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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95271_evm2 >transcript:BL95271_evm2-protein ID=transcript:BL95271_evm2-protein|Name=transcript:BL95271_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=627bp
MAAASSDLPLDKAVVASFDPGEDKMATTSGESREDVTRHSCPLREFAATD
QQQPESHMSTHGEEPAESLPRGKRGQIRTASITSRDAHMATHTGEKPDTC
GDGGHSAGHQSKMASDMKTPTEEKPFAHEECEKPFSCDECGYRTARKGDL
VKHKKTHLVEHIKTGTAFKSNLVQHMKIHSEDMPVRCEKCGYVAASRFDL
KTHMKIHNGKKPFACKECEYRTSQKSDLEKHLKTHTGEKPFKCKECGYRT
AQKCTLVKHMKIHTGEKPFMCGECGFRASSKSKMDIHVRSHTGDKPFACE
ECAYRTADKGSLFKHMKTHTGDKPFACEECEYRAAHKSNLAKHMKETHPG
DDESKKPFMCGECGFRAPWKSRLDVHLRIHTGEKPFACEECEYRASSKGD
LEKHLKTHTGEKPFLCEECGYRTTQKCNLNQHMKTHTGEKPLICGECGYR
ANCKRKMDIHMRIHTGEKPFTCEECGYRAASKTTLVKHIKTHTGEKPFAC
EECAYRTADRSTLVKHMRIHTGEKPFACEECEYRGSRKYNLVQHMKTHSG
EKPEFRCEKCGYLAASRLDLKTHMKTHIGEKPFMCGECGYRASSKSKMDI
HVRIHTGEKPFTCEECGYRAASKXSST Run BLAST on NCBI mRNA from alignment at Sc0000016:2432661..2435343+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95271_evm2 ID=transcript:BL95271_evm2|Name=transcript:BL95271_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2683bp|location=Sequence derived from alignment at Sc0000016:2432661..2435343+ (Branchiostoma lanceolatum)
ATGGCGGCGGCCAGTAGTGACCTTCCTCTGGACAAGGCAGTCGTGGCAAG
CTTCGACCCCGGCGAAGACAAGATGGCGACAACCAGCGGTGAGTCCCGGG
AGGATGTGACCCGACACAGCTGTCCCCTCCGCGAGTTCGCCGCAACGGAC
CAGCAGCAACCTGAGTCCCACATGTCCACTCATGGGGAGGAGCCTGCAGA
AAGTTTACCACGTGGGAAACGCGGCCAAATCAGGACAGCTTCCATAACCA
GCAGGGACGCACACATGGCAACACACACAGGGGAGAAACCAGATACGTGT
GGGGACGGAGGCCACAGTGCGGGTCACCAGAGCAAAATGGCTTCCGATAT
GAAAACCCCCACTGAGGAGAAACCTTTTGCCCATGAGGAATGTGAGTACC
AAACAATTAACAAGAGTAAATTGAAAGAACACATGAAAACTCACACAGGT
GAGAAACCATTCAGGTGTGAAAAATGTGGCTACAGGACAGCTTGCAAGGG
CAACCTGGTCAAGCACAAAAAGATTCACCTGGTAGAACACATCAAGACTG
GCACAGGTGAGAAACTGTTCATATGTAAAGAATGTGGCCTCCAGGAAGCT
GCCCACATCCAAGAGACTCACACAGGCGAGAAACCCTTTGCAGATGAGAT
ATGCAGCTGCAGAGCAGCATCAGGCGATGAGGAACCCTTTATGTGCGGAA
AATGTGGCTATCGGGCAACCAGTAAAAGCAAACTGGACGTCCATACGAAA
ATTCACACTTTAGAGAAAGCCTTTACCTGTATGGAATGTGGGTACCTAAC
