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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86695_cuf0 >transcript:BL86695_cuf0-protein ID=transcript:BL86695_cuf0-protein|Name=transcript:BL86695_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=446bp
LRCSPIRRYEAFDFSKDLCSGSIKRRDLVEGVRDDLLDVLRVGVGARVIL
CRNVNVEDGLVNGAFGTVTGMKGGEDNASEVATVYVLFDNPRVGAEERQK
SAVPKEIPVNSVPVRQIESTLKKIRNVTRHQIPLKLAWACTTHKVQGMTV
PKAVVSMKKAFASGMSYVALSRVCSIGGLYITDYKQDSIYCDEQVEEAVK
SMRHLQFRCDPFINIDDRSESNRVLNIVPHNTEGLVGHFKSLKSTCLLKA
DIICLTETWLSGDVQSSQVQLENFTVFRQDRRRVCEADSMTTSSPHGGVA
VYVRDGYRCSEIPIPSDIRLECVVMRMSAEGVEILIVPLIYRPPNVKKDV
FICNLEKLMQHLATVKRNTTIFLGDFNENLISGEDNKKILNFFVTKDFEQ
LVEDPTTMKGTLIDHVYISPVPSNVSCGVIQTFYSYHDAVYCSLYQ Run BLAST on NCBI mRNA from alignment at Sc0000237:120548..123047+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86695_cuf0 ID=transcript:BL86695_cuf0|Name=transcript:BL86695_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2500bp|location=Sequence derived from alignment at Sc0000237:120548..123047+ (Branchiostoma lanceolatum)
CCTCCGGTGTTCACCGATTAGACGATACGAGGCCTTTGATTTTTCCAAAG
ATCTGTGCTCAGGTTCGATTAAAAGGAGAGATTTAGTTGAAGGGGTACGA
GACGACCTACTAGATGTGCTCCGAGTCGGAGTTGGTGCTAGGGTCATACT
TTGCCGCAATGTCAACGTTGAAGATGGTTTAGTGAATGGTGCATTTGGAA
CTGTGACTGGAATGAAAGGTGGGGAAGATAATGCCAGTGAAGTTGCAACT
GTTTATGTGCTATTTGATAACCCAAGGGTAGGTGCTGAGGAAAGGCAAAA
GAGTGCTGTTCCCAAGGAGATACCTGTCAACTCAGTGCCAGTGCGTCAGA
TCGAGAGCACCTTGAAAAAAATTCGCAATGTTACACGTCACCAAATCCCG
TTGAAGCTAGCCTGGGCATGTACGACACACAAAGTGCAGGGCATGACTGT
TCCTAAAGCGGTTGTCTCCATGAAAAAGGCTTTCGCATCAGGTATGTCGT
ATGTGGCATTAAGTAGGGTTTGTTCAATAGGTGGGCTCTACATTACCGAC
TACAAGCAGGACTCTATCTACTGTGATGAGCAAGTAGAGGAGGCGGTCAA
AAGTATGAGGCACTTACAGTTTAGATGTGACCCGTTCATAAATATTGATG
ACAGATCTGAAAGCAATAGGGTCCTAAATATTGTCCCCCACAATACTGAA
GGCCTGGTAGGCCACTTTAAAAGTCTGAAATCCACCTGTCTGCTCAAAGC
TGATATAATATGCTTGACTGAGACATGGCTATCTGGTGATGTGCAGTCTT
CTCAGGTGCAGCTAGAAAACTTTACTGTGTTTCGTCAAGACAGGAGACGT
GTTTGTGAGGCAGACTCTATGACAACAAGTTCCCCTCATGGAGGAGTGGC
AGTTTATGTCCGTGATGGGTACAGATGTTCTGAAATACCTATTCCAAGTG
ACATACGCCTTGAATGTGTGGTTATGCGTATGTCTGCTGAGGGAGTGGAA
ATTCTCATTGTACCTCTCATTTACAGGCCACCCAATGTGAAAAAAGATGT
ATTCATATGCAATTTAGAGAAATTGATGCAGCACCTGGCCACGGTGAAAC
GAAATACTACAATCTTTCTTGGGGACTTTAACGAGAACTTGATTTCAGGG
GAAGACAACAAAAAGATTCTGAATTTCTTTGTGACAAAGGATTTCGAACA
GTTGGTGGAAGATCCTACAACCATGAAAGGAACCCTTATTGACCATGTTT
ACATTTCACCAGTGCCATCAAATGTAAGCTGTGGGGTCATACAGACATTT
TACAGTTACCATGATGCTGTGTATTGTTCGCTGTATCAGTGATGCTGCAA
TAACCTGTGAAAAGGCGATGGAATAGAAAAAAATTCCTTCCTTTGTTATC
ATAATGAGGATATGCACCAGCTCTGCCCTTGCCAACCGTATTAGGTGGGC
AAGGGAGAGGAGGCATTACCCGCTCCGCCTACGGGGGTTCCTGGTGCAAA
AAAAAAGGATAGTCGCCAGTCTGGCCTTGCATACTCTGATTGGTCAAACT
CAATGTTGAACAAACAGGGTATGCGAGGGGGAGGGTCATATATACCCGCT
CCGCCCTTGCCAACCACTAACCTCAGTGGTTGGTAAGGGGGTTCCTTGCG
