTAAGTACGTA
GATATGCTGTCGGGACATGACATAAGTAGATTGAACATGTCTGTGTTTAC
CTTTGGCAAGGGTTTACTGGATTTACATGTGGTCAGATTCATTAATTTTC
GTCTATCTACAGTGTATGCGGGGCATGTCATTTTTTTGTTGGAGCGGGTC
GAAATAGGAGTTGAATTTAGAGGGGTCGTCAGGCTCCAGTGATTACATGC
ATTGTGTTAATTGGAGATTTCTGAAGACTACTTTTCCATGAACTTAGAGG
AACAAAGCCTATCACACTTCTAACCAGTTATGAATTATAACCGTCAAACA
CTAAACAACTGTGTGAAGTTTTGTCTCTCTTCGTTGACTGAAAAAAGTAG
TCTACAGAATCTTGATCCAAAACATCAATAGTTTGGAAAAGAATTCAAAC
GGCTTTGATTTGACGCCTTACTCTATACTAACAGCTGTAAGGAAGAACTA
ATAAATGTTCTGAAATCTTAAAAATAGCATGTAGCTTTTACAGACATTTG
TAATTATACAATCGTAATTTCAGCCTCTCTGCTTCTGACGGACTTTCAAC
GGTGCCTTCAAGGGTGTAGTTATCTAGAAATCAACTCAGTCGCTCATAAA
AATTTGAACAACAAGCTGAGACATTTCAGTGGTCTCAATAAGATTTGTGC
TTTTACATTTGGTCCACACTTCAACTTATTTCATGGACAAATGAGCACGT
TATTTAACCACTTGATTCGTATTTCTGCCTCTCGTAGCGTTAGAAAAACA
ACGATGAAATTAAGCCTACACAANCCTCTCGTAGCGTTAGTAAAACAACG
ATGAAATTAAGTCTACACAAAACCCTCCAAATTGGTTAAATGTTTTTCCA
ACTGAATTTTCTTAGAAATATATAAGCTAATTCTTGTAGTACGATCTTGT
GTTGAATATGATTACGAGTATATATATAGTGGCATCGTGTGGCGCAATCG
GTAGGGTGTTTCGCCCAGAACCGAGAAGTCCCGGGTTCGAAACCACTGCT
ATACGCCGATGTTGTGCCCTTTGGATAGGCACTTTACACGACTTTCCTCA
TAGTGGTGGGAATGGGTAGCTGGCTTCGGTCGGGGGAAGGTTATATTAAG
GTCACTTGCTGGCGCCGAAAGGCAGCCGCCCACACCCTTGCGACATTTGC
ACAAAGTGCAAGTGTGGAGCAAATAAGTATCTATTGTATAACATATGATT
GTAAACTCTGTAGCAATCCAGCACTGACTGCCATTGCACGAGTAATTTCT
GACCAATAAACCTGCTTTACAACCTTGTATCTAATTATGTACATTGACGT
GTAAAATTTGTTTATCACCAGACTCGTTTAGGGACCCAAACATCGTTCGC
CCTCCCGGACTGGACAAGGCGGGATTTAACGTTTTGGTCGGGTGTTCGGT
GTGTGTGGGGCTCGTCATCATTGCGGTGATGGTGGCAATCTGCTACCACG
TGTACATAAAACCACGCAGGTAAAACTACAAATAACACGTAGATTATGAG
AAATAGAATTCTTATACTGTACTATTCTACAGCATCACGTAGCGGTAACC
GTATGCACTGCAACATGTTAAACTGCGCTTTACAAGCAAACTGTATACTT
AGTAACCCACCATGTCACTTACACTGCACTGTTACAGATGAGAAAATCTA
TATGAAGAAACAAAATAAGAAAACTTGTCGTACACAGCGAAGAGTTGTAT
TTTCATGAACGCCATTTTCCTCAGGGTAATTCTGGCTGGTTCACATTGCA
CTGCAGCCATAGGTGTCGCTTCTTATAGATGCGGTACCAAACGTATTTGT
ATAATATATATATATAGGTAATGTGGTGTTAGGAATGCGGTCCCAAATTA
TATCAAGAAACAATAATTCACTGACGCATAACATTCATGTTTTGTTTTTG
ACTGTTTCCAGGAGAGAATTTCATCTCACCGAAACCACAGAGCTGTAGCT
GACTGCGAACATCAAAGACGAAAGAAAACATAAAACAAAATGGCCGAGAC
TCTATTGATCACCTTGGCAGATAGTTTTTGATGTCACCACAATTCGGCTG
GAAGCTGTGACGAAGGATAATGGACAAGAAAAGAGTAAAACAGACCAAAA
TCACTAAAGATCTCGTTAACATGTGTGTGCTTGGTGTGTCAGATGGCAGT
TACACCGGCTATAGAGATACATAAACAGAAATTTTGCTGAATTATGCTGA
CTTTACAAGTCCTTGTTCG Coding sequence (CDS) from alignment at Sc0000045:1159100..1161918- >transcript:BL86446_cuf0 ID=transcript:BL86446_cuf0|Name=transcript:BL86446_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=972bp|location=Sequence derived from alignment at Sc0000045:1159100..1161918- (Branchiostoma lanceolatum)
AAAAAAGTCGTCAGACGAGCCGGATCAGTCTCTTTTGCCTGGTCAACAAA
CAGGAAGAACTCTGTGAGGAAAATGTCGTTTTTTAACCATCTGTTGGCTG
TGTTCGGGACGCTTCTGGTGACGACTGGGACAACATGGGACTCGTTTAGG
GACCCAAACATCGTTCGCCCTCCCGGACTGGACAAGGCGGGATTTAACGT
TTTGGTCGGGTGTTCGGTGTGTGTGGGGCTCGTCATCATTGCGGTGATGG
TGGCAATCTGCTACCACGTGTACATAAAACCACGCAGGAGAGAATTTCAT
CTCACCGAAACCACAGAGCTGTAGAAAAAAGTCGTCAGACGAGCCGGATC
AGTCTCTTTTGCCTGGTCAACAAACAGGAAGAACTCTGTGAGGAAAATGT
CGTTTTTTAACCATCTGTTGGCTGTGTTCGGGACGCTTCTGGTGACGACT
GGGACAACATGGGACTCGTTTAGGGACCCAAACATCGTTCGCCCTCCCGG
ACTGGACAAGGCGGGATTTAACGTTTTGGTCGGGTGTTCGGTGTGTGTGG
GGCTCGTCATCATTGCGGTGATGGTGGCAATCTGCTACCACGTGTACATA
AAACCACGCAGGAGAGAATTTCATCTCACCGAAACCACAGAGCTGTAGAA
AAAAGTCGTCAGACGAGCCGGATCAGTCTCTTTTGCCTGGTCAACAAACA
GGAAGAACTCTGTGAGGAAAATGTCGTTTTTTAACCATCTGTTGGCTGTG
TTCGGGACGCTTCTGGTGACGACTGGGACAACATGGGACTCGTTTAGGGA
CCCAAACATCGTTCGCCCTCCCGGACTGGACAAGGCGGGATTTAACGTTT
TGGTCGGGTGTTCGGTGTGTGTGGGGCTCGTCATCATTGCGGTGATGGTG
GCAATCTGCTACCACGTGTACATAAAACCACGCAGGAGAGAATTTCATCT
CACCGAAACCACAGAGCTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000045 | genome | Sc0000045:1159100..1161918 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86446_cuf0 |
| Biotype | protein_coding |
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