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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90272_cuf0 >transcript:BL90272_cuf0-protein ID=transcript:BL90272_cuf0-protein|Name=transcript:BL90272_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=245bp
STTSVDTTHTTDLPADVCCRCRRNSCSRMADPPSYMYMTRTKDSPAFSNR
RETSGEEEKKIVFGGTGSGPGKFKTNRGVVVSANNEIFVTDMHNKRVQFF
RLDGTYLGNFSTVVPGENGSAMLPHDIAIDGKSNLWVVGKVLHPTQGRAV
HVVQYSRDGQSCTNFDMVWSKESCNRKLAIAVDTRKNIIILVDQCMLYKF
YSDGGLYKGLTTHEPLVSYVTVDKESNILIARDDRAGYCVHVWKW Run BLAST on NCBI mRNA from alignment at Sc0000214:181410..182751+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90272_cuf0 ID=transcript:BL90272_cuf0|Name=transcript:BL90272_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1342bp|location=Sequence derived from alignment at Sc0000214:181410..182751+ (Branchiostoma lanceolatum)
GTCGACCACATCTGTGGATACGACCCATACCACTGACCTGCCTGCCGACG
TCTGCTGTCGCTGCAGGCGCAATTCCTGCAGTAGAATGGCTGATCCACCC
TCGTACATGTACATGGTAAGCACGTGAGAAGGGTTATATATTTGCTCCTT
CCGTCGACGTTGTCTCATATTCCTATTCTTGTCTTCAACCCTGAACAAAG
ACAACATTTCATTATTATTCTTTTATGACAGACAAGGACTAAAGATTCGC
CAGCCTTCAGCAATCGAAGAGGTAAATAGTTTAGTATTTGAGTATACGGG
CCATAGGAGAACATTAACGCCGTAACTGTTCTCCTGTGGTCCGTATACTT
TCTACAACATACAGTCAAATAGAATTTCCCTTTTTTCAAAAAAGACATGT
GAGAAGTAGAATCACAAAGAAGTTGTCCTTAAGATTATGAACCTCAACTA
GTTTCATGAACTAAATGTTGTACTGGATATGTAACAATGTAACATGTAAC
AATCCCAATCTCAATTCACCAACCGAAAGTAACATTAAGATAAAATGCAC
TGTCATCGTGTGAACGAATGTGGCCGACTGGCTGACATTCTGGGTGCGAT
TTGTAGGATGAGTGACGTGAAAAGTTTTGTTTTTGATTTGTTTTTGTTAT
TGAATGTTCCAACCGAATTACTTGCAGAAAGAGTTTTTTTTGCATTTTCA
GAACTGACGTATGTTCACGGTTACAGCGAATCTTATGAAGATGTTAATAA
TCTATTGCAGAAACTTCGGGTGAAGAAGAGAAAAAGATAGTTTTTGGCGG
GACGGGATCCGGCCCGGGAAAATTCAAAACCAACCGTGGTGTGGTCGTAT
CAGCAAACAATGAGATATTTGTGACAGACATGCACAACAAACGAGTCCAA
TTTTTCAGACTGGATGGGACTTATCTCGGCAACTTTTCTACGGTAGTGCC
TGGTGAAAATGGAAGTGCAATGTTGCCCCACGATATTGCAATTGACGGAA
AATCTAATTTGTGGGTAGTGGGGAAAGTTCTCCATCCCACACAAGGACGT
GCTGTACATGTGGTGCAGTATAGTCGGGACGGCCAGTCATGCACCAATTT
CGACATGGTGTGGAGTAAGGAATCTTGCAATCGAAAACTTGCCATTGCGG
TGGACACACGCAAGAACATAATCATCTTGGTAGACCAGTGTATGCTTTAC
AAGTTTTACTCAGATGGAGGCCTTTATAAGGGACTTACAACTCATGAACC
TTTAGTATCATACGTTACAGTAGACAAAGAAAGTAATATCCTTATTGCTC
GTGACGATCGTGCTGGTTACTGTGTTCATGTCTGGAAGTGGC Coding sequence (CDS) from alignment at Sc0000214:181410..182751+ >transcript:BL90272_cuf0 ID=transcript:BL90272_cuf0|Name=transcript:BL90272_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2205bp|location=Sequence derived from alignment at Sc0000214:181410..182751+ (Branchiostoma lanceolatum)
