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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95101_evm2 >transcript:BL95101_evm2-protein ID=transcript:BL95101_evm2-protein|Name=transcript:BL95101_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=259bp
MRVAMLRQVSPRLQFLRHFVRGQLQRPLPVCRSGFCTSAALRSSGDGPPK
LYELRTYHVKPALFWEFMEILEEKVHLRMDMSKMVGFWRVDMGGLNQVVH
LWEYDDFAHRTAVARTRSAHTGWMSTLNKLLPTVEHQDNALLLPLPWSQL
KYPDTPGGWYELRSYRLTPGAHLQEPFRKTIQARAAFKYAELLGVWSSEF
GELNRVYMLWHHKDLDQRMLGRARAAQDPTIVATSRESAPSLVHQWSKIL
LPSSFSPMQ Run BLAST on NCBI mRNA from alignment at Sc0000005:7140860..7146149+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95101_evm2 ID=transcript:BL95101_evm2|Name=transcript:BL95101_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=5290bp|location=Sequence derived from alignment at Sc0000005:7140860..7146149+ (Branchiostoma lanceolatum)
ATGCGCGTAGCAATGCTGAGGCAGGTGTCGCCTCGACTGCAGTTCCTCAG
GCATTTTGTCAGGGGCCAGGTAAGGGAACAGTACGTTCGCCTTTTTCTTG
ATAGAAGTCGGAAGTTCAGAAGGGGGAGGGGGGCAGTTCAGTTGTCTCGC
AGTGGAGGGATGGAGGGACTCTGTTATTTGCCGCACTTCAGTTGACACAA
CTATACCGAAAGGGGACCTCGTCAAATGGGCAGCTGCAGGGACCTAAGAC
AAATACCCCCCCCCCCCCCCCNNNNNNNNNNNNNNAAATCCCCCCCCCCC
CCCCCATAATGAATGACTTTTGCAAATAAGTCGAGAAGACAATGTCACGT
TACCTGTAGCATTACTGCTCAGTGCTTACGATGTACAATCTCTGCGCAAA
GCTTAAGAAACCTGGTTGCCATAGAACTATTCAAAAGCCGTCTGGCATAC
TTAATAGGTGTTACATGGCCAGATAATCTCATCAGCCAAGGCCCAGCATG
CCATAGGGGGCCTTGGACGAATCACTCTCAGTCAAATCACATGACCTACT
TTTGTAACACTCCACCATCACATGTACAGAGCTAGAAGTTTGTAGATTAA
ATCTCAGTCCGCTCATCCAGTGTTTCCTAGTCATCAATCGTAGTCAACAG
AGCACTACAAGGAGTCAGGGAACACAACACAACAATAGGAAAGACAGAAA
TAATGTCAAACCCAGCACATCTTGTATGTGCAATGATTTCAAAGGTCGCT
AGGTGGCACAAATGTACTATTGCAATGCTATAAGCCCATCCGTCGATTCG
AGTACGCATGTGCAGTGTCAAAGTGAAGGCCCCTGGCTTGTAAACAGTTC
TCCTCTCGACATTGTGTCGATTTGCATAACATTTACGCCCAGACGGTTTG
TGTTTACGTCTCAGGGGCCTTCACCTTTGACACTGCACATGCGTACTCGA
ATCTACAAATGGGCTTCTTGCGTTGTATTGTTAGAACATCACTCGTGTTT
GTGTCAGCTATTCTAGTTGTGCTGTGAAAATTTGGTGCAACACATTGTTT
