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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87960_cuf1 >transcript:BL87960_cuf1-protein ID=transcript:BL87960_cuf1-protein|Name=transcript:BL87960_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
MWLGKPIFGMSTGDPLYVTDTLRVLDTVTTLQALWPLTNLVSSLHSSMAF
WSLVTHQVPAHLSLCAYCIRWCNVSDEVAESTEGGMLSLLLCTVAVEVTV
VEGTVGEMFSLLRCTVAVEVTIVEGTVGEMFSLSSIKNKLK Run BLAST on NCBI mRNA from alignment at Sc0001692:366..2753+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87960_cuf1 ID=transcript:BL87960_cuf1|Name=transcript:BL87960_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2388bp|location=Sequence derived from alignment at Sc0001692:366..2753+ (Branchiostoma lanceolatum)
TTTCAGGAAGCCACTGTCCTTGAGGTCTGCATAGCCCTGTTTGCTACGCT
GCCATAGTTGCAGACAGACATCCAAGAACCTGAGGTACAAAATAAATTGT
ACAAGTTCTAGTTGTTGGAATGTAATAGAGACTACAGCATAGGAGTAGAT
GAACAAAATACAGATAGATGACATATCTTTCCTCTACAAACAAATTCATC
TGTGAGGAGATCACTTATAGTAATAGCCAAACTTGTAATACTAGGATTTT
TAGTATAAACTTGAGTAGTGAAGTATAACTAAAACTAGAACTCACTCTGG
ATTCCACTGATTCCGCTTGTTGAGGACATGATCTCGCTGAATTTTCCACA
AGAGCTGCTTCCTGTGTTCCTTTGGGAACAGCTTGGTGACATCACTGTCC
ATCTTATTGAACATATGCTCTATGTCCTCATGGTCTTCCTTAGCTAGTCT
TATAGTCTCTTTTAAAGTAGCATATCTATCCTTGTGGTATTCAGCTCTGT
CATCTGCCCTGACACGTTTAGCTTGTTCTGCATTATATCTGTTCTTCTTT
TCCTCCTCACTTAGAAAGTCCCATCTTGTTTTTTTTGCAGGGATCTGGGA
GACATTGCCTGTCACTCGCTTCAACTTCTCACGTCGCCACCTGGCCTGCT
TCACTGCTGATCGTAGACTGTCACATTTTGTGCAGCGGACAACCTTTGCT
CCTGGCGCAACAGACACAAGCTGACTGCACTCCAACGAACGCAGGAGCTG
CTGTGGTTCAGCGGAGTCCTCACAAACAGTTTCTACCGCTGCTTTCAATG
CAGGGTATTTTGTCTGGGTATAAATCTGACCTCGAAGCCCACCACATGCA
GGAGTGTTTCCAATCTTTAACAAAACATTTTCAAATTCTTGAGTATTATT
GATGTGGCTGGGTAAGCCCATTTTTGGCATGTCTACTGGGGATCCATTGT
ATGTGACAGATACACTAAGGGTGTTAGATACTGTCACCACCCTGCAAGCC
TTGTGGCCATTAACAAACTTAGTTTCCAGTTTACATAGTTCCATGGCATT
TTGGAGCTTGGTTACACACCAAGTCCCCGCACATTTATCACTCTGTGCAT
ACTGCATTAGATGGTGTAATGTTTCTGATGAGGTTGCAGAATCAACAGAA
GGGGGGATGCTTTCTTTGTTGCTATGTACTGTTGCTGTAGAAGTAACCGT
TGTAGAAGGAACAGTAGGGGAGATGTTTTCTTTGTTGCGATGTACTGTTG
CTGTAGAGGTAACCATTGTAGAAGGAACAGTAGGGGAGATGTTTTCTTTG
TCTTCAATCAAAAACAAATTGAAGTAAAATGATGTGGAAAGTTGTTAAGG
TTTGTAATGCAATATAGTATACAACTATCTCTATTGTATAAACAGTTTGC
TCTCCATCTACCTCAAGTATATATATCAAGATTTCTATTTTTGTACATAT
AGGTAGAGCACCTGTTGTGCTATGATGTTATTTATTGTTCGTTGTAATTT
GTTGTTCAAGTTCAAAAAGTTACATGTACATCAACAAAGATTGAAAGAAC
ATATATAGGGGCTGTGCCTAAAAATATATCTATTTTACGAGTGTTAGAGT
TATTGTTGCAGGTAAAACCTTTCTATATCGTATATTTTCACATGTAACGT
TACACTGTTATAACGTTATACATGTAGTATAAAGAGTAACGTTATCAAGC
AAAGGTTATAATATATTTTTTCAACAGAGTTACTGTTAAGTTGTTTCGTT
CATATTTATTAAAGAGTTAAACACCAGTTTATTTGAGTGCCATCTCAATA
TTGATTAAATGTCAAACATATGTAGAAGGATATTGTCGTATGTTGTCGGT
CGTAATCCTTCTCTTCATCACTGTGGGGAAACACTCCTTGATAGCCCCAC
CGAACTTATCGAGTGGAATGCAGTCTGCATACGAAGAGCGGTATACGTTG
TAGGCATCCAGCACCCTCAGGTAGTGGCCCTTCTTTTGGCTGAACAGGTT
TCTAAGCCTATCACATATGAGAGAATAATTAGGAATGAAGCGTTCGCCCC
GACATGGCAGTACAACTCAACGGACAACGTATTTCGCCCCCCTCCCCCTT
CATCATCCAACCGGGCCGGCGCCATGCACGCAAGGGGTTTCGGCACAGCT
AGTAATTGTCATTATTATGATAAGCGTCGGCAATGTCAGTTTTGTGAACA
TAGTTTTGTTTTGCAGCATTAAACATGCGTCCTTCTTTGCTAAAGTTGCA
TCTGCATCTTACCGTGCTCACTAGATATCGTACTTCCGGGTTTACTTCGT
AAATGCGATGGCGAAAACCAGACGAAAAACGTGCAAAACCGTCCATTAAA
ACGAATAAGACGTACCTGCAGTGTAACACATCTTTCGT Coding sequence (CDS) from alignment at Sc0001692:366..2753+ >transcript:BL87960_cuf1 ID=transcript:BL87960_cuf1|Name=transcript:BL87960_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=426bp|location=Sequence derived from alignment at Sc0001692:366..2753+ (Branchiostoma lanceolatum)
ATGTGGCTGGGTAAGCCCATTTTTGGCATGTCTACTGGGGATCCATTGTA
TGTGACAGATACACTAAGGGTGTTAGATACTGTCACCACCCTGCAAGCCT
TGTGGCCATTAACAAACTTAGTTTCCAGTTTACATAGTTCCATGGCATTT
TGGAGCTTGGTTACACACCAAGTCCCCGCACATTTATCACTCTGTGCATA
CTGCATTAGATGGTGTAATGTTTCTGATGAGGTTGCAGAATCAACAGAAG
GGGGGATGCTTTCTTTGTTGCTATGTACTGTTGCTGTAGAAGTAACCGTT
GTAGAAGGAACAGTAGGGGAGATGTTTTCTTTGTTGCGATGTACTGTTGC
TGTAGAGGTAACCATTGTAGAAGGAACAGTAGGGGAGATGTTTTCTTTGT
CTTCAATCAAAAACAAATTGAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001692 | genome | Sc0001692:366..2753 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87960_cuf1 |
| Biotype | protein_coding |
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