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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86710_cuf0 >transcript:BL86710_cuf0-protein ID=transcript:BL86710_cuf0-protein|Name=transcript:BL86710_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=102bp
TIITYTRLTTFVQLYEPKSEGTDAFSLAVYGVIVSKLPPKCPRRWPLQPM
TGSSLHPRIPHKLPSRATNNSTPLPSLRATNNLQPLEQCNPPLLSLFPSL
EP Run BLAST on NCBI mRNA from alignment at Sc0000118:770943..774452- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86710_cuf0 ID=transcript:BL86710_cuf0|Name=transcript:BL86710_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3510bp|location=Sequence derived from alignment at Sc0000118:770943..774452- (Branchiostoma lanceolatum)
ACCATTATAACGTACACTAGACTCACAACATTTGTACAGTTATATGAGCC
GAAGAGTGAGGGAACTGACGCATTTTCTCTTGCAGTTTACGGTGTTATTG
TATCAAAGTTACCCCCAAAATGTCCGAGAAGGTGGCCCCTGCAGCCGATG
ACTGGCAGCAGCCTCCACCCTCGTATCCCACACAAGCTGCCCAGCCGGGC
TACCAACAACAGTACCCCCCTCCCCAGTCTGCGGTAAGTTACTTGGTCGC
CTACTAAAAGAGACAATAGTGGGTGGTGGGTGAGAAGGATACAAATTTTA
AAAAAGAGGATGATATGAAAACAAATCGTTAAAGACGAAACGAGGAAAGG
ACTTTTGAACGAACATGAAAAATGCAACATTTTCACATGTCATTGAATTT
GTTAAGGGGGACGACCGAATTCAGTTTTCCTCTAAAACTTTTAACTGTTT
TTTTTTTCAGAGCTACCAACAACCTCCAACCGTTGGAGCAGTGCAATCCA
CCACTACTGTCGTTGGTAAGTGTAAGTCCAAACGTTACATGGTTCCCACA
GCCCTATACATATTTGACTTCGCCAAGAAGTCTATGTTTTGATGCTTGTC
TGTGTGTCTGTTAGTGAACAGAATAAGTCGAGAACGCCTGGATGGATTGT
TGTCGTATTTGGTGTGTTGATGTGTATGTGGGAAATCTCAAGATGATTAG
ATTTTGGGCGAAGTACTTTGCATAATTAACGAGAAAAGTGTAAAAATGTG
TTATATTGTATGAGTGTCAGTATACTATAGCTGGGTACCAGCTGGAACGT
GTTACTGGTGTAGGGGAAGTGTTACTGGTGTAGTAAGGCGATATTCCCAT
TGGGCCAGGGGTGTTTGACTGTGAAGCCTAAAACATGTTGGCTGGCACAA
ATTGGCTTCTCACTGACTTTTAGATCTTGATCTTGTGAAATTGCACTGTT
CCTCAAGGCAAGTAGTTACCTTCGCCGAGAAGGTTATGCATAGGGTAGCG
TTTGTATGTATAAGAAGACCAGCATAACTCAAGAATGCCTGGATGGGTTG
TCTTGATATTTGGTATGTTGGTAGGTCTTGGTGAGACCTGAAAATGATTA
GATTTTGGGCCCCCTAGCGGCTTGTTATAGTACTGAAGCGGAAATTCCTG
TTTTGATATCTCATGTTTTGGATATGCTATTGAACCGACTTTTGAGTGGT
AGATAGCTCTTTGGAAAGAGAAAGAGAGTAAAAGGTATCGGTTTGGACAC
CCTAGCGGCATTTTCTGGGACTGCAGGAGCAGGTTTTGCTTCAGACTGTG
AAAGGGAATAACTCAAGAAGGGCTTGATGGATGGTCATGCTTTTTGCTAA
GTGGATAGCTTGAGTGATGATTTACATGATTTGATACTTATTAAGCAAAT
CAGTATCTAATTTGCATAACTAATGATGAAAATTGATACATCCTCCAAAT
TCCATGATAGGACTCTCAAACATGTGACATGACCGAGGAAGAGAGAAATA
GTAATAAATATCAACTATGCAAATGAAGACCTCTTTTGCATAATTAATGA
GAAATGCTATAACTCTATAACTTACGTGGTGCTTTGTTTGATTGGATGAT
AATGATGCAAATCAGATTCTAATTTGCTTGATTAATGAGGTAATTTAAAA
ACCTGCTGTGTTCCATGATATGACTATTCAAATATGCGAATTTGTAACTG
AGGAAGAAAGGAATGTTGATAGATAGAAAATATGCAAATGTTGACTAATT
TGTATAATTAATGTTAAACTAATATAATTCCATACTAGTTAATGACGGCA
ATTTCATACTTGTGGCATTTGGAAGTAGTGTGAATGTGAACACCATAGAA
TCAAATTATGCTAATAAGGAGCTTATTTGCATAATTGATGATAAATGTTA
GCATGACCTTCTTTGTTTAGCTCATAGTCATACTTTGGACAACTTATGTT
ATTTGGGTGAAGACGACCAACTGGTATGATTCATAATTGATGAGAAACAC
TCCCAATACGTCAGTCATAAAGGTTAAGATCATAATTTTGGCGAAGGTAT
GAGGTCGTAGAACTCTTGTTATATATTAGGAACCATGAGGATAATCACTG
GGCTGTCTGTGCAAAGTCAGGCCTCGCTACGGCTCACGCCTTGTTTTGTG