TTGCTACATGTATCGTTTCATTAAATAAATAAAAAAATTTAAACATTTTC
AAACGTACGCGTAAGATGCCAACTTCCTCCATCTGATATTACCCAAATCT
TGTTCCGAGCTCCAACGACCCACAAGTTTAATTTTCAGAACTAATGTGTC
AGATGTACAATAAACTAAAATGTGAACACTATAATATGTTCCGTTCATAT
TGTATCATTCAGCTTTGGGTGATTTCCTTTAGTTGTTGAATTGCTTTACG
TCGTGCTGTAGATACAAGTTATAAAATGTTTATAACATGTATCTAAAAGA
ACTTCCTTTTGGTACATGAATTCTTTGATTTAATCGAAAGGAAATCTTTT
TTAAGAAAGGGGGCCTCCCTTTTCATATGCTTTAGCCCAAACCTTGTTCC
CAGCTGCAGCGACCGCTTCCCGTCTGCAGGTCTGGGTTCTGCACCTCAGC
CGCCCTGCGGTCCAGCGGGGACGGCCCGCCCAAGCTGTACGAGCTGCGCA
CCTACCACGTCAAACCCGCGCTCTTCTGGGAGTTCATGGAGATCCTGGAG
GAGAAGGTGCACCTCCGCATGGACATGAGCAAAATGGTCGGCTTCTGGAG
GGTGGACATGGGGGGGTTGAACCAGGTGGTTCATCTGTGGGAGTACGGTA
AGTAGGCTCAGTTCTGGAGGGTGAACATGGGGGTTTTGAACCAGGTGGTT
CATATGTGGGAGTACGGTAAGTAGGCACAGTTCTGGAGGGTGGACATGGG
GGGTTTGAACCAGGTGGTTCATCTGTGGGAGTACGGTAAGTAGGCACAGT
TCTGGAGGGTGGACATGGGGGGTTGAACCAGGTTATTCATCTGTGGGAGT
ACGGTAAGTAGGCTCAGTTCTGGAGGGTGAACATGGGGGTTTTGAACCAG
GTGGTTCATATGTGGGAGTACGGTAAGTAGGCTCAGTTCTGGAGGGTGGA
CATGGGGCGGTTAAACCAGGTGGTTCATCTGTGGGAGTACGGTAAGTAGG
CTCAGTTCTGGAGGGTGGACATGGGGGGTTGAACCAGGTGGTTCATATGT
GGGAGTACGGTAAGTAGGCTCAGTTCTGGAGGGTGGACATGAGGTTTTTT
ATCCAGATGGTTCATCTGTGGGAGTTCGGTAAGTAGGCACAGTTCTGGAG
GGTGGACATGGGGGTTTGAACCAGGTGGTTCATATTTGGGAGTATGCCAG
AGATTTAAAGCACAAAAAAAGGAAGAAAGAAAGAAAGTACAGTACATGGC
GTCTGTCTTCTCTGTCACGACCAGAGGAAAATTAGCTCTTCTCCAGTGAG
CTAAACTGGTTAACGACGACTTTCACTTTACCGCCGCAGATGGGTGCTCC
CCTTCTAACCCTAGCTTGTGCCCCTCCCCGAACAGACGACTTCGCCCACA
GGACGGCGGTGGCGAGGACGCGGTCCGCACACACCGGGTGGATGAGCACG
CTGAACAAGCTGCTGCCGACGGTGGAGCACCAGGACAACGCGCTGCTGCT
GCCCCTGCCATGGAGCCAGCTCAAGTACCCCGACACGCCGGGAGGTGGGT
GGAACATAAGGGTGTCATAACACGACTATATAACTTGGAAGTTCTCTGTT
CTGTAATGAAGTAGAAATCCTTTTTGTCATGCCTGGGCCTCGATAACGTT
TGATATGGGTGTTCTGAGACTACTTGTGTCACTACTTGTATCACATGGGC
TTCCATTGAAGAATTTGAATACCAAATTATCTTTTTGGTTACTTTCTGTT
CATTATTCTATGTTATTTCCTTGTTATGTTATTTAGTCTGTTTATGTTAT
TCTGTGCAGGGCACGCCTGAAAAGCAGTGCGTTTAGTACTGAGTGCATCC