AACTGATAAGACTAAATTGAAAGAACACATGAAAACTCACTCAGGTGAGA
AACCATTCAGTTGTGATGAATGTGGCTACAGGACAGCTCGCAAGGGCGAC
CTGGTCAAGCACAAGAAGACTCACCTGGTAGAACACATCAAGACTGGCAC
AGGTGAGAAACTGTTCATATGTAAAGAATGTGGCCTCCAGGAAGCTGCCC
ACATGCAAGAGACTCACACAGGTGAGAAACCCTTTGCAGATGAGATATGC
AGCTGCAGAGCAACATCAGGCGATGAGGAGCCCTTTATGTGCAGAAAATN
TTATGTGCGGAAAATGTGGCTATCGGGCAACCAGTAAAAGCAAACTGGAC
GTCCATACGAAAATTCACACTTTAGAGAAACACTTTGCCTGTATGGAATG
TGGGTACCTAACAGCTCATAAGTATAGATTGAAAATACACACGAAGACTC
ACACAGGTGAGAAACCATTTAGGTGTGATAAATGTGGCCATAGGACAGCT
TTCAAGAGCAACCTGGTTCAGCACATGAAGATTCACTCAGAGGACATGCC
AGTCAGGTGTGAAAAATGTGGCTATGTGGCAGCATCAAGGTTTGACCTTA
AAACACACATGAAGATTCACAACGGTAAGAAGCCCTTCGCTTGCAAGGAA
TGCGAGTACAGGACGTCTCAGAAGAGCGATTTGGAAAAGCACCTCAAGAC
TCACACAGGTGAGAAACCATTCAAGTGCAAGGAATGTGGCTATAGGACAG
CTCAAAAGTGCACCCTGGTCAAGCACATGAAGATTCACACAGGTGAGAAA
CCCTTCATGTGCGGAGAATGTGGCTTTCGGGCATCCAGCAAGAGCAAAAT
GGACATCCACGTGAGAAGTCACACAGGTGACAAACCCTTCGCTTGCGAGG
AATGTGCGTACAGAACAGCTGATAAGGGCAGCCTCTTCAAGCACATGAAA
ACTCACACAGGTGACAAACCCTTCGCTTGCGAGGAATGTGAGTACAGGGC
AGCTCACAAAAGCAACCTAGCCAAGCACATGAAAGAGACTCACCCAGGTG
ATGATGAGAGTAAGAAGCCTTTCATGTGCGGAGAATGTGGCTTTCGGGCA
CCCTGGAAAAGCAGATTGGACGTCCATCTGAGGATTCACACTGGAGAGAA
GCCCTTTGCTTGCGAGGAATGCGAGTACAGGGCATCTAGCAAGGGCGATT
TGGAGAAGCACCTCAAGACTCACACAGGTGAGAAACCATTTTTGTGTGAG
GAATGTGGCTACAGGACAACTCAAAAGTGCAACCTGAACCAGCACATGAA
GACTCACACAGGTGAGAAACCCTTGATATGCGGAGAATGTGGGTATCGGG
CGAATTGCAAACGCAAAATGGACATCCACATGAGGATTCACACTGGGGAG
AAACCCTTCACTTGCGAGGAATGCGGGTACAGAGCAGCTAGCAAGACCAC
CCTCGTCAAACACATAAAGACTCACACAGGTGAGAAACCCTTCGCTTGCG
AGGAATGTGCGTATAGAACAGCTGATAGGAGCACCCTTGTCAAGCACATG
AGGATTCACACAGGTGAGAAACCCTTCGCTTGCGAGGAATGCGAGTACAG
AGGATCTAGAAAGTACAACCTCGTCCAGCACATGAAGACTCACTCAGGGG
AGAAACCAGAATTCAGGTGTGAAAAATGCGGCTACCTGGCAGCATCAAGG
CTTGACCTTAAAACACACATGAAGACTCACATAGGTGAGAAGCCCTTCAT
GTGTGGCGAATGTGGGTATCGGGCGAGCAGTAAAAGCAAAATGGACATCC
ACGTGAGGATTCACACTGGGGAGAAACCCTTCACTTGCGAGGAATGCGGG
