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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87273_cuf0 >transcript:BL87273_cuf0-protein ID=transcript:BL87273_cuf0-protein|Name=transcript:BL87273_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=435bp
ISNHEQALQMRRGIYGQGTAHSDIDQSLSSLGSDWHHLGDFTKAISYFEQ
ALQIQRSIYGHDRRHPNIASLLNNLGEAWGHLGDYRKAISYHEPALQMYR
SIYGQDRAHCEIATSLNNLGLAWLYLGDYRKARSYHEQALQMRRSIYGQT
TPHPHMADSLNNLGSAWCNLGDYRKAISYHEQALQMHRSIYGQTTAHPEI
ANSLSNLGSAWHYLGDYTKAISYYEQVLPMYQSIYGQSTAHLDIATLFSN
LGLAWYKLCDCKQASSYFEQSLQMLRVMYGPTAVHPAIALSLNNLGMAWF
DLGDHGQAISYNGQALQMYRTIYGKDTPHPSIATSINNLGRTWYHMGDYT
KAINYHEQALQMRRSIYGQSTAHPDIAKSLNNLGMAWYMLGDDRKAISLC
QEALDMMRRVYPQDKSHPLLKTFESNLSMLKLTQR Run BLAST on NCBI mRNA from alignment at Sc0000001:179279..181325+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87273_cuf0 ID=transcript:BL87273_cuf0|Name=transcript:BL87273_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2047bp|location=Sequence derived from alignment at Sc0000001:179279..181325+ (Branchiostoma lanceolatum)
ATCAGCAACCACGAACAGGCACTGCAGATGCGTAGGGGTATCTATGGTCA
GGGTACAGCACATTCAGACATTGACCAATCACTCAGCAGCCTGGGGTCAG
ACTGGCACCACCTGGGTGATTTCACAAAAGCAATCAGCTACTTTGAACAG
GCATTGCAGATTCAAAGGAGTATCTATGGTCATGATAGAAGACATCCTAA
CATTGCCTCCTTACTCAACAACCTGGGGGAAGCCTGGGGTCACCTAGGTG
ATTACAGAAAAGCAATCAGCTACCATGAGCCAGCACTGCAGATGTATAGG
AGCATCTATGGTCAGGATAGAGCACATTGTGAAATTGCCACCTCACTTAA
CAATTTGGGTTTAGCCTGGCTTTACCTGGGTGATTACAGGAAAGCAAGAA
GCTACCATGAACAGGCACTGCAAATGCGTAGGAGTATCTATGGTCAGACT
ACACCACATCCTCACATGGCTGACTCACTCAACAACCTGGGGTCAGCCTG
GTGTAACCTGGGTGATTACAGAAAAGCAATCAGCTACCATGAACAGGCAC
TGCAGATGCACAGGAGTATTTATGGTCAGACTACAGCACATCCTGAAATT
GCTAACTCACTCAGTAACCTGGGGTCAGCCTGGCATTACTTGGGTGATTA
CACAAAAGCAATCAGCTACTATGAGCAGGTACTGCCGATGTACCAAAGTA
TCTACGGTCAGAGTACAGCACATCTTGACATTGCCACCTTATTCAGCAAC
CTAGGTTTAGCCTGGTACAAGCTGTGTGACTGCAAGCAAGCAAGTAGCTA
TTTTGAACAGTCACTGCAGATGCTAAGGGTTATGTATGGTCCGACTGCAG
TACATCCTGCCATTGCCTTGTCACTCAACAACCTGGGGATGGCCTGGTTT
GACTTGGGTGATCACGGACAAGCAATCAGCTACAATGGACAGGCACTGCA
GATGTACAGGACTATCTATGGCAAAGATACACCACATCCTTCCATAGCCA
CCTCAATCAACAACCTGGGGAGGACCTGGTACCACATGGGTGATTACACA
AAAGCAATCAACTACCATGAACAGGCACTGCAGATGCGAAGGAGTATCTA
TGGCCAGAGTACAGCACATCCAGACATTGCCAAATCACTCAACAACCTGG
GGATGGCCTGGTACATGCTGGGTGATGACAGGAAGGCCATCAGTCTCTGT
CAAGAAGCCTTGGATATGATGAGACGGGTTTATCCCCAAGACAAAAGTCA
CCCATTGTTAAAAACCTTTGAATCTAATCTTTCTATGCTGAAATTAACTC
AGAGATAGTAGACTTCCCCCTCTGTCCCAGGTGCAGATCTGGACTTCCAA
TTTGATGGAATTTAAGGTTGCACCAACAAATGTGTTTCTCAACCCTGAGC