ACCCTGGATAAAGAAAACAGTAATAAATAGATGAATAAATAAATAAAATT
CGGACGTTGTTCAAACATTTTCTTTTATTTAGGACACCACATTTTCAAAA
ACCTTTGACGCATTTCATATTTAAATATATGGGGTTTTTTTCGAGTTGCT
ATGAGATAAAATGGTCCCATCCCTTCCGCGCGGGTCGAATCGGCCGTCGG
GCGAACCACCGCCGTTCGGTCTGGCTACTCTGGCACCCCGGGTTATACGG
AGTTATATGTTGGGTTGGGTGATACGGAGTTTTCAGTGTGGCATTGTCTG
TGTATGCTGCAGGTTGGTATGAGCTGAGGTCCTACCGGCTGACACCAGGG
GCACACCTGCAGGAGCCCTTCAGGAAGACCATCCAGGCTCGCGCCGCCTT
CAAGTACGCCGAGCTGCTGGGCGTGTGGAGCAGCGAGTTCGGCGAGCTTA
ACAGGGGTGAGTGGGGCTAGATACTACCGTCCTGCTCAACAGGGGTGAGT
GGGGCTAGATACTACCATCCTGCTCAACAGGGGTGAGTGGGGCTAGATAC
TACCGTCCTGCTCAACAGGGGTGAGTGGGGCTAGATACTACCGTCCTGCT
CAACAGGGGTGAGTGGGGCTAGATACTACCGTCCTGCTCAACAGGGGTGA
GTGGGGCTAGATACTACCATCCTGCTCAACAGGGGTGAGTGGGGCTAGAT
ACTACCATCCTGCTCAACAGGGGTGAGTGGGGCTAGATACTACCATCCTG
CTCAACAGGGGTGAGTGGGGCTAGATACTACCATCCTGCTCAACAGGGGT
GAGTGGGGCTAGATACTACCATCCTGCTCAACAGGGGTGAGTGGGGCTAG
ATACTACCATCCTGCTCAACAGGGGTGAGTGGGGCTAGATACTACCATCC
TGCTCAACAGGGGTGAGTGGGGCTAGATACTACCATCCTGCTCAACAGGG
GTGAGTGGGGCTAGATACTACCATCCTGCTCAACAGGGGTGAGTGGGGCT
AGATACTACCATCCTGCTCAACAGGGGTGAGTGGGGCTAGATACTACCAT
CCTGCTCAACAGGGGTGAGTGGGGCTAGATACTACCATCCTGCTCAACAG
GGGTGAGTGGGGCTAGATACTACCATCCTGCTCAACAGGGGTGAGTGGGG
CTAGATACTACCATCCTGCTCAACAGGGGTGAGTGGGGCTAGATACTACC
ATCCTGCTCAACAGGGGTGAGTGGGGCTAGATACTACCATCCTGCTCAAC
AGGGGTGAGTGGGGCTAGATACTACCATCCTGCTCAACAGGGGTGAGTGG
GGCTAGATACTACCGTCCTGCTCAACAGGGGTGAGTGGGGCTAGATACTA
CCGTCCTGCTCAACAGGGGTGAGTGGGGCCAGATCTACCATTCTGCTCAA
CAGGGGTGAGCACGATTAAATCATCCTGCAGTTAACAACTCTGTCTCTGT
AACAGAAGTTCCACCCCATTGCAGGTCCGAATCGAATCTCGACCCTGATA
TGAGAAGGAAACTCCACAGGCATGAGCATGTCCTAGATTGTGGTGATTCT
ATCTACACGTAGCAGTGAGTAATATCATCGGTGGTTAATGGTTACTTCAT
GGTTAAGTCAAGTCAAGTTGGTTAAAGAGGTCAGACATTTTAATCCCATA
CTGCTCCTCCCATGTCTGAGTCCCAGCTTGAATGTGTATGAATCAGTGAG
TTTTGCCTTCTCCCTAACCCCCAAACCAATACAACATCGGTGCCAAAAAG
CTACCTTAGCAGGCTGATTTTAAAGAACTATTGACAGCTGTCAGTGGCAC
TGTTGAGTTTTAACACAAACAGAAACAGCTGTATGAAAATGACAATGATC
ATTTTGTTGGGTAAAAGTTACCATATTCCGATACTTGTTTGTGTCACATG
