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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88025_cuf0 >transcript:BL88025_cuf0-protein ID=transcript:BL88025_cuf0-protein|Name=transcript:BL88025_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=168bp
LGTWRNTRQINKFQRLVQKNQEQTSRSLPSECIHXQTSRSLPSECIHKWV
KNCSDRLLSDPELSVLVKGLNFAATDRHTQVVDTITQTELACRKIPEREA
NLLRSKVANIQPKKPQSNLSKEEQEGLKSLQQDKNIVILAADKGRLTVIL
NKEDYKRKCLDLLGDKNT Run BLAST on NCBI mRNA from alignment at Sc0001077:7692..9734- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88025_cuf0 ID=transcript:BL88025_cuf0|Name=transcript:BL88025_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2043bp|location=Sequence derived from alignment at Sc0001077:7692..9734- (Branchiostoma lanceolatum)
CTCTGGGAACATGGCGTAACACAAGACAAATCAACAAGTTCCAACGCCTC
GTGCAGAAGAACCAGGAACAGACCAGCCGTTCATTACCCTCGGAATGCAT
TCACANACAGACCAGCCGTTCATTACCCTCGGAATGCATCCACAAGTGGG
TCAAGAATTGTTCAGACAGGCTTCTGAGTGACCCGGAACTTTCAGTGTTA
GTGAAAGGCTTGAATTTCGCGGCTACCGACAGGCACACACAAGTGGTGGA
CACCATAACACAGACGGAGCTTGCATGCCGGAAAATCCCCGAGAGAGAGG
CCAATTTACTACGGTCGAAGGTCGCTAACATACAACCCAAGAAGCCTCAG
TCCAACCTTTCTAAAGAAGAACAGGAAGGTCTGAAGTCTCTACAGCAGGA
TAAGAACATTGTGATTTTAGCAGCGGACAAGGGGCGGCTGACGGTTATTC
TCAACAAGGAAGACTACAAACGAAAGTGTTTGGACTTACTTGGTGATAAG
AATACGTAGTCTCCAAGCAGACCTACCGGTTGGCAAAGACCGTATCCAAC
AGGCAGAAGGAGTTTTCATAGCCAACCCAAGTCTATAAGCTCCTTTTGCC
AGTTGGATACGGTCTTTGCAATCTATTGGGTCTGGTTGGAGACTACCGTA
GACTTGGAAAAAGGGACCCAACAACAAGATACAGGGACGAACTCATAGCT
GTACTCCAGCGGTTTCAGACTGAAGGTGGGTTAAACAATATTGCTTATAA
ACGGTTATGCCCAACCACACAAGTGCCTCCGAAGTTTTATGGTCTCCCTA
AAGTCCATAAAACTGGAATTCCACTGAGACCCATTGTTAGTAGTATTTGT
TGTACTTCTTGTTGTTATGTTGATCCACTTCCATAAGTAACTCAGTCACA
GACATATAGTTGCGTCTATAGTTCTTGTAATGAGAATGGTTAGTAGTGGT
ACAAACAGTGTGTATGCTCGATCCGGTGGTCCAGGCGGAAAGAGGTAGAA
TGTCTTCAGTGTCCAGTCTTTGAGTACTGCCTACTTAATATTCATGTTTG
GACTATTCTATACAGATGGTAGGGGTGCTTTCTAACTGTTATTAATACTG
ATATCACAACATCCCCCTTCTTAAGATGTTAGTTTCTTTGCTGAGCAACA
ACATGCATTATCTCTAGTTTCCTCACTGAAACATGCATTAACATATCTAT
TCTATTGTTCAGGATCAGTCCGTATTCAATGTCCATGTTCAATGTCCATA
TTCAGTGCGTTAACTCTGGTTCATGCATTACAAATTCAGCTTTCTAGGAG
GGTTGACCGCACGTCCTGATCGGGTGACGTAAGGTGCTGGTGTGGCTGAC
TGCTGTGTCGTCACCGGAACAGGTGTCACTGCAGGTTTAGTTGACGTTTC
AGGTGCAGGTGTTGCTGCCGTTGTCGTCTCTGCAGGTGTTGTCCTCAGGT
GTTTCCTGTTGCGTCGATACTCGGTACCCTCTGGTGTTTGCACGACATAT
GATCTCGGTTGGTCGCACTTTCTAATCACGTTGGCAGGTGTCCACCTACC
ATCTTGTTGCTGAACTCGGACAGTGTCTCCTGTTGATAGAGTTGGGAGAC
TCCTGGCACTTTTGTCGTACCAGTTTTTCTGCTTGTGCTGCCTTGCTTCG
AGATGTAGCTTCACGTTCTTGTGATCCACGTTTCTCGGCATTAGCTGTGC
ATTCGTTGGGGGCAGTCTTGTCCGCAGTCTTCTGCCCATCAGTATTTGAG
CTGGTGACTCAAGCTGGCTGTCGATCGGTGTGTTGCGATACTCCAGCAAT
GCCAGGTATGGGTCTCTCTTGTCTGCTTCTGCTTTGCGTAACAGACGCTT
GGCTGTTTGAACAGATCTTTCTGCCAACCCGTTTGACTGCGGGTACCTGG
GGCTCGCTGTGACGTGCTTGAATCCCCATTCTTCTGCAAATTTGGCGAAC
AGCTCGCTTGCGAATTGTGGGCCGTTGTCGCTCACCACCTTCTCAGGTAT
CCCATGCGTTGCGAACAGCTTTTTCATCTTTGTGATGACATCT Coding sequence (CDS) from alignment at Sc0001077:7692..9734- >transcript:BL88025_cuf0 ID=transcript:BL88025_cuf0|Name=transcript:BL88025_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=507bp|location=Sequence derived from alignment at Sc0001077:7692..9734- (Branchiostoma lanceolatum)
CTGGGAACATGGCGTAACACAAGACAAATCAACAAGTTCCAACGCCTCGT
GCAGAAGAACCAGGAACAGACCAGCCGTTCATTACCCTCGGAATGCATTC
ACANACAGACCAGCCGTTCATTACCCTCGGAATGCATCCACAAGTGGGTC
AAGAATTGTTCAGACAGGCTTCTGAGTGACCCGGAACTTTCAGTGTTAGT
GAAAGGCTTGAATTTCGCGGCTACCGACAGGCACACACAAGTGGTGGACA
CCATAACACAGACGGAGCTTGCATGCCGGAAAATCCCCGAGAGAGAGGCC
AATTTACTACGGTCGAAGGTCGCTAACATACAACCCAAGAAGCCTCAGTC
CAACCTTTCTAAAGAAGAACAGGAAGGTCTGAAGTCTCTACAGCAGGATA
AGAACATTGTGATTTTAGCAGCGGACAAGGGGCGGCTGACGGTTATTCTC
AACAAGGAAGACTACAAACGAAAGTGTTTGGACTTACTTGGTGATAAGAA
TACGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001077 | genome | Sc0001077:7692..9734 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88025_cuf0 |
| Biotype | protein_coding |
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