TTTCAAGCACATTGAGACTCCCTGCCCTATTCTTCTCGATAAGTGTGTTG
GGTTCTTTTACATTCAGAAGTTTAACGCCGTAAGTTCCTTCATACCATAG
AGTCGTTGGCTTTACGTCCCAATCCGAAAGGACGATGCGACTTTTTTCCA
GACGTTTTACGTGTTTGCATTTGTCAGTTCCCCAGCCTGGAGCCGTAGTG
GTGACCGTCAATCCAACGGACCCGCAGCAGCCAGCCCGTCCGGCTCACGT
GCCCCTCCTGCCGACAGGACGTCCTGACCACCGTGAAGCACGAGGTCGGC
ATGTTCACTTGGCTCATGGTCGGCGCCGTTTTCCTCTTTGGGTGAGTATT
GAAATTATGTATGAACTATAAAGTAAAGCGGATTCATTCCTCAAGCTAAC
CGACATCTTTCACACCGCAGTCATCCCTCAGTACGACATACTAGTACATT
GAGGTTGCCCACTACTTTGCCTGGTGAAATCATATATGAATATCGTGATT
GTGGCAGCAATTGCAGACAGATTCTGAATTTGCTAGTTGCTAAAGCTAAA
TGGACACATGTGGTCTGTAGAAAATACGTGTTTTGTTTCACTGAATTTAT
AACAAAACTTGAAGAGTGATGTTTGCTATTTCGTTGCTTAGAAACGATGG
TTTCAAGTATGCCAAAGTAGGGATGTCCCTGTAGCTCACCTAGCTGGGAG
CAGAGCCACACTTGAGCTCTGGTTCCAATGCAGATGGTAACGGGGCGACC
CCGGTTCAATCCTGGTAAAGGCATCTCGATTGGGGTTGCATCCGTCTTTA
GGAAAGGACGTATACTGGGGGTCACTTGTCAAGGTGCACAGTAAAGGGGA
AGGGCCACCTGTAAAATACGCCATGCTACTGAAACAGCAAGAAAACCTGC
CGCCCTGTGTACCGCTAGTATAGGAACTAGGACGGTCTGAACTAACGAAC
AAACTAAAGTGCTAACTTGCCAAAGATTTGCCAACTGATGAAAGCACCTG
AGAAGTACACGGTATATAGAGATAAAGTACAACGATTCTAATGTTTTTGT
CGTTTATTTTCTAGGTTTGCGTTTCCGCTAGTGTGGCTGGGGTGCTGCTT
CATTCCGCTGTGCATCAGAGACTTTAAGGACGCCAAACACACCTGTCCGA
ACTGTAGCACTCACCTGGGCACCCACAAGAGGGGCAACTGAACGGTCTTG
AAAATATATCTTACAACACATGATATCGTCGTTGAAAAGTTCTTCGCGCC
ATTTATTGATTTATGGGCACTTCAGTGTTGTGTGTTGTGTTATAACAATG
AAAATGCACAATTTGTCTTTTTTCTTCGAATGTTTCGTTGTTTGTCAAGG
TAATGGCGAT Coding sequence (CDS) from alignment at Sc0000118:770943..774452- >transcript:BL86710_cuf0 ID=transcript:BL86710_cuf0|Name=transcript:BL86710_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=927bp|location=Sequence derived from alignment at Sc0000118:770943..774452- (Branchiostoma lanceolatum)
ACCATTATAACGTACACTAGACTCACAACATTTGTACAGTTATATGAGCC
GAAGAGTGAGGGAACTGACGCATTTTCTCTTGCAGTTTACGGTGTTATTG
TATCAAAGTTACCCCCAAAATGTCCGAGAAGGTGGCCCCTGCAGCCGATG
ACTGGCAGCAGCCTCCACCCTCGTATCCCACACAAGCTGCCCAGCCGGGC
TACCAACAACAGTACCCCCCTCCCCAGTCTGCGAGCTACCAACAACCTCC
AACCGTTGGAGCAGTGCAATCCACCACTACTGTCGTTGTTCCCCAGCCTG
GAGCCGTAGACCATTATAACGTACACTAGACTCACAACATTTGTACAGTT
ATATGAGCCGAAGAGTGAGGGAACTGACGCATTTTCTCTTGCAGTTTACG
GTGTTATTGTATCAAAGTTACCCCCAAAATGTCCGAGAAGGTGGCCCCTG
CAGCCGATGACTGGCAGCAGCCTCCACCCTCGTATCCCACACAAGCTGCC
CAGCCGGGCTACCAACAACAGTACCCCCCTCCCCAGTCTGCGAGCTACCA
ACAACCTCCAACCGTTGGAGCAGTGCAATCCACCACTACTGTCGTTGTTC
CCCAGCCTGGAGCCGTAGACCATTATAACGTACACTAGACTCACAACATT
TGTACAGTTATATGAGCCGAAGAGTGAGGGAACTGACGCATTTTCTCTTG
CAGTTTACGGTGTTATTGTATCAAAGTTACCCCCAAAATGTCCGAGAAGG
TGGCCCCTGCAGCCGATGACTGGCAGCAGCCTCCACCCTCGTATCCCACA
CAAGCTGCCCAGCCGGGCTACCAACAACAGTACCCCCCTCCCCAGTCTGC
GAGCTACCAACAACCTCCAACCGTTGGAGCAGTGCAATCCACCACTACTG
TCGTTGTTCCCCAGCCTGGAGCCGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000118 | genome | Sc0000118:770943..774452 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86710_cuf0 |
| Biotype | protein_coding |
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