AAACAGGAACCCCCTTACCAAGAAACCATTGAGGTTTGGAGTTTGTAAGG
GGGTTCCTGGCGACATAAGGATCATCACCAGCTCTGGTCTTGGTAATCCT
GTTTGGTCAAAGCTGAACAAACAGGGTATGCAAGGGGGAGGGGACATGAA
CGATGAAGTCGTACCCACTCCGCCCTTGCCAACCCCTAACCTCAGTGGTT
GGTAAGGGGGTTCCTGGTGAAACAGGAACCCCCTTACCCACCCCTAAGGT
TAGGGGTGGGTAAGGGGGTTCCTGGTGTTACAAAGGAAGGAAAAAGAGCT
CTCCCCTGTGATTGTGGTTGAGGAAGGAAAAATAGCTCTCCCTGTGATTG
GGATAGAGGAAATGAAAAAAGAAGAAAAAAACGGAATGCACAAGGATAAC
AATAGGTAGTCACTTTTAAACAATGATCTAATCTCTTCTTTTTTTCCCTT
TCTTTTAGGAGACCATTCTTCTGTTCGAAGAGCACCTTAAAGTACCTTGG
AAAATATATCAGGCGGTTTTTTGGCTTAACTTTTTCTTTATATTATAGAT
TCTATATTTGTAATCTTGTATCTTGATCTTATGTAATATATCTTTTTCAC
TCTTATTGTCATGTTTCAACTCATTTTTCCTTTTGAAAGCATGAAATTCC
ATATTTAGAGTTCTCCACCACTGCATCATTGTCAGTAACCATAATTTTCC
TTTTCTTTTAAGTGGTTAAGCAGTCAGAAGATCATGCTCAAGCAGTCTGA
ACATACAGCAGGTATGCTTGTGCTAATATAACAAGGAAATAAAAATAGAA
TTGTTTTCTGTTAAAACACCAGTAAACATGTGTTTTAGATCTAGAGAAAA
Coding sequence (CDS) from alignment at Sc0000237:120548..123047+ >transcript:BL86695_cuf0 ID=transcript:BL86695_cuf0|Name=transcript:BL86695_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1341bp|location=Sequence derived from alignment at Sc0000237:120548..123047+ (Branchiostoma lanceolatum)
CTCCGGTGTTCACCGATTAGACGATACGAGGCCTTTGATTTTTCCAAAGA
TCTGTGCTCAGGTTCGATTAAAAGGAGAGATTTAGTTGAAGGGGTACGAG
ACGACCTACTAGATGTGCTCCGAGTCGGAGTTGGTGCTAGGGTCATACTT
TGCCGCAATGTCAACGTTGAAGATGGTTTAGTGAATGGTGCATTTGGAAC
TGTGACTGGAATGAAAGGTGGGGAAGATAATGCCAGTGAAGTTGCAACTG
TTTATGTGCTATTTGATAACCCAAGGGTAGGTGCTGAGGAAAGGCAAAAG
AGTGCTGTTCCCAAGGAGATACCTGTCAACTCAGTGCCAGTGCGTCAGAT
CGAGAGCACCTTGAAAAAAATTCGCAATGTTACACGTCACCAAATCCCGT
TGAAGCTAGCCTGGGCATGTACGACACACAAAGTGCAGGGCATGACTGTT
CCTAAAGCGGTTGTCTCCATGAAAAAGGCTTTCGCATCAGGTATGTCGTA
TGTGGCATTAAGTAGGGTTTGTTCAATAGGTGGGCTCTACATTACCGACT
ACAAGCAGGACTCTATCTACTGTGATGAGCAAGTAGAGGAGGCGGTCAAA
AGTATGAGGCACTTACAGTTTAGATGTGACCCGTTCATAAATATTGATGA
CAGATCTGAAAGCAATAGGGTCCTAAATATTGTCCCCCACAATACTGAAG
GCCTGGTAGGCCACTTTAAAAGTCTGAAATCCACCTGTCTGCTCAAAGCT
GATATAATATGCTTGACTGAGACATGGCTATCTGGTGATGTGCAGTCTTC
TCAGGTGCAGCTAGAAAACTTTACTGTGTTTCGTCAAGACAGGAGACGTG
TTTGTGAGGCAGACTCTATGACAACAAGTTCCCCTCATGGAGGAGTGGCA
GTTTATGTCCGTGATGGGTACAGATGTTCTGAAATACCTATTCCAAGTGA
CATACGCCTTGAATGTGTGGTTATGCGTATGTCTGCTGAGGGAGTGGAAA
TTCTCATTGTACCTCTCATTTACAGGCCACCCAATGTGAAAAAAGATGTA
TTCATATGCAATTTAGAGAAATTGATGCAGCACCTGGCCACGGTGAAACG
AAATACTACAATCTTTCTTGGGGACTTTAACGAGAACTTGATTTCAGGGG
AAGACAACAAAAAGATTCTGAATTTCTTTGTGACAAAGGATTTCGAACAG
TTGGTGGAAGATCCTACAACCATGAAAGGAACCCTTATTGACCATGTTTA
CATTTCACCAGTGCCATCAAATGTAAGCTGTGGGGTCATACAGACATTTT
ACAGTTACCATGATGCTGTGTATTGTTCGCTGTATCAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000237 | genome | Sc0000237:120548..123047 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86695_cuf0 |
| Biotype | protein_coding |
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