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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88199_cuf0 >transcript:BL88199_cuf0-protein ID=transcript:BL88199_cuf0-protein|Name=transcript:BL88199_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=137bp
DIARGWVTGIQHLMRARKSETIIDKRKRWILEYFHKGGNTDDSLDSKETK
AVLAQMNIQIKESQIDTLMQKLDKDRNGTWDLDEFTQFYNAMTAREEIKE
LFNRWKSDDPDPPNVCGYDEDGDNMHMRVHELMEFLA Run BLAST on NCBI mRNA from alignment at Sc0000015:2799694..2801326+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88199_cuf0 ID=transcript:BL88199_cuf0|Name=transcript:BL88199_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1633bp|location=Sequence derived from alignment at Sc0000015:2799694..2801326+ (Branchiostoma lanceolatum)
AAGACATCGCTAGGGGATGGGTTACTGGCATACAGCATCTCATGCGCGCA
CGAAAGTCGGAGACTATCATTGACAAACGCAAAAGGTAAAACTTACTCTC
ACAGTACATGTTTATATACTGTTAAACAAACCACATCCATCTTTTATTTA
TCCTCAATATGTTTCTCATTGTATTAAGCTTGAGAAGTAGACTTGTATCT
TACTCTGCATCATGATGAATTGACGAAATATTGATATTGGAGAAATGTTT
CATATCAATGTCGGAGAAAGGACGGTAACAAAGCACAGCGATGGCTTATT
CTAGTTTGGACTTTAAATCATCTCGGGTCCCGACTAAAATACTCCGGGTC
TAAATTGTAACCTTATCGTGAAAAGATCCACAGGGCCCCCATCGGAACCC
GTGTTGATTTTAAGTGAGAATTAATGTCAACCGACCAGAGCACCAAAGTA
GCCCGGCAGCCTCTGGGAGTCCCAGGTGCCCATCCCGAAATTGAAAAAAA
AAAAAACATCTCGTAAACTTCCCGGATGGGCATAGGTTTGGAAATAGCAT
AACTGTAGCATAACCGTCACAAATACGGATATAGAAAGGTACAGTGCTAA
CAGTTCCCTTAACATGTGATTGCAGGTGGATTTTAGAGTACTTCCACAAG
GGAGGGAACACGGACGATAGTCTTGATTCCAAAGAAACGAAGGCGGTCCT
GGCACAGATGAACATCCAAATAAAAGAGTCTCAGATCGATACGCTCATGC
AGGTACATCGTTAATTATTTTGATACAGCTGAAGCCCCTATCTCACTGGA
CCCGCGGCACGCTGGCGGCCTCGCTGCGTCCTAAATTGGATTTGTGTTAC
CCTTGACCTTATAATGAGAATATCATGGAGAACGTGTAAGTATTGTTAGA
AAGACAACAAAAGACACAAAGCGTAAAAAGATTCGTTTTTTAACAATGAA
ATTCGTTGAGCCCTCTGTCCGAAATAGTCCGGTCGCAGTGAGGTCGCCAA
CGTGCCGTGGGTCCAGTAAGATAGATGAACACTACTCTCCACAACACGTA
CAGGATTAATCAAAATATCAATGTGATGAAAAACAGTTATTAAGAATTAA
CTTATAATTGTTACAATTCGTCTCTGTTGTCAGAACGTTTATCATGCGTT
TATACTATTTCTTTTTAGAAACTAGACAAAGATCGGAACGGTACATGGGA
CTTGGATGAGTTCACCCAATTTTATAACGCCATGACAGCCAGAGAGGAGA
TCAAAGAGCTGTTCAACAGGTAAGATCTTTTCTATTAATAATGTTGTATA
CATGTACATTAAAATGTGTATCATACGGTGAGGCAATGCCACGAATGATA
TTCTGAAAATATTGAAATAGTGTCCAATGTAAATGGAATACAATGAAAAA
ACTAAGATTTAACGCTACTTAACATGACCTTAAAACGACGACAGATGTGA
TGCTGTGCACTGCAACAACAAGGTTATACGGATCTTGACTTTGAATAATC
TTTGCTTGACTTTGAATAATCAATACAATCAGATGGAAGAGTGATGACCC
