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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95258_evm0 >transcript:BL95258_evm0-protein ID=transcript:BL95258_evm0-protein|Name=transcript:BL95258_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=451bp
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN
TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAA
NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT
SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDC
AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
DLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG
FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVDEGGEEEGEE
Y Run BLAST on NCBI mRNA from alignment at Sc0000015:4174680..4177030+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95258_evm0 ID=transcript:BL95258_evm0|Name=transcript:BL95258_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2351bp|location=Sequence derived from alignment at Sc0000015:4174680..4177030+ (Branchiostoma lanceolatum)
ATGGTAAGTTCTGTTATATCCCACTATGTTTTAAAGAGATTTTTATCACA
TTCGGTGAACTTAGCGATGCTAAATATTACGATTATAGATAGTAATTTCC
GCCAAGCATCCACCCAAGGCCCAGGGCCCGGCTTGGCTGCAGGCATATTT
CTTCAGAAAGAAAGGAATTACTTTGGAAATGCTGTCAGTATCCCTTAATA
ATAGAATTAAGTTAAAATTCTTCACTTTACGGACGTTGGGTTAAGGTCAT
CACAAAATTCCTGTATCCTCCCGTCGTAGTGTATCAAAACGAATCGATAT
TTTTTCACCGGGAACCTCCTTTCCCAGATATGGCCTGTTCAAAATCATGT
GCAGATACGATTTTCAATATTCTTCTCTCTCTGTTTCCAGCGTGAGTGCA
TCTCTATCCACGTCGGCCAGGCTGGTGTCCAGATCGGTAACGCCTGCTGG
GAGCTGTACTGCTTGGAGCACGGGATCCAGCCTGATGGCCAGATGCCGAG
CGACAAGACCATCGGCGGCGGGGACGACTCCTTCAACACGTTCTTCAGCG
AGACTGGCGCCGGCAAACATGTGCCCCGTGCCGTCTTCGTGGATCTGGAG
CCCACCGTAGTCGGTGAGAACATTTTCAAAAAAAATCTGTTAAAAACGGT
CTAGATTCGAGTAATTTTTCATCATTTTGAAGTAATTTACCCGGGACTGT
CGGGTAGTTACTTTTTATTAGCATTAGCTGAAGTTTTATCTACAATGGGG
TTGAGGTGTGTTTTTTGTGTACTCCTTTATTTACTGTGTTGTTTCAGTAG
TCAGGGGTAACCGTTGATCCACCTGTAATCTGTCAGTCCTGTGTAATCTG
TCAGGCCACCTGTAATTTGCATATGAATAGCAGGTTTTCATGCCCTATGC
CCAGGAGGCACAAACGGTTGTCACAGTAGAGAATTTTTAATCAGCCCAAA
CACAACTGGTTTACTTCACCCTATGTAGGGTACACAGAATCTATATCTGT
TGAACCTTTGTGCTTTGGTTTTCATTTGTTTATCCCAGTATTATATTGTC
TATACGTGGTTTCACTTTAATTTGTTAAACAGTGTGGAAACTGGAAAGGC
TTTTTTAAGTTCTTCGTCTAGTTGTCAAATGAAATTGATCTTATGTTTAA
TTACTTTATGTCCCAGTCTGCTTGTCATTCATGATCCTAAACTAATGTGA
TTGCTTTCTGCTATTCCCCAGATGAGGTCCGTACCGGCACATACCGCCAG
CTGTTCCACCCCGAGCAGCTCATCACTGGTAAGGAGGATGCCGCCAACAA
CTACGCCCGTGGCCACTACACCATCGGCAAGGAGATCGTCGACTTGGTCC
TGGACCGCATCCGTAAGCTGGCTGACCAGTGCACTGGTCTGCAGGGCTTC
CTCATCTTCCACTCTTTCGGCGGTGGCACCGGCTCTGGCTTCACCTCCCT
GTTGATGGAACGTCTGTCCGTCGACTACGGAAAGAAGTCCAAGCTTGAGT
TCGCCATCTACCCAGCCCCTCAGGTGTCCACAGCCGTGGTTGAGCCCTAC
AACTCCATCCTGACAACCCATACCACCCTGGAGCACTCCGACTGTGCCTT
CATGGTCGACAACGAGGCCATCTACGACATCTGCCGCCGTAACCTGGACA
TCGAGCGCCCGACCTACACCAACCTCAACCGTCTGATCGGCCAGATCGTC
TCCTCCATCACCGCATCCCTCCGCTTCGACGGTGCCCTGAACGTGGATCT
CACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGTATCCACTTCCCCC
TGGCCACCTACGCCCCAGTCATCTCTGCCGAGAAGGCCTACCACGAGCAG
CTGTCCGTTGCTGAGATCACCAACGCCTGCTTCGAGCCAGCCAACCAGAT
GGTGAAGTGCGATCCCCGTCACGGCAAGTACATGGCCTGCTGTATGCTGT
ACCGTGGAGATGTCGTGCCAAAGGACGTCAACGCTGCCATCGCCACCATC
AAGACCAAGCGCACCATCCAGTTCGTCGACTGGTGCCCCACCGGCTTCAA
GGTCGGCATCAACTACCAGCCACCCACCGTGGTGCCCGGCGGTGACTTGG
CCAAGGTGCAGCGTGCCGTATGCATGTTGAGCAACACCACCGCCATCGCT
GAGGCCTGGGCCCGTCTCGACCACAAGTTCGATCTGATGTACGCCAAGCG
TGCCTTCGTGCACTGGTACGTCGGTGAGGGTATGGAGGAGGGAGAGTTCT
CTGAGGCCCGTGAAGATTTGGCCGCCCTGGAGAAGGATTACGAGGAGGTC
GGTGTTGACTCCGTGGATGAGGGGGGCGAGGAGGAGGGAGAGGAGTATTA
G Coding sequence (CDS) from alignment at Sc0000015:4174680..4177030+ >transcript:BL95258_evm0 ID=transcript:BL95258_evm0|Name=transcript:BL95258_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=4068bp|location=Sequence derived from alignment at Sc0000015:4174680..4177030+ (Branchiostoma lanceolatum)
ATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGGTGTCCAGATCGG
TAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGATCCAGCCTGATG
GCCAGATGCCGAGCGACAAGACCATCGGCGGCGGGGACGACTCCTTCAAC
ACGTTCTTCAGCGAGACTGGCGCCGGCAAACATGTGCCCCGTGCCGTCTT
CGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCGTACCGGCACATACC
GCCAGCTGTTCCACCCCGAGCAGCTCATCACTGGTAAGGAGGATGCCGCC
AACAACTACGCCCGTGGCCACTACACCATCGGCAAGGAGATCGTCGACTT
GGTCCTGGACCGCATCCGTAAGCTGGCTGACCAGTGCACTGGTCTGCAGG
GCTTCCTCATCTTCCACTCTTTCGGCGGTGGCACCGGCTCTGGCTTCACC
TCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGAAAGAAGTCCAAGCT
TGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCACAGCCGTGGTTGAGC
CCTACAACTCCATCCTGACAACCCATACCACCCTGGAGCACTCCGACTGT
GCCTTCATGGTCGACAACGAGGCCATCTACGACATCTGCCGCCGTAACCT
GGACATCGAGCGCCCGACCTACACCAACCTCAACCGTCTGATCGGCCAGA
TCGTCTCCTCCATCACCGCATCCCTCCGCTTCGACGGTGCCCTGAACGTG
GATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGTATCCACTT
CCCCCTGGCCACCTACGCCCCAGTCATCTCTGCCGAGAAGGCCTACCACG
AGCAGCTGTCCGTTGCTGAGATCACCAACGCCTGCTTCGAGCCAGCCAAC
CAGATGGTGAAGTGCGATCCCCGTCACGGCAAGTACATGGCCTGCTGTAT
GCTGTACCGTGGAGATGTCGTGCCAAAGGACGTCAACGCTGCCATCGCCA
CCATCAAGACCAAGCGCACCATCCAGTTCGTCGACTGGTGCCCCACCGGC
TTCAAGGTCGGCATCAACTACCAGCCACCCACCGTGGTGCCCGGCGGTGA
CTTGGCCAAGGTGCAGCGTGCCGTATGCATGTTGAGCAACACCACCGCCA
TCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGATCTGATGTACGCC
AAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTATGGAGGAGGGAGA
GTTCTCTGAGGCCCGTGAAGATTTGGCCGCCCTGGAGAAGGATTACGAGG
AGGTCGGTGTTGACTCCGTGGATGAGGGGGGCGAGGAGGAGGGAGAGGAG
TATTAGATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGGTGTCCA
GATCGGTAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGATCCAGC
CTGATGGCCAGATGCCGAGCGACAAGACCATCGGCGGCGGGGACGACTCC
TTCAACACGTTCTTCAGCGAGACTGGCGCCGGCAAACATGTGCCCCGTGC
CGTCTTCGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCGTACCGGCA
CATACCGCCAGCTGTTCCACCCCGAGCAGCTCATCACTGGTAAGGAGGAT
