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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95256_evm0 >transcript:BL95256_evm0-protein ID=transcript:BL95256_evm0-protein|Name=transcript:BL95256_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=451bp
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN
TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAA
NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT
SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDC
AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
DLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG
FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEGEE
Y Run BLAST on NCBI mRNA from alignment at Sc0000015:2251556..2255151+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95256_evm0 ID=transcript:BL95256_evm0|Name=transcript:BL95256_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3596bp|location=Sequence derived from alignment at Sc0000015:2251556..2255151+ (Branchiostoma lanceolatum)
ATGGTAAGTGTATTTGATTCCTTCTGTGAAATTTTTAGCGGGATTTGTCC
GGCCACTGAGGAGTAATACAACATTTTCTCCCGTCCCTCAGTGAGACATG
ATATTTTTCGACCAGACATTCGACAATTCAATCTAAAACGTGACATCAAA
ATGTAGGATATGATTTCCCGTTAATTTTGAGGTTGTGTTTGTGCCAGCAA
AACTGCCACGAACAACGAACGAGCGAAAAGGGAGGCCACACCTTGAAAAT
TTTCAGACTTTCCCTCCAAAAATGGCGGTGTTCCATTTTCTCATACTTCT
CTCTCTTTTTCCAGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGGT
GTCCAGATCGGTAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGAT
CCAGCCTGATGGCCAGATGCCGAGCGACAAGACTATCGGCGGTGGGGACG
ACTCCTTCAACACGTTCTTCAGCGAGACCGGCGCCGGCAAGCATGTGCCC
CGTGCCGTCTTCGTGGATCTGGAGCCCACCGTAGTCGGTAAGAATATTTT
CACCCGATTTTAAACAAATTTCTGACGATTGAGTAGTGGTTGAGGTATTT
TGCCCGGGTTTGAGTCAGATTTTTGACCGTTGGGGAAAAAATTATGGCGG
TTTCCTGCAAATTTTCCACGTCACTGTCTCGCGATTCAAATCACGTCCTG
TAACGGTGTCAACCTGAGGACGGGCCGCCATTTGCTTTTTGCCGGCATTC
CTAATTCCGCCACACCTATTTTCGCATGAAATATAATACCCCCGTTTTCG
TTCGGATATTGTGCTGATACTACGATTTCTCAGGGGAAAAATTTGAAATT
TTGTGAGTCATGCCCACACGGAGGTTGGTCATGCCCCAGTTTGGGAATGA
TGTCATGTCCTTTGCCCAAATATGGTCATGTTGACGGTGGCAGACTGAAC
ACGTGAATATTACCATGGGTGCCATCCAACTTCTACCGGGGCTCATACAA
TCACTACCCTAATTGGCCTTAAAAAAATATTTTAGGGTAGTGAGTGTAGG
AGCCCCGGTAGAAATAGAATGGCACCCAGGCTAATGAATATTGCCCATTG
CTGAAATATTTTTAAAGCCAGGCTTTTCCTTATGATTTTTATCTCCATGA
AAAATGGAGATATAGTTTTGTGCGTGTGTGTGTGTGTGTTTGCCTTTAAT
AAAAAGAAGTTGTGATCACACTTGACATTTGTTAAGTTAAAAGGAGGAGG
GCTTTTATAAGCCTTGCAGGCTTCTTTCCTCCTCCTGCACATTCTTTTGT
ACTTTCAATTAATTAATTGTTGTTTTTTTTGCTTTTATGTGCGAATAAAT
AAAACAAACAAAAGTTCTACTGCAGTACCAAGGTCACATCATGGGGCCCA
