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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95336_evm0 >transcript:BL95336_evm0-protein ID=transcript:BL95336_evm0-protein|Name=transcript:BL95336_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=250bp
MCRLYSRHPSDAHPADQPALWDSRVLSTLMRSEIALPYSVRKVGINADSL
RMTERYDILTSSLKPRPIAFISTCSPGGCNNLAPVSFCMPVTSDPASLAF
SITWKRDGSPKDTLTNILSTSHFVVNHTSLPIMPKVYVASQEFGPDVDEF
EVAGLTPVPSVCGPAPHVLESPVSLECRLLHTLPVGEKRHGGTTVVIGQL
VHVHISESCLGEDGIRPDKLQSVSRLGGMSYGIDQKTFNIVDGIWDRKKW Run BLAST on NCBI mRNA from alignment at Sc0000023:476475..480734- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95336_evm0 ID=transcript:BL95336_evm0|Name=transcript:BL95336_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4260bp|location=Sequence derived from alignment at Sc0000023:476475..480734- (Branchiostoma lanceolatum)
ATGTGCAGACTGTACAGCCGGCACCCTAGTGACGCCCATCCGGCGGACCA
GCCCGCACTGTGGGACAGCCGAGTCCTGTCCACCCTCATGCGGTCTGAAA
TTGCGCTACCGTACAGCGTCAGAAAGGTACGCCAGGTCACGATAGACTAG
TAATTGTTTTCTTTACATCCTTCCATTCGGTGTATTGGGGCGACACCCAT
CAGTTTTGATTCTAACGTCCTTGGGCCAATGCAGGAGGGGGCTTGTCCAC
TGGTCCAACTCTCATACTCTTCTGATGAGTATCAGCACTAAGTACTAATC
ATCAGGCGAGTAGCCGTCAGCACGGCGCGACTTTCAAACGATGGGAGAGC
CCTGATTGTGACGGACTGGTGAAAAACAAGTTAGAACTTGACTTTGGGGT
ATATCTAGCAAAGTATTATAGGTTTTGTCAATTTTAAGTGTAGCTTTCCT
TGAATTTCTTGTTGGTCTTGCTCAGGTCCCGGTCCCGGCTGTGTCGCTCA
TCCGACATGCACGGTACCGGAAAGGGTCGCAGTCCTTGGGACTGGACGTT
AAGCCGTGGTCCGCTGTTCATCGTGCTTGTCGAAAAGAGCTAGGGGAATT
TCTCCGGTACAATGAACCTATAAATACTGTACATAGCGTCTGTCTTCTCT
GTCATGACCAGTGGAAGATTAGCTCATCTGTTCATTGAGTTCATTTGAGG
TAAACTGGTTCGAGATTATTTTCCTTTTCCTTTTAGGTCGGCATCAACGC
CGACTCCCTTCGCATGACCGAGAGATACGACATCCTGACCTCCTCCCTCA
AGCCGCGCCCCATCGCCTTCATCAGCACCTGCTCACCGGGAGGGTGCAAC
AACCTGGCGCCCGTCAGCTTCTGTATGCCGGTCACCAGCGACCCGGCCAG
CCTCGCTTTCTCTATCACATGGTTAGTGACAAACTTTGATCATTACTTCA
TCTCGAAACAAGGGAATGGAGTATCTATGTTTTTGTGTGTCTGCTTGTTT