TACAGAGCAGCTAGCAAGANGTCAAGCACATGA Coding sequence (CDS) from alignment at Sc0000016:2432661..2435343+ >transcript:BL95271_evm2 ID=transcript:BL95271_evm2|Name=transcript:BL95271_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=5652bp|location=Sequence derived from alignment at Sc0000016:2432661..2435343+ (Branchiostoma lanceolatum)
ATGGCGGCGGCCAGTAGTGACCTTCCTCTGGACAAGGCAGTCGTGGCAAG
CTTCGACCCCGGCGAAGACAAGATGGCGACAACCAGCGGTGAGTCCCGGG
AGGATGTGACCCGACACAGCTGTCCCCTCCGCGAGTTCGCCGCAACGGAC
CAGCAGCAACCTGAGTCCCACATGTCCACTCATGGGGAGGAGCCTGCAGA
AAGTTTACCACGTGGGAAACGCGGCCAAATCAGGACAGCTTCCATAACCA
GCAGGGACGCACACATGGCAACACACACAGGGGAGAAACCAGATACGTGT
GGGGACGGAGGCCACAGTGCGGGTCACCAGAGCAAAATGGCTTCCGATAT
GAAAACCCCCACTGAGGAGAAACCTTTTGCCCATGAGGAATGTGAGAAAC
CATTCAGTTGTGATGAATGTGGCTACAGGACAGCTCGCAAGGGCGACCTG
GTCAAGCACAAGAAGACTCACCTGGTAGAACACATCAAGACTGGCACAGC
TTTCAAGAGCAACCTGGTTCAGCACATGAAGATTCACTCAGAGGACATGC
CAGTCAGGTGTGAAAAATGTGGCTATGTGGCAGCATCAAGGTTTGACCTT
AAAACACACATGAAGATTCACAACGGTAAGAAGCCCTTCGCTTGCAAGGA
ATGCGAGTACAGGACGTCTCAGAAGAGCGATTTGGAAAAGCACCTCAAGA
CTCACACAGGTGAGAAACCATTCAAGTGCAAGGAATGTGGCTATAGGACA
GCTCAAAAGTGCACCCTGGTCAAGCACATGAAGATTCACACAGGTGAGAA
ACCCTTCATGTGCGGAGAATGTGGCTTTCGGGCATCCAGCAAGAGCAAAA
TGGACATCCACGTGAGAAGTCACACAGGTGACAAACCCTTCGCTTGCGAG
GAATGTGCGTACAGAACAGCTGATAAGGGCAGCCTCTTCAAGCACATGAA
AACTCACACAGGTGACAAACCCTTCGCTTGCGAGGAATGTGAGTACAGGG
CAGCTCACAAAAGCAACCTAGCCAAGCACATGAAAGAGACTCACCCAGGT
GATGATGAGAGTAAGAAGCCTTTCATGTGCGGAGAATGTGGCTTTCGGGC
ACCCTGGAAAAGCAGATTGGACGTCCATCTGAGGATTCACACTGGAGAGA
AGCCCTTTGCTTGCGAGGAATGCGAGTACAGGGCATCTAGCAAGGGCGAT
TTGGAGAAGCACCTCAAGACTCACACAGGTGAGAAACCATTTTTGTGTGA
GGAATGTGGCTACAGGACAACTCAAAAGTGCAACCTGAACCAGCACATGA
AGACTCACACAGGTGAGAAACCCTTGATATGCGGAGAATGTGGGTATCGG
GCGAATTGCAAACGCAAAATGGACATCCACATGAGGATTCACACTGGGGA
GAAACCCTTCACTTGCGAGGAATGCGGGTACAGAGCAGCTAGCAAGACCA
CCCTCGTCAAACACATAAAGACTCACACAGGTGAGAAACCCTTCGCTTGC
GAGGAATGTGCGTATAGAACAGCTGATAGGAGCACCCTTGTCAAGCACAT
GAGGATTCACACAGGTGAGAAACCCTTCGCTTGCGAGGAATGCGAGTACA
GAGGATCTAGAAAGTACAACCTCGTCCAGCACATGAAGACTCACTCAGGG
GAGAAACCAGAATTCAGGTGTGAAAAATGCGGCTACCTGGCAGCATCAAG
GCTTGACCTTAAAACACACATGAAGACTCACATAGGTGAGAAGCCCTTCA
TGTGTGGCGAATGTGGGTATCGGGCGAGCAGTAAAAGCAAAATGGACATC
CACGTGAGGATTCACACTGGGGAGAAACCCTTCACTTGCGAGGAATGCGG
