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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88470_cuf0 >transcript:BL88470_cuf0-protein ID=transcript:BL88470_cuf0-protein|Name=transcript:BL88470_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=457bp
EICDAINDLSNGKASDVQGISAEHLKNAGPQLPVLLSFLISSMLRHAYVP
PSILNVVLVPVLKKPSCNASNKDSYRPIAIASPLLKVIESVLLTYLDDFL
CSPSNQFGFKKKHGTDLCIFALKEIIQYYRQRGSPVFACFLDASKAFDRV
NHWTLFKKLMDRGVPMYLVRFLVVWYSTLSFCVRWGHTLSDTFTAMNGLP
QGSILSPILFNVYVSDLSTELLRSGVGCYVGDTLVNHLMYADDICLVCPS
VKALQRLISICELSGADIDMLFNESKTLCMYFPCRRFRMSMPLPPLMLYG
TALKYASSTTYLGYIITPDLSDDAAIRAHIRGFYSRANSLLRRFRYCSAA
VKSELFSAYCSPMYCAQIWSNYSVSAISKLRVAYHSAMKMLFSVGRHTST
SWLFVNNRTDMFDARRRKVTYSFVTRLLSSDNDIIRVLVHSDGFCHSTFW
RHYVKYL Run BLAST on NCBI mRNA from alignment at Sc0000004:3972416..3973859- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88470_cuf0 ID=transcript:BL88470_cuf0|Name=transcript:BL88470_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1444bp|location=Sequence derived from alignment at Sc0000004:3972416..3973859- (Branchiostoma lanceolatum)
GAGATATGTGATGCTATCAATGACTTATCCAATGGGAAGGCTAGTGACGT
GCAGGGCATTTCAGCTGAGCATCTCAAGAACGCCGGGCCCCAACTACCCG
TTCTGCTTTCATTTTTAATTTCCTCTATGCTTAGACACGCCTATGTGCCA
CCTAGCATTCTGAACGTTGTACTTGTCCCTGTATTGAAGAAGCCCAGCTG
TAATGCTTCGAACAAGGACAGTTATCGTCCGATTGCAATTGCCAGCCCCT
TGTTAAAAGTTATCGAATCTGTACTATTGACATACCTTGACGATTTCCTA
TGCTCCCCGAGCAACCAGTTCGGATTTAAGAAGAAACATGGAACTGATCT
ATGTATATTTGCCCTCAAAGAAATTATTCAGTATTATCGACAAAGGGGCT
CTCCTGTATTTGCATGTTTTCTGGACGCATCCAAAGCGTTTGACCGTGTG
AACCACTGGACATTGTTTAAAAAACTTATGGATCGAGGGGTTCCGATGTA
CCTAGTTAGATTCCTGGTCGTGTGGTATAGTACGTTGTCATTCTGTGTCC
GGTGGGGCCACACCCTCTCGGATACATTTACCGCTATGAATGGTTTGCCT
CAAGGCAGCATATTGTCACCAATCTTGTTCAATGTGTATGTATCCGATTT
GAGTACCGAGCTACTGAGGTCTGGAGTTGGTTGCTATGTTGGGGACACCT
TAGTCAACCACTTGATGTACGCGGATGACATTTGCCTCGTCTGTCCGTCT
GTTAAAGCGTTGCAGAGACTGATCAGTATTTGTGAGCTATCTGGAGCGGA
TATTGACATGTTGTTTAATGAATCGAAAACACTATGTATGTACTTTCCGT
GTCGCCGCTTCCGCATGAGTATGCCTTTGCCGCCGCTGATGCTGTACGGT
ACCGCCTTAAAGTATGCCTCTTCTACCACATATCTTGGGTATATAATTAC
CCCTGATCTTTCGGATGACGCAGCAATCCGAGCTCACATCAGAGGCTTTT
ATTCTCGGGCAAACTCACTCCTCCGGCGGTTTCGTTACTGCTCAGCGGCG
GTAAAAAGTGAGTTGTTCTCAGCGTATTGCTCCCCGATGTATTGTGCCCA
AATCTGGAGTAATTACAGCGTGAGTGCGATCTCCAAGCTACGAGTGGCTT