TCGACCACATCTGTGGATACGACCCATACCACTGACCTGCCTGCCGACGT
CTGCTGTCGCTGCAGGCGCAATTCCTGCAGTAGAATGGCTGATCCACCCT
CGTACATGTACATGACAAGGACTAAAGATTCGCCAGCCTTCAGCAATCGA
AGAGAAACTTCGGGTGAAGAAGAGAAAAAGATAGTTTTTGGCGGGACGGG
ATCCGGCCCGGGAAAATTCAAAACCAACCGTGGTGTGGTCGTATCAGCAA
ACAATGAGATATTTGTGACAGACATGCACAACAAACGAGTCCAATTTTTC
AGACTGGATGGGACTTATCTCGGCAACTTTTCTACGGTAGTGCCTGGTGA
AAATGGAAGTGCAATGTTGCCCCACGATATTGCAATTGACGGAAAATCTA
ATTTGTGGGTAGTGGGGAAAGTTCTCCATCCCACACAAGGACGTGCTGTA
CATGTGGTGCAGTATAGTCGGGACGGCCAGTCATGCACCAATTTCGACAT
GGTGTGGAGTAAGGAATCTTGCAATCGAAAACTTGCCATTGCGGTGGACA
CACGCAAGAACATAATCATCTTGGTAGACCAGTGTATGCTTTACAAGTTT
TACTCAGATGGAGGCCTTTATAAGGGACTTACAACTCATGAACCTTTAGT
ATCATACGTTACAGTAGACAAAGAAAGTAATATCCTTATTGCTCGTGACG
ATCGTGCTGGTTACTGTGTTCATGTCTGGAAGTGGTCGACCACATCTGTG
GATACGACCCATACCACTGACCTGCCTGCCGACGTCTGCTGTCGCTGCAG
GCGCAATTCCTGCAGTAGAATGGCTGATCCACCCTCGTACATGTACATGA
CAAGGACTAAAGATTCGCCAGCCTTCAGCAATCGAAGAGAAACTTCGGGT
GAAGAAGAGAAAAAGATAGTTTTTGGCGGGACGGGATCCGGCCCGGGAAA
ATTCAAAACCAACCGTGGTGTGGTCGTATCAGCAAACAATGAGATATTTG
TGACAGACATGCACAACAAACGAGTCCAATTTTTCAGACTGGATGGGACT
TATCTCGGCAACTTTTCTACGGTAGTGCCTGGTGAAAATGGAAGTGCAAT
GTTGCCCCACGATATTGCAATTGACGGAAAATCTAATTTGTGGGTAGTGG
GGAAAGTTCTCCATCCCACACAAGGACGTGCTGTACATGTGGTGCAGTAT
AGTCGGGACGGCCAGTCATGCACCAATTTCGACATGGTGTGGAGTAAGGA
ATCTTGCAATCGAAAACTTGCCATTGCGGTGGACACACGCAAGAACATAA
TCATCTTGGTAGACCAGTGTATGCTTTACAAGTTTTACTCAGATGGAGGC
CTTTATAAGGGACTTACAACTCATGAACCTTTAGTATCATACGTTACAGT
AGACAAAGAAAGTAATATCCTTATTGCTCGTGACGATCGTGCTGGTTACT
GTGTTCATGTCTGGAAGTGGTCGACCACATCTGTGGATACGACCCATACC
ACTGACCTGCCTGCCGACGTCTGCTGTCGCTGCAGGCGCAATTCCTGCAG
TAGAATGGCTGATCCACCCTCGTACATGTACATGACAAGGACTAAAGATT
CGCCAGCCTTCAGCAATCGAAGAGAAACTTCGGGTGAAGAAGAGAAAAAG
ATAGTTTTTGGCGGGACGGGATCCGGCCCGGGAAAATTCAAAACCAACCG
TGGTGTGGTCGTATCAGCAAACAATGAGATATTTGTGACAGACATGCACA
ACAAACGAGTCCAATTTTTCAGACTGGATGGGACTTATCTCGGCAACTTT
TCTACGGTAGTGCCTGGTGAAAATGGAAGTGCAATGTTGCCCCACGATAT
TGCAATTGACGGAAAATCTAATTTGTGGGTAGTGGGGAAAGTTCTCCATC
CCACACAAGGACGTGCTGTACATGTGGTGCAGTATAGTCGGGACGGCCAG
TCATGCACCAATTTCGACATGGTGTGGAGTAAGGAATCTTGCAATCGAAA
ACTTGCCATTGCGGTGGACACACGCAAGAACATAATCATCTTGGTAGACC
AGTGTATGCTTTACAAGTTTTACTCAGATGGAGGCCTTTATAAGGGACTT
ACAACTCATGAACCTTTAGTATCATACGTTACAGTAGACAAAGAAAGTAA
TATCCTTATTGCTCGTGACGATCGTGCTGGTTACTGTGTTCATGTCTGGA
AGTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000214 | genome | Sc0000214:181410..182751 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90272_cuf0 |
| Biotype | protein_coding |
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