AAATCGACCTTGACCTTTGTGTCCCCAACACCCACCCACATACCAAATAA
GGTAATCCATCCAGAGGTTCTTGAGTTATGCTGACTACAACAGTCCGGAA
ACACACACAGACACACACTCGAAACTACATCTCCATTTTTCATGGAGATA
ACAACTGGTCAGATCAGCATAGGTCCGCAGTAATGTGTAAGAGCATGACT
TCTTCGTAACAATGAACATGGACAGTTTTGCACAAAGAATTGGAAAGCAA
AACTATACTATATGGGTAAGTTTGGATATCACTGGTCATTTAAAGGATTG
GACTGTTCTTGAATCTGTTTGCTCTTGTTCTGCTGGTGGCCAATGAGTGT
TTCTGTCTAGTGTCTCTGGTGCTGATGTCATCATGAGAAGGGGGCAGGCA
GTTCCTGAAGACGGGATTTTAGCATAAGCAGTGCAAAGAAAAGAAGGACT
TTGCATTTTAGGGGTTTAGAGTCATGTGATTTTCTTCAGTCCACCAGGCA
AGGGTGTTAATGTCGTCTTGGATAGATGTCGGTTTCGTCACAATTCTGAT
AAGGACATGTTGTCAACATATTTGTAGGTGTCTGCTGTTGTCTCGTTGGC
AGGGACAGCATCGTTTACAAGGGCTAAGAAAACCATCGGCCCAATTTAGT
GCCTTGTGGAACACCACATGTTAGCGCTTGCCAGTCCGACAATACTCCAC
GGTACCTGACTCTCTGTCGCCAACCCAGGGTGAAGCTGCTGACCCATGGC
ACGAGTGATGGCGTTTATTGATGGCGGTCTTGTGGTGTACGGAGTTGAAA
GCACGCAAGGAGTCGGTAAGTACAAGTGTAGTCACTTGGCCAGGTTTGTC
TGCTGCTTCTACCAACGTGTGCCTGGGGAGAGTCATGTAATGTGTGGTAG
AGTGAACCATATTGTTGTGGATTAATGCTTGGGAGAATATCACAAAGACA
CCAGTCCATGACAAATCAAATTACATTTAGTTCTCCTCTTGAGTTGATTA
GTGTGTGTGCTGCTTGCATACCAATGAGTTTTGCCATACTTAATGTAATT
GCTTTGTATTCCCCAGATGAGGTCCGTACCGGCACATACCGCCAGCTGTT
CCACCCTGAGCAGCTCATCACCGGTAAGGAGGATGCCGCCAACAACTACG
CCCGTGGCCACTACACCATTGGCAAGGAGATCGTCGACTTGGTCCTGGAC
CGCATCCGTAAGCTGGCTGATCAGTGCACTGGTCTGCAGGGCTTCCTCAT
CTTCCACTCCTTCGGCGGTGGCACCGGCTCTGGCTTCACCTCCCTGTTGA
TGGAACGTCTGTCCGTCGACTACGGCAAGAAGTCCAAGCTCGAGTTCGCC
ATCTACCCAGCCCCTCAGGTGTCCACTGCTGTGGTTGAGCCCTACAACTC
CATCCTGACCACCCATACCACCCTGGAGCACTCCGACTGCGCCTTCATGG
TCGACAACGAGGCTATCTACGACATCTGCCGCCGTAACCTGGACATCGAG
CGCCCGACCTACACCAACCTCAACCGTCTGATCGGCCAGATCGTCTCCTC
AATCACCGCATCCCTCCGCTTCGACGGTGCCCTGAACGTGGATCTCACTG
AGTTCCAGACCAACTTGGTGCCCTACCCACGTATCCACTTCCCCCTGGCC
ACCTACGCCCCAGTCATCTCCGCAGAGAAGGCCTACCACGAGCAGCTGTC
CGTTGCCGAGATCACCAACGCCTGCTTCGAGCCAGCTAACCAGTTGGTGA
AGTGCGATCCTCGTCATGGCAAGTATATGGCCTGCTGCATGTTGTACCGT
GGAGACGTCGTGCCAAAGGACGTCAACGCTGCCATCGCCACCATCAAGAC
CAAGCGTACCATCCAATTCGTCGACTGGTGCCCCACCGGTTTCAAGGTCG
GCATCAACTACCAGCCACCCACCGTGGTGCCCGGCGGTGACCTGGCCAAG
GTGCAGCGTGCCGTGTGCATGTTGAGCAACACCACCGCCATCGCTGAGGC
CTGGGCCCGTCTCGACCACAAGTTCGATCTGATGTACGCCAAGCGTGCCT
TCGTGCACTGGTACGTCGGTGAGGGTATGGAGGAGGGAGAGTTCTCCGAG
GCCCGTGAAGATTTGGCCGCCCTGGAGAAGGATTACGAAGAGGTCGGTGT
CGACTCCGTGGAAGGCGAGGGCGAGGAGGAGGGAGAGGAGTATTAG Coding sequence (CDS) from alignment at Sc0000015:2251556..2255151+ >transcript:BL95256_evm0 ID=transcript:BL95256_evm0|Name=transcript:BL95256_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4068bp|location=Sequence derived from alignment at Sc0000015:2251556..2255151+ (Branchiostoma lanceolatum)
ATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGGTGTCCAGATCGG
TAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGATCCAGCCTGATG
GCCAGATGCCGAGCGACAAGACTATCGGCGGTGGGGACGACTCCTTCAAC
ACGTTCTTCAGCGAGACCGGCGCCGGCAAGCATGTGCCCCGTGCCGTCTT
CGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCGTACCGGCACATACC
GCCAGCTGTTCCACCCTGAGCAGCTCATCACCGGTAAGGAGGATGCCGCC
AACAACTACGCCCGTGGCCACTACACCATTGGCAAGGAGATCGTCGACTT
GGTCCTGGACCGCATCCGTAAGCTGGCTGATCAGTGCACTGGTCTGCAGG
GCTTCCTCATCTTCCACTCCTTCGGCGGTGGCACCGGCTCTGGCTTCACC
TCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGCAAGAAGTCCAAGCT
CGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCACTGCTGTGGTTGAGC
CCTACAACTCCATCCTGACCACCCATACCACCCTGGAGCACTCCGACTGC
GCCTTCATGGTCGACAACGAGGCTATCTACGACATCTGCCGCCGTAACCT
GGACATCGAGCGCCCGACCTACACCAACCTCAACCGTCTGATCGGCCAGA
TCGTCTCCTCAATCACCGCATCCCTCCGCTTCGACGGTGCCCTGAACGTG
GATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGTATCCACTT
CCCCCTGGCCACCTACGCCCCAGTCATCTCCGCAGAGAAGGCCTACCACG
AGCAGCTGTCCGTTGCCGAGATCACCAACGCCTGCTTCGAGCCAGCTAAC
CAGTTGGTGAAGTGCGATCCTCGTCATGGCAAGTATATGGCCTGCTGCAT
GTTGTACCGTGGAGACGTCGTGCCAAAGGACGTCAACGCTGCCATCGCCA
CCATCAAGACCAAGCGTACCATCCAATTCGTCGACTGGTGCCCCACCGGT
TTCAAGGTCGGCATCAACTACCAGCCACCCACCGTGGTGCCCGGCGGTGA
CCTGGCCAAGGTGCAGCGTGCCGTGTGCATGTTGAGCAACACCACCGCCA
TCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGATCTGATGTACGCC
AAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTATGGAGGAGGGAGA
GTTCTCCGAGGCCCGTGAAGATTTGGCCGCCCTGGAGAAGGATTACGAAG
AGGTCGGTGTCGACTCCGTGGAAGGCGAGGGCGAGGAGGAGGGAGAGGAG
TATTAGATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGGTGTCCA
GATCGGTAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGATCCAGC
CTGATGGCCAGATGCCGAGCGACAAGACTATCGGCGGTGGGGACGACTCC
TTCAACACGTTCTTCAGCGAGACCGGCGCCGGCAAGCATGTGCCCCGTGC
CGTCTTCGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCGTACCGGCA
CATACCGCCAGCTGTTCCACCCTGAGCAGCTCATCACCGGTAAGGAGGAT
GCCGCCAACAACTACGCCCGTGGCCACTACACCATTGGCAAGGAGATCGT
CGACTTGGTCCTGGACCGCATCCGTAAGCTGGCTGATCAGTGCACTGGTC
TGCAGGGCTTCCTCATCTTCCACTCCTTCGGCGGTGGCACCGGCTCTGGC
TTCACCTCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGCAAGAAGTC
CAAGCTCGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCACTGCTGTGG
TTGAGCCCTACAACTCCATCCTGACCACCCATACCACCCTGGAGCACTCC
GACTGCGCCTTCATGGTCGACAACGAGGCTATCTACGACATCTGCCGCCG
TAACCTGGACATCGAGCGCCCGACCTACACCAACCTCAACCGTCTGATCG
GCCAGATCGTCTCCTCAATCACCGCATCCCTCCGCTTCGACGGTGCCCTG
AACGTGGATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGTAT
CCACTTCCCCCTGGCCACCTACGCCCCAGTCATCTCCGCAGAGAAGGCCT
ACCACGAGCAGCTGTCCGTTGCCGAGATCACCAACGCCTGCTTCGAGCCA
GCTAACCAGTTGGTGAAGTGCGATCCTCGTCATGGCAAGTATATGGCCTG
CTGCATGTTGTACCGTGGAGACGTCGTGCCAAAGGACGTCAACGCTGCCA
TCGCCACCATCAAGACCAAGCGTACCATCCAATTCGTCGACTGGTGCCCC
ACCGGTTTCAAGGTCGGCATCAACTACCAGCCACCCACCGTGGTGCCCGG
CGGTGACCTGGCCAAGGTGCAGCGTGCCGTGTGCATGTTGAGCAACACCA
CCGCCATCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGATCTGATG
TACGCCAAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTATGGAGGA
GGGAGAGTTCTCCGAGGCCCGTGAAGATTTGGCCGCCCTGGAGAAGGATT
ACGAAGAGGTCGGTGTCGACTCCGTGGAAGGCGAGGGCGAGGAGGAGGGA
GAGGAGTATTAGATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGG
TGTCCAGATCGGTAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGA
TCCAGCCTGATGGCCAGATGCCGAGCGACAAGACTATCGGCGGTGGGGAC
GACTCCTTCAACACGTTCTTCAGCGAGACCGGCGCCGGCAAGCATGTGCC
CCGTGCCGTCTTCGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCGTA
CCGGCACATACCGCCAGCTGTTCCACCCTGAGCAGCTCATCACCGGTAAG
GAGGATGCCGCCAACAACTACGCCCGTGGCCACTACACCATTGGCAAGGA
GATCGTCGACTTGGTCCTGGACCGCATCCGTAAGCTGGCTGATCAGTGCA
CTGGTCTGCAGGGCTTCCTCATCTTCCACTCCTTCGGCGGTGGCACCGGC
TCTGGCTTCACCTCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGCAA
GAAGTCCAAGCTCGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCACTG
CTGTGGTTGAGCCCTACAACTCCATCCTGACCACCCATACCACCCTGGAG
CACTCCGACTGCGCCTTCATGGTCGACAACGAGGCTATCTACGACATCTG
CCGCCGTAACCTGGACATCGAGCGCCCGACCTACACCAACCTCAACCGTC
TGATCGGCCAGATCGTCTCCTCAATCACCGCATCCCTCCGCTTCGACGGT
GCCCTGAACGTGGATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCC
ACGTATCCACTTCCCCCTGGCCACCTACGCCCCAGTCATCTCCGCAGAGA
AGGCCTACCACGAGCAGCTGTCCGTTGCCGAGATCACCAACGCCTGCTTC
GAGCCAGCTAACCAGTTGGTGAAGTGCGATCCTCGTCATGGCAAGTATAT
GGCCTGCTGCATGTTGTACCGTGGAGACGTCGTGCCAAAGGACGTCAACG
CTGCCATCGCCACCATCAAGACCAAGCGTACCATCCAATTCGTCGACTGG
TGCCCCACCGGTTTCAAGGTCGGCATCAACTACCAGCCACCCACCGTGGT
GCCCGGCGGTGACCTGGCCAAGGTGCAGCGTGCCGTGTGCATGTTGAGCA
ACACCACCGCCATCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGAT
CTGATGTACGCCAAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTAT
GGAGGAGGGAGAGTTCTCCGAGGCCCGTGAAGATTTGGCCGCCCTGGAGA
AGGATTACGAAGAGGTCGGTGTCGACTCCGTGGAAGGCGAGGGCGAGGAG
GAGGGAGAGGAGTATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000015 | genome | Sc0000015:2251556..2255151 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95256_evm0 |
| Biotype | protein_coding |
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