ACCACAGCGCAATGAAAATGCTCTTTTCCGTCGGCAGGCATACAAGCACT
AGTTGGTTGTTTGTGAATAACCGGACCGACATGTTTGACGCAAGGCGTCG
CAAGGTCACCTACTCATTTGTAACACGCCTGCTGTCGTCTGACAATGATA
TAATTAGAGTGCTTGTACACTCGGACGGCTTTTGCCATAGCACATTCTGG
CGACATTATGTAAAGTATTTGTAAGTGTAGCTTTGTAAATCTTTGTTCTG
TGTCTGTTTTTATGGGCCATGGGCCTGATACAAATAAATAAATA Coding sequence (CDS) from alignment at Sc0000004:3972416..3973859- >transcript:BL88470_cuf0 ID=transcript:BL88470_cuf0|Name=transcript:BL88470_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1374bp|location=Sequence derived from alignment at Sc0000004:3972416..3973859- (Branchiostoma lanceolatum)
GAGATATGTGATGCTATCAATGACTTATCCAATGGGAAGGCTAGTGACGT
GCAGGGCATTTCAGCTGAGCATCTCAAGAACGCCGGGCCCCAACTACCCG
TTCTGCTTTCATTTTTAATTTCCTCTATGCTTAGACACGCCTATGTGCCA
CCTAGCATTCTGAACGTTGTACTTGTCCCTGTATTGAAGAAGCCCAGCTG
TAATGCTTCGAACAAGGACAGTTATCGTCCGATTGCAATTGCCAGCCCCT
TGTTAAAAGTTATCGAATCTGTACTATTGACATACCTTGACGATTTCCTA
TGCTCCCCGAGCAACCAGTTCGGATTTAAGAAGAAACATGGAACTGATCT
ATGTATATTTGCCCTCAAAGAAATTATTCAGTATTATCGACAAAGGGGCT
CTCCTGTATTTGCATGTTTTCTGGACGCATCCAAAGCGTTTGACCGTGTG
AACCACTGGACATTGTTTAAAAAACTTATGGATCGAGGGGTTCCGATGTA
CCTAGTTAGATTCCTGGTCGTGTGGTATAGTACGTTGTCATTCTGTGTCC
GGTGGGGCCACACCCTCTCGGATACATTTACCGCTATGAATGGTTTGCCT
CAAGGCAGCATATTGTCACCAATCTTGTTCAATGTGTATGTATCCGATTT
GAGTACCGAGCTACTGAGGTCTGGAGTTGGTTGCTATGTTGGGGACACCT
TAGTCAACCACTTGATGTACGCGGATGACATTTGCCTCGTCTGTCCGTCT
GTTAAAGCGTTGCAGAGACTGATCAGTATTTGTGAGCTATCTGGAGCGGA
TATTGACATGTTGTTTAATGAATCGAAAACACTATGTATGTACTTTCCGT
GTCGCCGCTTCCGCATGAGTATGCCTTTGCCGCCGCTGATGCTGTACGGT
ACCGCCTTAAAGTATGCCTCTTCTACCACATATCTTGGGTATATAATTAC
CCCTGATCTTTCGGATGACGCAGCAATCCGAGCTCACATCAGAGGCTTTT
ATTCTCGGGCAAACTCACTCCTCCGGCGGTTTCGTTACTGCTCAGCGGCG
GTAAAAAGTGAGTTGTTCTCAGCGTATTGCTCCCCGATGTATTGTGCCCA
AATCTGGAGTAATTACAGCGTGAGTGCGATCTCCAAGCTACGAGTGGCTT
ACCACAGCGCAATGAAAATGCTCTTTTCCGTCGGCAGGCATACAAGCACT
AGTTGGTTGTTTGTGAATAACCGGACCGACATGTTTGACGCAAGGCGTCG
CAAGGTCACCTACTCATTTGTAACACGCCTGCTGTCGTCTGACAATGATA
TAATTAGAGTGCTTGTACACTCGGACGGCTTTTGCCATAGCACATTCTGG
CGACATTATGTAAAGTATTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:3972416..3973859 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88470_cuf0 |
| Biotype | protein_coding |
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