AACAGTTTACATGCTGTGGCACCACAAGGACCTGGACCAAAGGATGCTGG
GAAGGGCCAGAGCTGCACAGGACCCTACCATTGTAGCAACTTGTAAGTTT
ATATCTGTAGCAGTTTGTAAGTCCACATCTGTAGCAGCTTGTAAGTCTGT
ATCTGTAGCAATTTTCTAAGTCCATAGCTGTAGCAATTTGTCAGTCTATA
TATTTGGCAATTTGTAAGCCTTTATTTGTAGGAGTTTGTAAATTCATATC
TGTAACAATTTGTTAATCCATATGGGTAGCAGCCCGCAATGTTGGCAGAA
AAACACATCTTACTTGCGTTCGAAGAAACCCAACACCTAATGCTAAACCA
TGCCAAATAATGTATCGTAATAAAGTGTACTTTGGTTTACATTTCTCCTT
TTCCTTTCCCCAGCCCGAGAGAGCGCCCCCAGCCTGGTCCACCAGTGGTC
CAAGATCCTCCTGCCAAGCTCCTTCTCACCCATGCAGTAG Coding sequence (CDS) from alignment at Sc0000005:7140860..7146149+ >transcript:BL95101_evm2 ID=transcript:BL95101_evm2|Name=transcript:BL95101_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=4680bp|location=Sequence derived from alignment at Sc0000005:7140860..7146149+ (Branchiostoma lanceolatum)
ATGCGCGTAGCAATGCTGAGGCAGGTGTCGCCTCGACTGCAGTTCCTCAG
GCATTTTGTCAGGGGCCAGCTGCAGCGACCGCTTCCCGTCTGCAGGTCTG
GGTTCTGCACCTCAGCCGCCCTGCGGTCCAGCGGGGACGGCCCGCCCAAG
CTGTACGAGCTGCGCACCTACCACGTCAAACCCGCGCTCTTCTGGGAGTT
CATGGAGATCCTGGAGGAGAAGGTGCACCTCCGCATGGACATGAGCAAAA
TGGTCGGCTTCTGGAGGGTGGACATGGGGGGGTTGAACCAGGTGGTTCAT
CTGTGGGAGTACGACGACTTCGCCCACAGGACGGCGGTGGCGAGGACGCG
GTCCGCACACACCGGGTGGATGAGCACGCTGAACAAGCTGCTGCCGACGG
TGGAGCACCAGGACAACGCGCTGCTGCTGCCCCTGCCATGGAGCCAGCTC
AAGTACCCCGACACGCCGGGAGGTTGGTATGAGCTGAGGTCCTACCGGCT
GACACCAGGGGCACACCTGCAGGAGCCCTTCAGGAAGACCATCCAGGCTC
GCGCCGCCTTCAAGTACGCCGAGCTGCTGGGCGTGTGGAGCAGCGAGTTC
GGCGAGCTTAACAGGGTTTACATGCTGTGGCACCACAAGGACCTGGACCA
AAGGATGCTGGGAAGGGCCAGAGCTGCACAGGACCCTACCATTGTAGCAA
CTTCCCGAGAGAGCGCCCCCAGCCTGGTCCACCAGTGGTCCAAGATCCTC
CTGCCAAGCTCCTTCTCACCCATGCAGTAGATGCGCGTAGCAATGCTGAG
GCAGGTGTCGCCTCGACTGCAGTTCCTCAGGCATTTTGTCAGGGGCCAGC
TGCAGCGACCGCTTCCCGTCTGCAGGTCTGGGTTCTGCACCTCAGCCGCC
CTGCGGTCCAGCGGGGACGGCCCGCCCAAGCTGTACGAGCTGCGCACCTA
CCACGTCAAACCCGCGCTCTTCTGGGAGTTCATGGAGATCCTGGAGGAGA
AGGTGCACCTCCGCATGGACATGAGCAAAATGGTCGGCTTCTGGAGGGTG
GACATGGGGGGGTTGAACCAGGTGGTTCATCTGTGGGAGTACGACGACTT
