transcript:BL88063_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL88063_cuf0
Unique Nametranscript:BL88063_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL88063_cuf0

>transcript:BL88063_cuf0-protein ID=transcript:BL88063_cuf0-protein|Name=transcript:BL88063_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=127bp
DSPTDAYDIVEETRTPVNDTCDNATDSTYNPLVSDDNPKDEKLAVDTCDK
ETDSTYNPLVSDDNPKDEQLADDTCDNNETDSTYNTIVTDDDHPEERHTP
VDDTCDTPTDDMEQNKPDEEGIAVRKT
Run BLAST on NCBI

mRNA from alignment at Sc0000424:6638..7021-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL88063_cuf0 ID=transcript:BL88063_cuf0|Name=transcript:BL88063_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=384bp|location=Sequence derived from alignment at Sc0000424:6638..7021- (Branchiostoma lanceolatum)
GCGACAGTCCCACAGACGCGTACGATATTGTAGAAGAGACACGCACACCG
GTAAACGACACATGTGACAATGCGACAGACAGCACATATAACCCCTTAGT
TTCAGACGATAATCCAAAAGACGAAAAACTTGCAGTCGACACATGTGACA
AGGAGACAGACAGCACATACAACCCCTTAGTTTCAGACGATAATCCAAAA
GACGAACAACTCGCAGATGACACATGTGACAACAATGAGACAGACAGCAC
ATACAACACCATAGTTACAGATGATGACCACCCAGAAGAGAGGCACACAC
CGGTAGACGACACATGCGACACACCTACAGATGACATGGAACAGAACAAG
CCAGACGAGGAGGGCATAGCTGTGAGGAAGACCG

Coding sequence (CDS) from alignment at Sc0000424:6638..7021-

>transcript:BL88063_cuf0 ID=transcript:BL88063_cuf0|Name=transcript:BL88063_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000424:6638..7021- (Branchiostoma lanceolatum)
GACAGTCCCACAGACGCGTACGATATTGTAGAAGAGACACGCACACCGGT
AAACGACACATGTGACAATGCGACAGACAGCACATATAACCCCTTAGTTT
CAGACGATAATCCAAAAGACGAAAAACTTGCAGTCGACACATGTGACAAG
GAGACAGACAGCACATACAACCCCTTAGTTTCAGACGATAATCCAAAAGA
CGAACAACTCGCAGATGACACATGTGACAACAATGAGACAGACAGCACAT
ACAACACCATAGTTACAGATGATGACCACCCAGAAGAGAGGCACACACCG
GTAGACGACACATGCGACACACCTACAGATGACATGGAACAGAACAAGCC
AGACGAGGAGGGCATAGCTGTGAGGAAGACC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL88063gene:BL88063Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL88063_cuf0-E1BL88063_cuf0-E1-1564476830-462576Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL88063_cuf0transcript:BL88063_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000424genomeSc0000424:6638..7021 -
Properties
Property NameValue
Transcript idBL88063_cuf0
Biotypeprotein_coding