|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87237_cuf0 >transcript:BL87237_cuf0-protein ID=transcript:BL87237_cuf0-protein|Name=transcript:BL87237_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=222bp
VSLTKGVTSKLSERYDPKVLEKVDWIKTKKQMLNPSDSDEDFSKLNSMTV
KTTYKHHRRSDFEEGKVNTSQKKCGKDSRNIKPTSESSSHEHVKEKGGKV
RTKSSSSSSNSVSKKEASNDKHRKIMACKSSRSQKKLIPKSKSPYDLTFA
DSDSDTRAREKSRQSKSALKKVKSCEDKDGKSKMTPGIKVSHADLFGEES
EDDVSMATGDGTSQDASSGIYT Run BLAST on NCBI mRNA from alignment at xfSc0003085:8..1969- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87237_cuf0 ID=transcript:BL87237_cuf0|Name=transcript:BL87237_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1962bp|location=Sequence derived from alignment at xfSc0003085:8..1969- (Branchiostoma lanceolatum)
AGTATCTCTAACAAAGGGTGTAACCAGCAAACTCTCAGAACGTTATGATC
CTAAAGTTCTTGAAAAAGTGGATTGGATAAAAACTAAAAAACAAATGTTG
AACCCAAGTGACTCTGATGAAGACTTTAGCAAGCTAAATAGCATGACAGT
AAAGACAACCTACAAACACCATCGTAGATCCGATTTTGAAGAAGGGAAAG
TAAATACAAGTCAGAAAAAATGTGGAAAAGACAGTAGAAACATCAAGCCA
ACTTCTGAAAGCAGTAGCCATGAACATGTAAAAGAGAAAGGGGGAAAAGT
TAGAACAAAGTCAAGTTCTAGCTCTTCAAACTCTGTGTCCAAGAAAGAAG
CCAGCAATGACAAACATAGGAAAATAATGGCATGCAAAAGTTCAAGGTCA
CAGAAGAAATTAATTCCAAAATCAAAGTCGCCATATGACCTGACATTTGC
AGACTCAGACAGTGATACACGGGCCAGGGAGAAATCAAGACAGTCAAAGT
CAGCCTTGAAGAAAGTGAAAAGTTGTGAAGACAAGGATGGGAAGTCCAAG
ATGACACCCGGTATAAAAGTGAGCCATGCTGATCTGTTTGGGGAGGAAAG
TGAAGATGATGTATCCATGGCAACAGGAGATGGTACTTCCCAGGATGCAT
CATCAGGTATATATACTTAACACAAAAAGTTTGGAAACTTCAGTTGATGA
TATCTCTGTTGTTCCTGTATCAATTATATTGTCATAGATATTAGAAAATG
TATTAACCTTTACAATAGTAATAGTACCCCACTTAGTATGCTAGAACATT
TGTGGATTGAGCATCCGGGCTGATCATTTGAGTGGGTCTCAAAGCAAAAG
TGCCAAAATTAACATTGCTTGAGATTGGCAGGGAAATCATAGCATTTTTT
TTGGCAACCCTCCCACAAATTCAGTCCTGGTGCTCCTGGCACAAAACCGT
AATCATTAAAATACAAATTGCATATGATTTTAAAGGACAATAGACCAGCT
TTCCAATGATATAAAACACACTATACCTATCATCACAAAACAACAGACAG
ATAATCCTTGGAAATTTCGGCACATTATTCTCAAGACTAGCTCACTTATA
TATGCAGCTATGGATCATGGCTAGTCAGGTGACATATTACAAAAGATAGA
AATAGTCTTTCAAATGTTATATAATGCAGTGAAATTGATAAAGACCTACC
AAAATCAAGTTTCCAAACTTTTTAGTTCAAACAGTTTAGTTACCTCCGTG
AGGGAGGTTCACCTCCAATGAGGGTACTGTGTGTTTGCGCTTATAACTTA
AGATCCTTTTGATGAATTTGTTTGAATTTTAGCCTGTTGGTAGTTATAAA
GGTCTCCAACAAATATGGCAATTTGGGGCTCTTAGCAGTATTTTAAGGTA
CTGCAGCATTACAGGAAGACACCCCTTTCCTGAAAGTAGTGTGGTATAGT
ACACGCATGGACAGCTGATCCGCCGTTCCGATGCCCGGTCCCCTTCTGGG
AGGGAGATAGGTGGAATTGATTTAGGGAAGAAGAGAAGGGGAGGATCACT
TATAAGACATCTGTGATGGTTAAATGGTCATCATGACTACAGGACTCAAA
ATTCTCTTTCCAGGCATTGCGATATCGCAGGTTGTCAGTTTGCAAGTTTT
ATTTTTCTACCCGCAAACCTCAAATTTCTCCTGCAAGTTGCAAGTTGCAG
ATGGGTATGTGCAACCCTGGAGTAAGATGTGAGCTGTTAAAATTGTGTAT
TTGTCAGACCTACATGTAAGTTCTGAGCCGACAATTTAATTTATAGTATT
GGTGCAAATTAGAAAAAGGGAACAAAAGATGCAGTGCCGTACTATTAGAG
GACACTTGCTGTTACGGCTTAAAATACTATTATTGTATGCGGCTTCTTAC
GGTACTGCAGCGGAACTTCCTGTTTCAATATCTCGTGTTCTGGACAAGCT
ATGGAACTGATT Coding sequence (CDS) from alignment at xfSc0003085:8..1969- >transcript:BL87237_cuf0 ID=transcript:BL87237_cuf0|Name=transcript:BL87237_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at xfSc0003085:8..1969- (Branchiostoma lanceolatum)
GTATCTCTAACAAAGGGTGTAACCAGCAAACTCTCAGAACGTTATGATCC
TAAAGTTCTTGAAAAAGTGGATTGGATAAAAACTAAAAAACAAATGTTGA
ACCCAAGTGACTCTGATGAAGACTTTAGCAAGCTAAATAGCATGACAGTA
AAGACAACCTACAAACACCATCGTAGATCCGATTTTGAAGAAGGGAAAGT
AAATACAAGTCAGAAAAAATGTGGAAAAGACAGTAGAAACATCAAGCCAA
CTTCTGAAAGCAGTAGCCATGAACATGTAAAAGAGAAAGGGGGAAAAGTT
AGAACAAAGTCAAGTTCTAGCTCTTCAAACTCTGTGTCCAAGAAAGAAGC
CAGCAATGACAAACATAGGAAAATAATGGCATGCAAAAGTTCAAGGTCAC
AGAAGAAATTAATTCCAAAATCAAAGTCGCCATATGACCTGACATTTGCA
GACTCAGACAGTGATACACGGGCCAGGGAGAAATCAAGACAGTCAAAGTC
AGCCTTGAAGAAAGTGAAAAGTTGTGAAGACAAGGATGGGAAGTCCAAGA
TGACACCCGGTATAAAAGTGAGCCATGCTGATCTGTTTGGGGAGGAAAGT
GAAGATGATGTATCCATGGCAACAGGAGATGGTACTTCCCAGGATGCATC
ATCAGGTATATATACTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003085 | genome | xfSc0003085:8..1969 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87237_cuf0 |
| Biotype | protein_coding |
|