GTATGTCTCTGTGTGTGTGTGTGTTTGTGTGTGTGTCTGCGTATGTGTGT
GTGTGTGAGTGAGTGTGTGTGTGTTTGTTTGTGTGTGTGTGTGTGCGTGC
GTGCGTGAGTGTGTATGTGTTGTGTCTGCGTGTGTGTGTGTGTCTGCGTG
TGTGTGTGTGCGCGCGCTCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGT
GTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGGTACATCAGAAGAAGGT
TACAATCCTCATCCAACTTCTGCTTGGAGAGTACCTGAGAGTTGCAAGAT
GTCCAAAACCGTTTTCGCGGATGTAGTTGTATCAGCCATCTCTACTGGTG
AAAAGGTTACTGGTTGTGAGAGGTCATGAAGGTACAATAAAGGTCTCCAT
TCATTCATTCATTCATTCATTCATTATTATTTGGTAACACGGAAGTATAT
AGAATCTGGATCACCCGATGGTACTGGATTTATATGTGTGTGTACCTTGA
TTTGGTCAGGTATTCCTTACATATGAATAATCCTAAACGTACTGCGGAGA
ATTGTCCCACACTAACTGTCAGGTTTATAATGCATTTATCAAAGGAAGCG
CGACGGCAGTCCGAAGGACACTCTTACCAATATCCTATCCACCAGCCACT
TTGTCGTCAACCATACCAGTCTACCTATTATGCCAAAGGTGTACGTTGGT
AAGTGAATTGGGAGGCGTTTAAAAGACCGGTGAGTTGGGAATGGCGCTAG
TAGTGTGGTGAACTTGATGTCAGGTATATACGATGGTTACGCCAAACATT
CCAGTGGGACGGCGAACTCGCTGCGACTGAGCGATTTGACAGAGCGCTTA
ACGAATTTCATAGATTAAAAAAAAGGATGTTTTTACGCTTTGTGAGATTT
GTTGTCTTTTCAGTCATACTTTTACATTTCGCACAATATTCCAATTATGA
AGTTAAGGGTTACAAAAATTCAATTTTGGTCACAGTGAGTTCTCAGCGAG
ATCGCCGTCTAGTGGAATGGGGGCCTTTATATAAGCTTCGTAGTGAAAAA
TGCTGGGACTCCTGGGAGCATGGTTCCACCGCGAAATACTCTCTAAAAAC
TATGTCTCATTTGTAATGGTGATCTATTATGGCTGCTTTGAATATCGTAA
CGCTTGTACCCCAGTCGTCCCACGGGTAAAGAAATTTTGGCTCGATGCAT
GTTGGTGTCAGTTTAATGCCCCTGTCACACAGAAAAATCGAGTCTGACAG
CTCTAAAACTTTTTTATTAATATGCCCGGTGTTCTCTCGATTATCGCACG
ATTTTTTGAGATACACAGAGTCTCTGGCGATTTTTCAAACTCGGCAACCT
CCTGTAGATCAACAAATACGGCCGAAACTCGTCGACTGTGTGACAGGGGC
TAAAAGAAAGAGGGTCTGAAATAACAGTTGCGTTTCCATTTCCAGTTTCC
CCTGGAGTTTGGCCTTGTTGTGGATGAGTTGGAAGAGCAGGTCGTACGTC
AGACATATTTACAAGTTTCCTAAGACAAAGTTGTTCCGTTTTTCCGCCTG
TAGCGTCCCAGGAGTTCGGTCCCGATGTGGACGAGTTTGAGGTGGCGGGC
CTGACGCCCGTGCCGTCCGTGTGCGGCCCGGCCCCGCACGTGCTGGAGTC
GCCGGTCTCTCTGGAGTGCAGGCTGCTCCACACGCTCCCTGTGGGCGAGA
AGAGGCACGGAGGGACCACCGTCGTCATCGGGCAGGTGGGAAACTTGACA
AAGGTTTCGATGTTTTATCTCAGTACTAGCATGTAAACAATACTGCACAT
GTAAGTTATTCAGGACATATGATGCTAATCAACTTACAAAAGAGTTTTGT