CTATGCTGACTTCTGCGATAACCATTACAAATGAGTTGATTGAATACAAG
AATAGGGTTAAAAATCATATCACTGTCTTAGCCCAACATAAAGAAACTAT
GTAATACGTGTTGTACATATCTGTTCATAGCACCAATACCAGCAATACTG
CTTGGGTTGTCAATTGTATTACGTTGTTTGCAATTCTCAAGAAATCAGAT
AAAAGAAAATAAAAGAAGCTAACGACTCTGCGGAGTTTCCTTAATATCTT
AGTCAGCCACATACATGTACACAGGACACTTGAGGCTCACCTGTGCAGCA
AAGTTCTCCTCTGTCATGTTCTTCAAGATTGTGTCAAACTCCAGAAGAAA
TTTCTCCATCTTGGCATTGGCCTCTGTGACACTGAAGAAAATAGAAACAG
AAGCGACAGAAAGGATGCTAGAACCAAGATGTAACATTACATACAGCTAT
GTGGTCTGGTAGTTCATATAGGGCGATTTGTTTGCATGAAATGTTTCATT
CCTTACTGGTGAGGATTGTAAGATGTGACCCTTCCACAAGTGTTTCTTGT
TGCTACCAGTCCAGATCATCATTGAGCTGGAATGAAGTTCACTTGATTGA
AGTAAATTATGTAAACCTTTCATGAAGTTAGTTTAGATTGCCCCTAT Coding sequence (CDS) from alignment at Sc0000001:179279..181325+ >transcript:BL87273_cuf0 ID=transcript:BL87273_cuf0|Name=transcript:BL87273_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1308bp|location=Sequence derived from alignment at Sc0000001:179279..181325+ (Branchiostoma lanceolatum)
ATCAGCAACCACGAACAGGCACTGCAGATGCGTAGGGGTATCTATGGTCA
GGGTACAGCACATTCAGACATTGACCAATCACTCAGCAGCCTGGGGTCAG
ACTGGCACCACCTGGGTGATTTCACAAAAGCAATCAGCTACTTTGAACAG
GCATTGCAGATTCAAAGGAGTATCTATGGTCATGATAGAAGACATCCTAA
CATTGCCTCCTTACTCAACAACCTGGGGGAAGCCTGGGGTCACCTAGGTG
ATTACAGAAAAGCAATCAGCTACCATGAGCCAGCACTGCAGATGTATAGG
AGCATCTATGGTCAGGATAGAGCACATTGTGAAATTGCCACCTCACTTAA
CAATTTGGGTTTAGCCTGGCTTTACCTGGGTGATTACAGGAAAGCAAGAA
GCTACCATGAACAGGCACTGCAAATGCGTAGGAGTATCTATGGTCAGACT
ACACCACATCCTCACATGGCTGACTCACTCAACAACCTGGGGTCAGCCTG
GTGTAACCTGGGTGATTACAGAAAAGCAATCAGCTACCATGAACAGGCAC
TGCAGATGCACAGGAGTATTTATGGTCAGACTACAGCACATCCTGAAATT
GCTAACTCACTCAGTAACCTGGGGTCAGCCTGGCATTACTTGGGTGATTA
CACAAAAGCAATCAGCTACTATGAGCAGGTACTGCCGATGTACCAAAGTA
TCTACGGTCAGAGTACAGCACATCTTGACATTGCCACCTTATTCAGCAAC
CTAGGTTTAGCCTGGTACAAGCTGTGTGACTGCAAGCAAGCAAGTAGCTA
TTTTGAACAGTCACTGCAGATGCTAAGGGTTATGTATGGTCCGACTGCAG
TACATCCTGCCATTGCCTTGTCACTCAACAACCTGGGGATGGCCTGGTTT
GACTTGGGTGATCACGGACAAGCAATCAGCTACAATGGACAGGCACTGCA
GATGTACAGGACTATCTATGGCAAAGATACACCACATCCTTCCATAGCCA
CCTCAATCAACAACCTGGGGAGGACCTGGTACCACATGGGTGATTACACA
AAAGCAATCAACTACCATGAACAGGCACTGCAGATGCGAAGGAGTATCTA
TGGCCAGAGTACAGCACATCCAGACATTGCCAAATCACTCAACAACCTGG
GGATGGCCTGGTACATGCTGGGTGATGACAGGAAGGCCATCAGTCTCTGT
CAAGAAGCCTTGGATATGATGAGACGGGTTTATCCCCAAGACAAAAGTCA
CCCATTGTTAAAAACCTTTGAATCTAATCTTTCTATGCTGAAATTAACTC
AGAGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:179279..181325 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87273_cuf0 |
| Biotype | protein_coding |
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