CGATCCACCAAACGTCTGCGGGTATGATGAGGACGGAGATAACATGCATA
TGAGGGTGCATGAACTGATGGAGTTCCTTGCCC Coding sequence (CDS) from alignment at Sc0000015:2799694..2801326+ >transcript:BL88199_cuf0 ID=transcript:BL88199_cuf0|Name=transcript:BL88199_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1644bp|location=Sequence derived from alignment at Sc0000015:2799694..2801326+ (Branchiostoma lanceolatum)
GACATCGCTAGGGGATGGGTTACTGGCATACAGCATCTCATGCGCGCACG
AAAGTCGGAGACTATCATTGACAAACGCAAAAGGTGGATTTTAGAGTACT
TCCACAAGGGAGGGAACACGGACGATAGTCTTGATTCCAAAGAAACGAAG
GCGGTCCTGGCACAGATGAACATCCAAATAAAAGAGTCTCAGATCGATAC
GCTCATGCAGAAACTAGACAAAGATCGGAACGGTACATGGGACTTGGATG
AGTTCACCCAATTTTATAACGCCATGACAGCCAGAGAGGAGATCAAAGAG
CTGTTCAACAGATGGAAGAGTGATGACCCCGATCCACCAAACGTCTGCGG
GTATGATGAGGACGGAGATAACATGCATATGAGGGTGCATGAACTGATGG
AGTTCCTTGCCGACATCGCTAGGGGATGGGTTACTGGCATACAGCATCTC
ATGCGCGCACGAAAGTCGGAGACTATCATTGACAAACGCAAAAGGTGGAT
TTTAGAGTACTTCCACAAGGGAGGGAACACGGACGATAGTCTTGATTCCA
AAGAAACGAAGGCGGTCCTGGCACAGATGAACATCCAAATAAAAGAGTCT
CAGATCGATACGCTCATGCAGAAACTAGACAAAGATCGGAACGGTACATG
GGACTTGGATGAGTTCACCCAATTTTATAACGCCATGACAGCCAGAGAGG
AGATCAAAGAGCTGTTCAACAGATGGAAGAGTGATGACCCCGATCCACCA
AACGTCTGCGGGTATGATGAGGACGGAGATAACATGCATATGAGGGTGCA
TGAACTGATGGAGTTCCTTGCCGACATCGCTAGGGGATGGGTTACTGGCA
TACAGCATCTCATGCGCGCACGAAAGTCGGAGACTATCATTGACAAACGC
AAAAGGTGGATTTTAGAGTACTTCCACAAGGGAGGGAACACGGACGATAG
TCTTGATTCCAAAGAAACGAAGGCGGTCCTGGCACAGATGAACATCCAAA
TAAAAGAGTCTCAGATCGATACGCTCATGCAGAAACTAGACAAAGATCGG
AACGGTACATGGGACTTGGATGAGTTCACCCAATTTTATAACGCCATGAC
AGCCAGAGAGGAGATCAAAGAGCTGTTCAACAGATGGAAGAGTGATGACC
CCGATCCACCAAACGTCTGCGGGTATGATGAGGACGGAGATAACATGCAT
ATGAGGGTGCATGAACTGATGGAGTTCCTTGCCGACATCGCTAGGGGATG
GGTTACTGGCATACAGCATCTCATGCGCGCACGAAAGTCGGAGACTATCA
TTGACAAACGCAAAAGGTGGATTTTAGAGTACTTCCACAAGGGAGGGAAC
ACGGACGATAGTCTTGATTCCAAAGAAACGAAGGCGGTCCTGGCACAGAT
GAACATCCAAATAAAAGAGTCTCAGATCGATACGCTCATGCAGAAACTAG
ACAAAGATCGGAACGGTACATGGGACTTGGATGAGTTCACCCAATTTTAT
AACGCCATGACAGCCAGAGAGGAGATCAAAGAGCTGTTCAACAGATGGAA
GAGTGATGACCCCGATCCACCAAACGTCTGCGGGTATGATGAGGACGGAG
ATAACATGCATATGAGGGTGCATGAACTGATGGAGTTCCTTGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000015 | genome | Sc0000015:2799694..2801326 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88199_cuf0 |
| Biotype | protein_coding |
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