AAACGGGATGCTTTTGTAGACCAAATGACCGTCGTCATTGGGTAAGTGGG
AAACTTGATAAAAGATTTGATACCAAAACGGAATGTTTCGGTAAACCAAA
AGACCGTCGTCATCGGAAAGATGGGAAACGTGACAAAAGTTGTTAATAAA
TTATCGCATTACCCTCATTACGAATATAATACTGCAGATGTACGTGTACT
CGGCATATATAGGATTCATGATGCTAGTCAACGAAAAAAAGATTTTGTAA
ACGGGATGTTTTTTGTAAACTAAAAACGGGATGTTTTTGTAAACCAAATG
ACCGTTTGACAGGTGACAAAAGTTATGAAAACAGAAGCCGAAGTAGCCTT
GCATAGGTAAAACAATGAAGTTCTATTACTAGTAATATAGAACATCCTTG
GGTAAAGTAGCTATGGATAAGGTAATTGTTTGACGTTTGGTGATGTACAG
AATTTAAACCCGTAAAAATTCACACGTTGATTGTATTCCATAGCAGTTCT
TACTGATTTTAACCTCCTTGCTAGAATAGTCCCTTGCTATACATTTGTAA
CCATTATTATCTTAGATTGTCTGAATATTTTTGGCACAATACTTTGGGCC
CCCTAGCGGCTTCCAACGGTACTGCAGCGGGACTTCTTGTTTTGACATCT
CGTGTTTTGACATCTCGTGTTCTGCACATGATACGGTCTTAATTTCTAGT
GGTAAATAGCTCTTGGGGCAGAAAATGTGGTATAGGTTTGAGCCACCTAA
CGGCTTTTTTTAAACACAGGAGGACGTTTTGCTTCAGACTTTAAAAGAGA
ATTACTCAAGAAGGGCTTGATGGATGGTCATGATTTTTGGTGTGTAACTA
GCATGAGGTACGATCTACATAATCAGGCTCTAATTATGCAAATCAGAACC
TAATTTATGAGGAAAATTGATTGTTTCTACAGCTTGTCCATGTTCATATC
TCGAAGACCTGCCTTGATATCTTGTGTTCTGGTCACGTCATGTTAAGAGC
GTGATTTTTGAGTGGCATACAAACCTCTTGTTGTATATTATATCTTTCTA
AAGCTAGTCCATGTCCACATCCCGGAGAGCTGCTTTGATATTTCGTGGTC
TTGACATGTTACAGTCGTGTTTTTTTAATTGTTGTTTATCATATCGTTCT
ACAGCTTGTCCATGTGCACATCTCGGAGAGCTGTCTCGGCGAAGACGGGA
TCCGCCCCGACAAGCTGCAGTCCGTGTCCCGTCTGGGGGGCATGAGCTAC
GGCATCGACCAGAAAACATTCAACATCGTCGACGGGATATGGGATAGGAA
GAAGTGGTGA Coding sequence (CDS) from alignment at Sc0000023:476475..480734- >transcript:BL95336_evm0 ID=transcript:BL95336_evm0|Name=transcript:BL95336_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3765bp|location=Sequence derived from alignment at Sc0000023:476475..480734- (Branchiostoma lanceolatum)
ATGTGCAGACTGTACAGCCGGCACCCTAGTGACGCCCATCCGGCGGACCA
GCCCGCACTGTGGGACAGCCGAGTCCTGTCCACCCTCATGCGGTCTGAAA
TTGCGCTACCGTACAGCGTCAGAAAGGTCGGCATCAACGCCGACTCCCTT
CGCATGACCGAGAGATACGACATCCTGACCTCCTCCCTCAAGCCGCGCCC
CATCGCCTTCATCAGCACCTGCTCACCGGGAGGGTGCAACAACCTGGCGC