CGCCCACAGGACGGCGGTGGCGAGGACGCGGTCCGCACACACCGGGTGGA
TGAGCACGCTGAACAAGCTGCTGCCGACGGTGGAGCACCAGGACAACGCG
CTGCTGCTGCCCCTGCCATGGAGCCAGCTCAAGTACCCCGACACGCCGGG
AGGTTGGTATGAGCTGAGGTCCTACCGGCTGACACCAGGGGCACACCTGC
AGGAGCCCTTCAGGAAGACCATCCAGGCTCGCGCCGCCTTCAAGTACGCC
GAGCTGCTGGGCGTGTGGAGCAGCGAGTTCGGCGAGCTTAACAGGGTTTA
CATGCTGTGGCACCACAAGGACCTGGACCAAAGGATGCTGGGAAGGGCCA
GAGCTGCACAGGACCCTACCATTGTAGCAACTTCCCGAGAGAGCGCCCCC
AGCCTGGTCCACCAGTGGTCCAAGATCCTCCTGCCAAGCTCCTTCTCACC
CATGCAGTAGATGCGCGTAGCAATGCTGAGGCAGGTGTCGCCTCGACTGC
AGTTCCTCAGGCATTTTGTCAGGGGCCAGCTGCAGCGACCGCTTCCCGTC
TGCAGGTCTGGGTTCTGCACCTCAGCCGCCCTGCGGTCCAGCGGGGACGG
CCCGCCCAAGCTGTACGAGCTGCGCACCTACCACGTCAAACCCGCGCTCT
TCTGGGAGTTCATGGAGATCCTGGAGGAGAAGGTGCACCTCCGCATGGAC
ATGAGCAAAATGGTCGGCTTCTGGAGGGTGGACATGGGGGGGTTGAACCA
GGTGGTTCATCTGTGGGAGTACGACGACTTCGCCCACAGGACGGCGGTGG
CGAGGACGCGGTCCGCACACACCGGGTGGATGAGCACGCTGAACAAGCTG
CTGCCGACGGTGGAGCACCAGGACAACGCGCTGCTGCTGCCCCTGCCATG
GAGCCAGCTCAAGTACCCCGACACGCCGGGAGGTTGGTATGAGCTGAGGT
CCTACCGGCTGACACCAGGGGCACACCTGCAGGAGCCCTTCAGGAAGACC
ATCCAGGCTCGCGCCGCCTTCAAGTACGCCGAGCTGCTGGGCGTGTGGAG
CAGCGAGTTCGGCGAGCTTAACAGGGTTTACATGCTGTGGCACCACAAGG
ACCTGGACCAAAGGATGCTGGGAAGGGCCAGAGCTGCACAGGACCCTACC
ATTGTAGCAACTTCCCGAGAGAGCGCCCCCAGCCTGGTCCACCAGTGGTC
CAAGATCCTCCTGCCAAGCTCCTTCTCACCCATGCAGTAGATGCGCGTAG
CAATGCTGAGGCAGGTGTCGCCTCGACTGCAGTTCCTCAGGCATTTTGTC
AGGGGCCAGCTGCAGCGACCGCTTCCCGTCTGCAGGTCTGGGTTCTGCAC
CTCAGCCGCCCTGCGGTCCAGCGGGGACGGCCCGCCCAAGCTGTACGAGC
TGCGCACCTACCACGTCAAACCCGCGCTCTTCTGGGAGTTCATGGAGATC
CTGGAGGAGAAGGTGCACCTCCGCATGGACATGAGCAAAATGGTCGGCTT
CTGGAGGGTGGACATGGGGGGGTTGAACCAGGTGGTTCATCTGTGGGAGT
ACGACGACTTCGCCCACAGGACGGCGGTGGCGAGGACGCGGTCCGCACAC
ACCGGGTGGATGAGCACGCTGAACAAGCTGCTGCCGACGGTGGAGCACCA
GGACAACGCGCTGCTGCTGCCCCTGCCATGGAGCCAGCTCAAGTACCCCG
ACACGCCGGGAGGTTGGTATGAGCTGAGGTCCTACCGGCTGACACCAGGG
GCACACCTGCAGGAGCCCTTCAGGAAGACCATCCAGGCTCGCGCCGCCTT
CAAGTACGCCGAGCTGCTGGGCGTGTGGAGCAGCGAGTTCGGCGAGCTTA
ACAGGGTTTACATGCTGTGGCACCACAAGGACCTGGACCAAAGGATGCTG