GTACAGAGCAGCTAGCAAGANGTCAAGCACATGAATGGCGGCGGCCAGTA
GTGACCTTCCTCTGGACAAGGCAGTCGTGGCAAGCTTCGACCCCGGCGAA
GACAAGATGGCGACAACCAGCGGTGAGTCCCGGGAGGATGTGACCCGACA
CAGCTGTCCCCTCCGCGAGTTCGCCGCAACGGACCAGCAGCAACCTGAGT
CCCACATGTCCACTCATGGGGAGGAGCCTGCAGAAAGTTTACCACGTGGG
AAACGCGGCCAAATCAGGACAGCTTCCATAACCAGCAGGGACGCACACAT
GGCAACACACACAGGGGAGAAACCAGATACGTGTGGGGACGGAGGCCACA
GTGCGGGTCACCAGAGCAAAATGGCTTCCGATATGAAAACCCCCACTGAG
GAGAAACCTTTTGCCCATGAGGAATGTGAGAAACCATTCAGTTGTGATGA
ATGTGGCTACAGGACAGCTCGCAAGGGCGACCTGGTCAAGCACAAGAAGA
CTCACCTGGTAGAACACATCAAGACTGGCACAGCTTTCAAGAGCAACCTG
GTTCAGCACATGAAGATTCACTCAGAGGACATGCCAGTCAGGTGTGAAAA
ATGTGGCTATGTGGCAGCATCAAGGTTTGACCTTAAAACACACATGAAGA
TTCACAACGGTAAGAAGCCCTTCGCTTGCAAGGAATGCGAGTACAGGACG
TCTCAGAAGAGCGATTTGGAAAAGCACCTCAAGACTCACACAGGTGAGAA
ACCATTCAAGTGCAAGGAATGTGGCTATAGGACAGCTCAAAAGTGCACCC
TGGTCAAGCACATGAAGATTCACACAGGTGAGAAACCCTTCATGTGCGGA
GAATGTGGCTTTCGGGCATCCAGCAAGAGCAAAATGGACATCCACGTGAG
AAGTCACACAGGTGACAAACCCTTCGCTTGCGAGGAATGTGCGTACAGAA
CAGCTGATAAGGGCAGCCTCTTCAAGCACATGAAAACTCACACAGGTGAC
AAACCCTTCGCTTGCGAGGAATGTGAGTACAGGGCAGCTCACAAAAGCAA
CCTAGCCAAGCACATGAAAGAGACTCACCCAGGTGATGATGAGAGTAAGA
AGCCTTTCATGTGCGGAGAATGTGGCTTTCGGGCACCCTGGAAAAGCAGA
TTGGACGTCCATCTGAGGATTCACACTGGAGAGAAGCCCTTTGCTTGCGA
GGAATGCGAGTACAGGGCATCTAGCAAGGGCGATTTGGAGAAGCACCTCA
AGACTCACACAGGTGAGAAACCATTTTTGTGTGAGGAATGTGGCTACAGG
ACAACTCAAAAGTGCAACCTGAACCAGCACATGAAGACTCACACAGGTGA
GAAACCCTTGATATGCGGAGAATGTGGGTATCGGGCGAATTGCAAACGCA
AAATGGACATCCACATGAGGATTCACACTGGGGAGAAACCCTTCACTTGC
GAGGAATGCGGGTACAGAGCAGCTAGCAAGACCACCCTCGTCAAACACAT
AAAGACTCACACAGGTGAGAAACCCTTCGCTTGCGAGGAATGTGCGTATA
GAACAGCTGATAGGAGCACCCTTGTCAAGCACATGAGGATTCACACAGGT
GAGAAACCCTTCGCTTGCGAGGAATGCGAGTACAGAGGATCTAGAAAGTA
CAACCTCGTCCAGCACATGAAGACTCACTCAGGGGAGAAACCAGAATTCA
GGTGTGAAAAATGCGGCTACCTGGCAGCATCAAGGCTTGACCTTAAAACA
CACATGAAGACTCACATAGGTGAGAAGCCCTTCATGTGTGGCGAATGTGG
GTATCGGGCGAGCAGTAAAAGCAAAATGGACATCCACGTGAGGATTCACA
CTGGGGAGAAACCCTTCACTTGCGAGGAATGCGGGTACAGAGCAGCTAGC
AAGANGTCAAGCACATGAATGGCGGCGGCCAGTAGTGACCTTCCTCTGGA
CAAGGCAGTCGTGGCAAGCTTCGACCCCGGCGAAGACAAGATGGCGACAA