CCGTCAGCTTCTGTATGCCGGTCACCAGCGACCCGGCCAGCCTCGCTTTC
TCTATCACATGGAAGCGCGACGGCAGTCCGAAGGACACTCTTACCAATAT
CCTATCCACCAGCCACTTTGTCGTCAACCATACCAGTCTACCTATTATGC
CAAAGGTGTACGTTGCGTCCCAGGAGTTCGGTCCCGATGTGGACGAGTTT
GAGGTGGCGGGCCTGACGCCCGTGCCGTCCGTGTGCGGCCCGGCCCCGCA
CGTGCTGGAGTCGCCGGTCTCTCTGGAGTGCAGGCTGCTCCACACGCTCC
CTGTGGGCGAGAAGAGGCACGGAGGGACCACCGTCGTCATCGGGCAGCTT
GTCCATGTGCACATCTCGGAGAGCTGTCTCGGCGAAGACGGGATCCGCCC
CGACAAGCTGCAGTCCGTGTCCCGTCTGGGGGGCATGAGCTACGGCATCG
ACCAGAAAACATTCAACATCGTCGACGGGATATGGGATAGGAAGAAGTGG
TGAATGTGCAGACTGTACAGCCGGCACCCTAGTGACGCCCATCCGGCGGA
CCAGCCCGCACTGTGGGACAGCCGAGTCCTGTCCACCCTCATGCGGTCTG
AAATTGCGCTACCGTACAGCGTCAGAAAGGTCGGCATCAACGCCGACTCC
CTTCGCATGACCGAGAGATACGACATCCTGACCTCCTCCCTCAAGCCGCG
CCCCATCGCCTTCATCAGCACCTGCTCACCGGGAGGGTGCAACAACCTGG
CGCCCGTCAGCTTCTGTATGCCGGTCACCAGCGACCCGGCCAGCCTCGCT
TTCTCTATCACATGGAAGCGCGACGGCAGTCCGAAGGACACTCTTACCAA
TATCCTATCCACCAGCCACTTTGTCGTCAACCATACCAGTCTACCTATTA
TGCCAAAGGTGTACGTTGCGTCCCAGGAGTTCGGTCCCGATGTGGACGAG
TTTGAGGTGGCGGGCCTGACGCCCGTGCCGTCCGTGTGCGGCCCGGCCCC
GCACGTGCTGGAGTCGCCGGTCTCTCTGGAGTGCAGGCTGCTCCACACGC
TCCCTGTGGGCGAGAAGAGGCACGGAGGGACCACCGTCGTCATCGGGCAG
CTTGTCCATGTGCACATCTCGGAGAGCTGTCTCGGCGAAGACGGGATCCG
CCCCGACAAGCTGCAGTCCGTGTCCCGTCTGGGGGGCATGAGCTACGGCA
TCGACCAGAAAACATTCAACATCGTCGACGGGATATGGGATAGGAAGAAG
TGGTGAATGTGCAGACTGTACAGCCGGCACCCTAGTGACGCCCATCCGGC
GGACCAGCCCGCACTGTGGGACAGCCGAGTCCTGTCCACCCTCATGCGGT
CTGAAATTGCGCTACCGTACAGCGTCAGAAAGGTCGGCATCAACGCCGAC
TCCCTTCGCATGACCGAGAGATACGACATCCTGACCTCCTCCCTCAAGCC
GCGCCCCATCGCCTTCATCAGCACCTGCTCACCGGGAGGGTGCAACAACC
TGGCGCCCGTCAGCTTCTGTATGCCGGTCACCAGCGACCCGGCCAGCCTC
GCTTTCTCTATCACATGGAAGCGCGACGGCAGTCCGAAGGACACTCTTAC
CAATATCCTATCCACCAGCCACTTTGTCGTCAACCATACCAGTCTACCTA
TTATGCCAAAGGTGTACGTTGCGTCCCAGGAGTTCGGTCCCGATGTGGAC
GAGTTTGAGGTGGCGGGCCTGACGCCCGTGCCGTCCGTGTGCGGCCCGGC
CCCGCACGTGCTGGAGTCGCCGGTCTCTCTGGAGTGCAGGCTGCTCCACA
CGCTCCCTGTGGGCGAGAAGAGGCACGGAGGGACCACCGTCGTCATCGGG
CAGCTTGTCCATGTGCACATCTCGGAGAGCTGTCTCGGCGAAGACGGGAT