GGAAGGGCCAGAGCTGCACAGGACCCTACCATTGTAGCAACTTCCCGAGA
GAGCGCCCCCAGCCTGGTCCACCAGTGGTCCAAGATCCTCCTGCCAAGCT
CCTTCTCACCCATGCAGTAGATGCGCGTAGCAATGCTGAGGCAGGTGTCG
CCTCGACTGCAGTTCCTCAGGCATTTTGTCAGGGGCCAGCTGCAGCGACC
GCTTCCCGTCTGCAGGTCTGGGTTCTGCACCTCAGCCGCCCTGCGGTCCA
GCGGGGACGGCCCGCCCAAGCTGTACGAGCTGCGCACCTACCACGTCAAA
CCCGCGCTCTTCTGGGAGTTCATGGAGATCCTGGAGGAGAAGGTGCACCT
CCGCATGGACATGAGCAAAATGGTCGGCTTCTGGAGGGTGGACATGGGGG
GGTTGAACCAGGTGGTTCATCTGTGGGAGTACGACGACTTCGCCCACAGG
ACGGCGGTGGCGAGGACGCGGTCCGCACACACCGGGTGGATGAGCACGCT
GAACAAGCTGCTGCCGACGGTGGAGCACCAGGACAACGCGCTGCTGCTGC
CCCTGCCATGGAGCCAGCTCAAGTACCCCGACACGCCGGGAGGTTGGTAT
GAGCTGAGGTCCTACCGGCTGACACCAGGGGCACACCTGCAGGAGCCCTT
CAGGAAGACCATCCAGGCTCGCGCCGCCTTCAAGTACGCCGAGCTGCTGG
GCGTGTGGAGCAGCGAGTTCGGCGAGCTTAACAGGGTTTACATGCTGTGG
CACCACAAGGACCTGGACCAAAGGATGCTGGGAAGGGCCAGAGCTGCACA
GGACCCTACCATTGTAGCAACTTCCCGAGAGAGCGCCCCCAGCCTGGTCC
ACCAGTGGTCCAAGATCCTCCTGCCAAGCTCCTTCTCACCCATGCAGTAG
ATGCGCGTAGCAATGCTGAGGCAGGTGTCGCCTCGACTGCAGTTCCTCAG
GCATTTTGTCAGGGGCCAGCTGCAGCGACCGCTTCCCGTCTGCAGGTCTG
GGTTCTGCACCTCAGCCGCCCTGCGGTCCAGCGGGGACGGCCCGCCCAAG
CTGTACGAGCTGCGCACCTACCACGTCAAACCCGCGCTCTTCTGGGAGTT
CATGGAGATCCTGGAGGAGAAGGTGCACCTCCGCATGGACATGAGCAAAA
TGGTCGGCTTCTGGAGGGTGGACATGGGGGGGTTGAACCAGGTGGTTCAT
CTGTGGGAGTACGACGACTTCGCCCACAGGACGGCGGTGGCGAGGACGCG
GTCCGCACACACCGGGTGGATGAGCACGCTGAACAAGCTGCTGCCGACGG
TGGAGCACCAGGACAACGCGCTGCTGCTGCCCCTGCCATGGAGCCAGCTC
AAGTACCCCGACACGCCGGGAGGTTGGTATGAGCTGAGGTCCTACCGGCT
GACACCAGGGGCACACCTGCAGGAGCCCTTCAGGAAGACCATCCAGGCTC
GCGCCGCCTTCAAGTACGCCGAGCTGCTGGGCGTGTGGAGCAGCGAGTTC
GGCGAGCTTAACAGGGTTTACATGCTGTGGCACCACAAGGACCTGGACCA
AAGGATGCTGGGAAGGGCCAGAGCTGCACAGGACCCTACCATTGTAGCAA
CTTCCCGAGAGAGCGCCCCCAGCCTGGTCCACCAGTGGTCCAAGATCCTC
CTGCCAAGCTCCTTCTCACCCATGCAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7140860..7146149 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95101_evm2 |
| Biotype | protein_coding |
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