CCAGCGGTGAGTCCCGGGAGGATGTGACCCGACACAGCTGTCCCCTCCGC
GAGTTCGCCGCAACGGACCAGCAGCAACCTGAGTCCCACATGTCCACTCA
TGGGGAGGAGCCTGCAGAAAGTTTACCACGTGGGAAACGCGGCCAAATCA
GGACAGCTTCCATAACCAGCAGGGACGCACACATGGCAACACACACAGGG
GAGAAACCAGATACGTGTGGGGACGGAGGCCACAGTGCGGGTCACCAGAG
CAAAATGGCTTCCGATATGAAAACCCCCACTGAGGAGAAACCTTTTGCCC
ATGAGGAATGTGAGAAACCATTCAGTTGTGATGAATGTGGCTACAGGACA
GCTCGCAAGGGCGACCTGGTCAAGCACAAGAAGACTCACCTGGTAGAACA
CATCAAGACTGGCACAGCTTTCAAGAGCAACCTGGTTCAGCACATGAAGA
TTCACTCAGAGGACATGCCAGTCAGGTGTGAAAAATGTGGCTATGTGGCA
GCATCAAGGTTTGACCTTAAAACACACATGAAGATTCACAACGGTAAGAA
GCCCTTCGCTTGCAAGGAATGCGAGTACAGGACGTCTCAGAAGAGCGATT
TGGAAAAGCACCTCAAGACTCACACAGGTGAGAAACCATTCAAGTGCAAG
GAATGTGGCTATAGGACAGCTCAAAAGTGCACCCTGGTCAAGCACATGAA
GATTCACACAGGTGAGAAACCCTTCATGTGCGGAGAATGTGGCTTTCGGG
CATCCAGCAAGAGCAAAATGGACATCCACGTGAGAAGTCACACAGGTGAC
AAACCCTTCGCTTGCGAGGAATGTGCGTACAGAACAGCTGATAAGGGCAG
CCTCTTCAAGCACATGAAAACTCACACAGGTGACAAACCCTTCGCTTGCG
AGGAATGTGAGTACAGGGCAGCTCACAAAAGCAACCTAGCCAAGCACATG
AAAGAGACTCACCCAGGTGATGATGAGAGTAAGAAGCCTTTCATGTGCGG
AGAATGTGGCTTTCGGGCACCCTGGAAAAGCAGATTGGACGTCCATCTGA
GGATTCACACTGGAGAGAAGCCCTTTGCTTGCGAGGAATGCGAGTACAGG
GCATCTAGCAAGGGCGATTTGGAGAAGCACCTCAAGACTCACACAGGTGA
GAAACCATTTTTGTGTGAGGAATGTGGCTACAGGACAACTCAAAAGTGCA
ACCTGAACCAGCACATGAAGACTCACACAGGTGAGAAACCCTTGATATGC
GGAGAATGTGGGTATCGGGCGAATTGCAAACGCAAAATGGACATCCACAT
GAGGATTCACACTGGGGAGAAACCCTTCACTTGCGAGGAATGCGGGTACA
GAGCAGCTAGCAAGACCACCCTCGTCAAACACATAAAGACTCACACAGGT
GAGAAACCCTTCGCTTGCGAGGAATGTGCGTATAGAACAGCTGATAGGAG
CACCCTTGTCAAGCACATGAGGATTCACACAGGTGAGAAACCCTTCGCTT
GCGAGGAATGCGAGTACAGAGGATCTAGAAAGTACAACCTCGTCCAGCAC
ATGAAGACTCACTCAGGGGAGAAACCAGAATTCAGGTGTGAAAAATGCGG
CTACCTGGCAGCATCAAGGCTTGACCTTAAAACACACATGAAGACTCACA
TAGGTGAGAAGCCCTTCATGTGTGGCGAATGTGGGTATCGGGCGAGCAGT
AAAAGCAAAATGGACATCCACGTGAGGATTCACACTGGGGAGAAACCCTT
CACTTGCGAGGAATGCGGGTACAGAGCAGCTAGCAAGANGTCAAGCACAT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:2432661..2435343 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95271_evm2 |
| Biotype | protein_coding |
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