GCCGCCAACAACTACGCCCGTGGCCACTACACCATCGGCAAGGAGATCGT
CGACTTGGTCCTGGACCGCATCCGTAAGCTGGCTGACCAGTGCACTGGTC
TGCAGGGCTTCCTCATCTTCCACTCTTTCGGCGGTGGCACCGGCTCTGGC
TTCACCTCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGAAAGAAGTC
CAAGCTTGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCACAGCCGTGG
TTGAGCCCTACAACTCCATCCTGACAACCCATACCACCCTGGAGCACTCC
GACTGTGCCTTCATGGTCGACAACGAGGCCATCTACGACATCTGCCGCCG
TAACCTGGACATCGAGCGCCCGACCTACACCAACCTCAACCGTCTGATCG
GCCAGATCGTCTCCTCCATCACCGCATCCCTCCGCTTCGACGGTGCCCTG
AACGTGGATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCCACGTAT
CCACTTCCCCCTGGCCACCTACGCCCCAGTCATCTCTGCCGAGAAGGCCT
ACCACGAGCAGCTGTCCGTTGCTGAGATCACCAACGCCTGCTTCGAGCCA
GCCAACCAGATGGTGAAGTGCGATCCCCGTCACGGCAAGTACATGGCCTG
CTGTATGCTGTACCGTGGAGATGTCGTGCCAAAGGACGTCAACGCTGCCA
TCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTCGACTGGTGCCCC
ACCGGCTTCAAGGTCGGCATCAACTACCAGCCACCCACCGTGGTGCCCGG
CGGTGACTTGGCCAAGGTGCAGCGTGCCGTATGCATGTTGAGCAACACCA
CCGCCATCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGATCTGATG
TACGCCAAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTATGGAGGA
GGGAGAGTTCTCTGAGGCCCGTGAAGATTTGGCCGCCCTGGAGAAGGATT
ACGAGGAGGTCGGTGTTGACTCCGTGGATGAGGGGGGCGAGGAGGAGGGA
GAGGAGTATTAGATGCGTGAGTGCATCTCTATCCACGTCGGCCAGGCTGG
TGTCCAGATCGGTAACGCCTGCTGGGAGCTGTACTGCTTGGAGCACGGGA
TCCAGCCTGATGGCCAGATGCCGAGCGACAAGACCATCGGCGGCGGGGAC
GACTCCTTCAACACGTTCTTCAGCGAGACTGGCGCCGGCAAACATGTGCC
CCGTGCCGTCTTCGTGGATCTGGAGCCCACCGTAGTCGATGAGGTCCGTA
CCGGCACATACCGCCAGCTGTTCCACCCCGAGCAGCTCATCACTGGTAAG
GAGGATGCCGCCAACAACTACGCCCGTGGCCACTACACCATCGGCAAGGA
GATCGTCGACTTGGTCCTGGACCGCATCCGTAAGCTGGCTGACCAGTGCA
CTGGTCTGCAGGGCTTCCTCATCTTCCACTCTTTCGGCGGTGGCACCGGC
TCTGGCTTCACCTCCCTGTTGATGGAACGTCTGTCCGTCGACTACGGAAA
GAAGTCCAAGCTTGAGTTCGCCATCTACCCAGCCCCTCAGGTGTCCACAG
CCGTGGTTGAGCCCTACAACTCCATCCTGACAACCCATACCACCCTGGAG
CACTCCGACTGTGCCTTCATGGTCGACAACGAGGCCATCTACGACATCTG
CCGCCGTAACCTGGACATCGAGCGCCCGACCTACACCAACCTCAACCGTC
TGATCGGCCAGATCGTCTCCTCCATCACCGCATCCCTCCGCTTCGACGGT
GCCCTGAACGTGGATCTCACTGAGTTCCAGACCAACTTGGTGCCCTACCC
ACGTATCCACTTCCCCCTGGCCACCTACGCCCCAGTCATCTCTGCCGAGA
AGGCCTACCACGAGCAGCTGTCCGTTGCTGAGATCACCAACGCCTGCTTC
GAGCCAGCCAACCAGATGGTGAAGTGCGATCCCCGTCACGGCAAGTACAT
GGCCTGCTGTATGCTGTACCGTGGAGATGTCGTGCCAAAGGACGTCAACG
CTGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTTCGTCGACTGG
TGCCCCACCGGCTTCAAGGTCGGCATCAACTACCAGCCACCCACCGTGGT
GCCCGGCGGTGACTTGGCCAAGGTGCAGCGTGCCGTATGCATGTTGAGCA
ACACCACCGCCATCGCTGAGGCCTGGGCCCGTCTCGACCACAAGTTCGAT
CTGATGTACGCCAAGCGTGCCTTCGTGCACTGGTACGTCGGTGAGGGTAT
GGAGGAGGGAGAGTTCTCTGAGGCCCGTGAAGATTTGGCCGCCCTGGAGA
AGGATTACGAGGAGGTCGGTGTTGACTCCGTGGATGAGGGGGGCGAGGAG
GAGGGAGAGGAGTATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000015 | genome | Sc0000015:4174680..4177030 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95258_evm0 |
| Biotype | protein_coding |
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