CCGCCCCGACAAGCTGCAGTCCGTGTCCCGTCTGGGGGGCATGAGCTACG
GCATCGACCAGAAAACATTCAACATCGTCGACGGGATATGGGATAGGAAG
AAGTGGTGAATGTGCAGACTGTACAGCCGGCACCCTAGTGACGCCCATCC
GGCGGACCAGCCCGCACTGTGGGACAGCCGAGTCCTGTCCACCCTCATGC
GGTCTGAAATTGCGCTACCGTACAGCGTCAGAAAGGTCGGCATCAACGCC
GACTCCCTTCGCATGACCGAGAGATACGACATCCTGACCTCCTCCCTCAA
GCCGCGCCCCATCGCCTTCATCAGCACCTGCTCACCGGGAGGGTGCAACA
ACCTGGCGCCCGTCAGCTTCTGTATGCCGGTCACCAGCGACCCGGCCAGC
CTCGCTTTCTCTATCACATGGAAGCGCGACGGCAGTCCGAAGGACACTCT
TACCAATATCCTATCCACCAGCCACTTTGTCGTCAACCATACCAGTCTAC
CTATTATGCCAAAGGTGTACGTTGCGTCCCAGGAGTTCGGTCCCGATGTG
GACGAGTTTGAGGTGGCGGGCCTGACGCCCGTGCCGTCCGTGTGCGGCCC
GGCCCCGCACGTGCTGGAGTCGCCGGTCTCTCTGGAGTGCAGGCTGCTCC
ACACGCTCCCTGTGGGCGAGAAGAGGCACGGAGGGACCACCGTCGTCATC
GGGCAGCTTGTCCATGTGCACATCTCGGAGAGCTGTCTCGGCGAAGACGG
GATCCGCCCCGACAAGCTGCAGTCCGTGTCCCGTCTGGGGGGCATGAGCT
ACGGCATCGACCAGAAAACATTCAACATCGTCGACGGGATATGGGATAGG
AAGAAGTGGTGAATGTGCAGACTGTACAGCCGGCACCCTAGTGACGCCCA
TCCGGCGGACCAGCCCGCACTGTGGGACAGCCGAGTCCTGTCCACCCTCA
TGCGGTCTGAAATTGCGCTACCGTACAGCGTCAGAAAGGTCGGCATCAAC
GCCGACTCCCTTCGCATGACCGAGAGATACGACATCCTGACCTCCTCCCT
CAAGCCGCGCCCCATCGCCTTCATCAGCACCTGCTCACCGGGAGGGTGCA
ACAACCTGGCGCCCGTCAGCTTCTGTATGCCGGTCACCAGCGACCCGGCC
AGCCTCGCTTTCTCTATCACATGGAAGCGCGACGGCAGTCCGAAGGACAC
TCTTACCAATATCCTATCCACCAGCCACTTTGTCGTCAACCATACCAGTC
TACCTATTATGCCAAAGGTGTACGTTGCGTCCCAGGAGTTCGGTCCCGAT
GTGGACGAGTTTGAGGTGGCGGGCCTGACGCCCGTGCCGTCCGTGTGCGG
CCCGGCCCCGCACGTGCTGGAGTCGCCGGTCTCTCTGGAGTGCAGGCTGC
TCCACACGCTCCCTGTGGGCGAGAAGAGGCACGGAGGGACCACCGTCGTC
ATCGGGCAGCTTGTCCATGTGCACATCTCGGAGAGCTGTCTCGGCGAAGA
CGGGATCCGCCCCGACAAGCTGCAGTCCGTGTCCCGTCTGGGGGGCATGA
GCTACGGCATCGACCAGAAAACATTCAACATCGTCGACGGGATATGGGAT
AGGAAGAAGTGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000023 | genome | Sc0000023:476475..480734 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95336_evm0 |
| Biotype | protein_coding |
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